Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:58:20 (1760268): wrapper (7.7.26015): starting
19:58:20 (1760268): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 19:58:20] Arguments: --nthreads 10
[2025-06-03 19:58:20] Threads: 10
[2025-06-03 19:58:20] Checking for CVMFS
[2025-06-03 19:58:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 19:58:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 19:58:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 19:58:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 19:58:20] 2.12.6.0 551375 178253 301876 146761 1 258 16878643 32935937 13796 130560 1 374376807 99.660 341383227 26780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 19:58:20] CVMFS is ok
[2025-06-03 19:58:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:58:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:58:20] Further information can be found at the LHC@home message board.
[2025-06-03 19:58:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:58:20] Checking for apptainer binary...
[2025-06-03 19:58:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 19:58:20] Running /usr/bin/apptainer --version
[2025-06-03 19:58:20] apptainer version 1.4.1-1.el9
[2025-06-03 19:58:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:58:20] c-4-40.aglt2.org
[2025-06-03 19:58:20] apptainer works
[2025-06-03 19:58:20] Set ATHENA_PROC_NUMBER=10
[2025-06-03 19:58:20] Set ATHENA_CORE_NUMBER=10
[2025-06-03 19:58:20] Starting ATLAS job with PandaID=6678014521
[2025-06-03 19:58:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:22:24]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:22:24]  mtime=0
[2025-06-03 21:22:24]  protocol_id=None
[2025-06-03 21:22:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 21:22:24]  replicas=None
[2025-06-03 21:22:24]  scope=mc23_13p6TeV
[2025-06-03 21:22:24]  status=None
[2025-06-03 21:22:24]  status_code=0
[2025-06-03 21:22:24]  storage_token=
[2025-06-03 21:22:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678014521/log.45006595._044146.job.log.tgz.1
[2025-06-03 21:22:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/3c/log.45006595._044146.job.log.tgz.1
[2025-06-03 21:22:24]  workdir=None
[2025-06-03 21:22:24] ]
[2025-06-03 21:22:24] 2025-06-04 01:21:55,725 | INFO     | transferring file log.45006595._044146.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678014521/log.45006595._044146.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:22:24] 2025-06-04 01:21:55,725 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678014521/log.45006595._044146.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._044146.job
[2025-06-03 21:22:24] 2025-06-04 01:21:55,745 | INFO     | adding to output.list: log.45006595._044146.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/3c/log.45006595._044146.job.log.tg
[2025-06-03 21:22:24] 2025-06-04 01:21:55,747 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:22:24] 2025-06-04 01:21:55,747 | INFO     | summary of transferred files:
[2025-06-03 21:22:24] 2025-06-04 01:21:55,747 | INFO     |  -- lfn=log.45006595._044146.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:22:24] 2025-06-04 01:21:55,747 | INFO     | stage-out finished correctly
[2025-06-03 21:22:24] 2025-06-04 01:21:57,236 | WARNING  | process 1771679 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 21:22:24] 2025-06-04 01:21:57,237 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678014521/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:22:24] 2025-06-04 01:21:57,552 | INFO     | number of running child processes to parent process 1771679: 1
[2025-06-03 21:22:24] 2025-06-04 01:21:57,553 | INFO     | maximum number of monitored processes: 6
[2025-06-03 21:22:24] 2025-06-04 01:21:58,212 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:22:24] 2025-06-04 01:21:59,098 | INFO     | job 6678014521 has state=finished
[2025-06-03 21:22:24] 2025-06-04 01:21:59,099 | INFO     | preparing for final server update for job 6678014521 in state='finished'
[2025-06-03 21:22:24] 2025-06-04 01:21:59,099 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:22:24] 2025-06-04 01:21:59,099 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:22:24] 2025-06-04 01:21:59,100 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:22:24] 2025-06-04 01:21:59,100 | INFO     | job 6678014521 has finished - writing final server update
[2025-06-03 21:22:24] 2025-06-04 01:21:59,100 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:22:24] 2025-06-04 01:21:59,115 | INFO     | executing command: lscpu
[2025-06-03 21:22:24] 2025-06-04 01:21:59,185 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:22:24] 2025-06-04 01:22:00,055 | INFO     | monitor loop #367: job 0:6678014521 is in state 'finished'
[2025-06-03 21:22:24] 2025-06-04 01:22:00,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:22:24] 2025-06-04 01:22:02,558 | INFO     | monitor loop #368: job 0:6678014521 is in state 'finished'
[2025-06-03 21:22:24] 2025-06-04 01:22:02,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:22:24] 2025-06-04 01:22:03,366 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:22:24] 2025-06-04 01:22:03,366 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678014521/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:22:24] 2025-06-04 01:22:03,367 | INFO     | extracted standard info from prmon json
[2025-06-03 21:22:24] 2025-06-04 01:22:03,367 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:22:24] 2025-06-04 01:22:03,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:22:24] 2025-06-04 01:22:03,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:22:24] 2025-06-04 01:22:03,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:22:24] 2025-06-04 01:22:03,370 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:22:24] 2025-06-04 01:22:03,371 | INFO     | sum of square deviations: 130793150.0
[2025-06-03 21:22:24] 2025-06-04 01:22:03,371 | INFO     | sum of deviations: 2709746514.0000005
[2025-06-03 21:22:24] 2025-06-04 01:22:03,372 | INFO     | mean x: 1748997701.0
[2025-06-03 21:22:24] 2025-06-04 01:22:03,372 | INFO     | mean y: 2313761.986666667
[2025-06-03 21:22:24] 2025-06-04 01:22:03,372 | INFO     | -- intersect: -36233073360.95338
[2025-06-03 21:22:24] 2025-06-04 01:22:03,372 | INFO     | intersect: -36233073360.95338
[2025-06-03 21:22:24] 2025-06-04 01:22:03,372 | INFO     | chi2: 0.9230344396360108
[2025-06-03 21:22:24] 2025-06-04 01:22:03,372 | INFO     | -- intersect: -36233073360.95338
[2025-06-03 21:22:24] 2025-06-04 01:22:03,372 | INFO     | current memory leak: 20.72 B/s (using 75 data points, chi2=0.92)
[2025-06-03 21:22:24] 2025-06-04 01:22:03,373 | INFO     | ..............................
[2025-06-03 21:22:24] 2025-06-04 01:22:03,373 | INFO     | . Timing measurements:
[2025-06-03 21:22:24] 2025-06-04 01:22:03,373 | INFO     | . get job = 0 s
[2025-06-03 21:22:24] 2025-06-04 01:22:03,373 | INFO     | . initial setup = 2 s
[2025-06-03 21:22:24] 2025-06-04 01:22:03,374 | INFO     | . payload setup = 7 s
[2025-06-03 21:22:24] 2025-06-04 01:22:03,374 | INFO     | . stage-in = 0 s
[2025-06-03 21:22:24] 2025-06-04 01:22:03,374 | INFO     | . payload execution = 4976 s
[2025-06-03 21:22:24] 2025-06-04 01:22:03,374 | INFO     | . stage-out = 0 s
[2025-06-03 21:22:24] 2025-06-04 01:22:03,374 | INFO     | . log creation = 0 s
[2025-06-03 21:22:24] 2025-06-04 01:22:03,374 | INFO     | ..............................
[2025-06-03 21:22:24] 2025-06-04 01:22:03,488 | INFO     | 
[2025-06-03 21:22:24] 2025-06-04 01:22:03,489 | INFO     | job summary report
[2025-06-03 21:22:24] 2025-06-04 01:22:03,489 | INFO     | --------------------------------------------------
[2025-06-03 21:22:24] 2025-06-04 01:22:03,489 | INFO     | PanDA job id: 6678014521
[2025-06-03 21:22:24] 2025-06-04 01:22:03,489 | INFO     | task id: 45006595
[2025-06-03 21:22:24] 2025-06-04 01:22:03,489 | INFO     | errors: (none)
[2025-06-03 21:22:24] 2025-06-04 01:22:03,489 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:22:24] 2025-06-04 01:22:03,489 | INFO     | pilot state: finished 
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | transexitcode: 0
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | exeerrorcode: 0
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | exeerrordiag: 
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | exitcode: 0
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | exitmsg: OK
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | cpuconsumptiontime: 41072 s
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | nevents: 400
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | neventsw: 0
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | pid: 1771679
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | pgrp: 1771679
[2025-06-03 21:22:24] 2025-06-04 01:22:03,490 | INFO     | corecount: 10
[2025-06-03 21:22:24] 2025-06-04 01:22:03,491 | INFO     | event service: False
[2025-06-03 21:22:24] 2025-06-04 01:22:03,491 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 4987: 2431501, 4989: 2440442, 4991: 2440498, 4996: 2440796}
[2025-06-03 21:22:24] 2025-06-04 01:22:03,491 | INFO     | --------------------------------------------------
[2025-06-03 21:22:24] 2025-06-04 01:22:03,491 | INFO     | 
[2025-06-03 21:22:24] 2025-06-04 01:22:03,491 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 21:22:24] 2025-06-04 01:22:03,511 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,512 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,512 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,512 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:22:24] 2025-06-04 01:22:03,514 | INFO     | job 6678014521 has completed (purged errors)
[2025-06-03 21:22:24] 2025-06-04 01:22:03,514 | INFO     | overall cleanup function is called
[2025-06-03 21:22:24] 2025-06-04 01:22:04,522 | INFO     | --- collectZombieJob: --- 10, [1771679]
[2025-06-03 21:22:24] 2025-06-04 01:22:04,522 | INFO     | zombie collector waiting for pid 1771679
[2025-06-03 21:22:24] 2025-06-04 01:22:04,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:22:24] 2025-06-04 01:22:04,523 | INFO     | collected zombie processes
[2025-06-03 21:22:24] 2025-06-04 01:22:04,523 | INFO     | will attempt to kill all subprocesses of pid=1771679
[2025-06-03 21:22:24] 2025-06-04 01:22:05,086 | INFO     | process IDs to be killed: [1771679] (in reverse order)
[2025-06-03 21:22:24] 2025-06-04 01:22:05,185 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:22:24] 2025-06-04 01:22:05,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:22:24] 2025-06-04 01:22:05,223 | INFO     | did not find any defunct processes belonging to 1771679
[2025-06-03 21:22:24] 2025-06-04 01:22:05,265 | INFO     | did not find any defunct processes belonging to 1771679
[2025-06-03 21:22:24] 2025-06-04 01:22:05,265 | INFO     | ready for new job
[2025-06-03 21:22:24] 2025-06-04 01:22:05,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:22:24] 2025-06-04 01:22:05,267 | INFO     | **************************************
[2025-06-03 21:22:24] 2025-06-04 01:22:05,268 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:22:24] 2025-06-04 01:22:05,268 | INFO     | **************************************
[2025-06-03 21:22:24] 2025-06-04 01:22:05,268 | INFO     | 
[2025-06-03 21:22:24] 2025-06-04 01:22:05,283 | INFO     | architecture information:
[2025-06-03 21:22:24] 2025-06-04 01:22:05,283 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:22:24] 2025-06-04 01:22:05,301 | INFO     | cat /etc/os-release:
[2025-06-03 21:22:24] NAME="CentOS Linux"
[2025-06-03 21:22:24] VERSION="7 (Core)"
[2025-06-03 21:22:24] ID="centos"
[2025-06-03 21:22:24] ID_LIKE="rhel fedora"
[2025-06-03 21:22:24] VERSION_ID="7"
[2025-06-03 21:22:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:22:24] ANSI_COLOR="0;31"
[2025-06-03 21:22:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:22:24] HOME_URL="https://www.centos.org/"
[2025-06-03 21:22:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:22:24] 
[2025-06-03 21:22:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:22:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:22:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:22:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:22:24] 
[2025-06-03 21:22:24] 2025-06-04 01:22:05,301 | INFO     | **************************************
[2025-06-03 21:22:24] 2025-06-04 01:22:05,376 | INFO     | PID=1764275 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 21:22:24] 2025-06-04 01:22:05,376 | INFO     | .. there are 27 such processes running
[2025-06-03 21:22:24] 2025-06-04 01:22:05,804 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 21:22:24] 2025-06-04 01:22:05,822 | INFO     | sufficient remaining disk space (76513542144 B)
[2025-06-03 21:22:24] 2025-06-04 01:22:05,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:22:24] 2025-06-04 01:22:05,823 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:22:24] 2025-06-04 01:22:05,823 | INFO     | update_server=False
[2025-06-03 21:22:24] 2025-06-04 01:22:05,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:22:24] 2025-06-04 01:22:05,824 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:22:24] 2025-06-04 01:22:05,824 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:22:24] 2025-06-04 01:22:05,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:22:24] 2025-06-04 01:22:05,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:22:24] 2025-06-04 01:22:06,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:22:24] 2025-06-04 01:22:06,067 | INFO     | aborting loop
[2025-06-03 21:22:24] 2025-06-04 01:22:06,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:22:24] 2025-06-04 01:22:06,386 | INFO     | all data control threads have been joined
[2025-06-03 21:22:24] 2025-06-04 01:22:06,480 | INFO     | all payload control threads have been joined
[2025-06-03 21:22:24] 2025-06-04 01:22:06,827 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:07,071 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:07,196 | INFO     | all job control threads have been joined
[2025-06-03 21:22:24] 2025-06-04 01:22:07,241 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:07,392 | INFO     | [data] control thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:07,435 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:07,485 | INFO     | [payload] control thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:08,033 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:08,152 | INFO     | [job] validate thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:08,200 | INFO     | [job] control thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:08,270 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:08,332 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:08,346 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:08,372 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:08,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:22:24] 2025-06-04 01:22:08,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:22:24] 2025-06-04 01:22:09,501 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:12,829 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:16,525 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:22:24] 2025-06-04 01:22:17,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:22:24] 2025-06-04 01:22:18,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020044498752)>', '<ExcThread(monitor, started 140019280897792)>']
[2025-06-03 21:22:24] 2025-06-04 01:22:18,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:22:24] 2025-06-04 01:22:18,887 | INFO     | [monitor] control thread has ended
[2025-06-03 21:22:24] 2025-06-04 01:22:23,858 | INFO     | all workflow threads have been joined
[2025-06-03 21:22:24] 2025-06-04 01:22:23,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:22:24] 2025-06-04 01:22:23,859 | INFO     | traces error code: 0
[2025-06-03 21:22:24] 2025-06-04 01:22:23,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:22:24] 2025-06-04 01:22:24,056 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:22:24] 2025-06-04 01:22:24,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:22:24] 2025-06-04 01:22:24,062 [wrapper] pilotpid: 1764275
[2025-06-03 21:22:24] 2025-06-04 01:22:24,065 [wrapper] Pilot exit status: 0
[2025-06-03 21:22:24] 2025-06-04 01:22:24,075 [wrapper] pandaids: 6678014521
[2025-06-03 21:22:24] 2025-06-04 01:22:24,139 [wrapper] cleanup supervisor_pilot 2004278 1764276
[2025-06-03 21:22:24] 2025-06-04 01:22:24,142 [wrapper] Test setup, not cleaning
[2025-06-03 21:22:24] 2025-06-04 01:22:24,145 [wrapper] apfmon messages muted
[2025-06-03 21:22:24] 2025-06-04 01:22:24,148 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:22:24] 2025-06-04 01:22:24,151 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:22:24]  *** Error codes and diagnostics ***
[2025-06-03 21:22:24]     "exeErrorCode": 0,
[2025-06-03 21:22:24]     "exeErrorDiag": "",
[2025-06-03 21:22:24]     "pilotErrorCode": 0,
[2025-06-03 21:22:24]     "pilotErrorDiag": "",
[2025-06-03 21:22:24]  *** Listing of results directory ***
[2025-06-03 21:22:24] total 391028
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 15:41 pilot3.tar.gz
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:57 queuedata.json
[2025-06-03 21:22:24] -rwx------. 1 boincer umatlas     37140 Jun  3 15:58 runpilot2-wrapper.sh
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas       100 Jun  3 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:22:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 19:58 run_atlas
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas       105 Jun  3 19:58 job.xml
[2025-06-03 21:22:24] -rw-r--r--. 2 boincer umatlas 215323605 Jun  3 19:58 EVNT.45006593._001769.pool.root.1
[2025-06-03 21:22:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 19:58 start_atlas.sh
[2025-06-03 21:22:24] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 19:58 shared
[2025-06-03 21:22:24] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 19:58 input.tar.gz
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas         0 Jun  3 19:58 boinc_lockfile
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 19:58 pandaJob.out
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas    986077 Jun  3 19:58 agis_schedconf.cvmfs.json
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas   1603667 Jun  3 19:58 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:22:24] drwx------. 4 boincer umatlas      4096 Jun  3 19:58 pilot3
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas 179610667 Jun  3 21:21 HITS.45006595._044146.pool.root.1
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 21:21 init_data.xml
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas       529 Jun  3 21:21 boinc_task_state.xml
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas        95 Jun  3 21:21 pilot_heartbeat.json
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas      1037 Jun  3 21:21 memory_monitor_summary.json
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas    330772 Jun  3 21:21 log.45006595._044146.job.log.tgz.1
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas      7714 Jun  3 21:22 heartbeat.json
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas        27 Jun  3 21:22 wrapper_checkpoint.txt
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:22 boinc_mmap_file
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas      4944 Jun  3 21:22 pilotlog.txt
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas    488609 Jun  3 21:22 log.45006595._044146.job.log.1
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas       357 Jun  3 21:22 output.list
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:22 runtime_log
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas    839680 Jun  3 21:22 result.tar.gz
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas       651 Jun  3 21:22 VIuNDm5wmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmynZKDmtOIXbn.diag
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas      8651 Jun  3 21:22 runtime_log.err
[2025-06-03 21:22:24] -rw-r--r--. 1 boincer umatlas     21739 Jun  3 21:22 stderr.txt
[2025-06-03 21:22:24] HITS file was successfully produced:
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas 179610667 Jun  3 21:21 shared/HITS.pool.root.1
[2025-06-03 21:22:24]  *** Contents of shared directory: ***
[2025-06-03 21:22:24] total 387028
[2025-06-03 21:22:24] -rw-r--r--. 2 boincer umatlas 215323605 Jun  3 19:58 ATLAS.root_0
[2025-06-03 21:22:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 19:58 start_atlas.sh
[2025-06-03 21:22:24] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 19:58 input.tar.gz
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas 179610667 Jun  3 21:21 HITS.pool.root.1
[2025-06-03 21:22:24] -rw-------. 1 boincer umatlas    839680 Jun  3 21:22 result.tar.gz
21:22:46 (1760268): run_atlas exited; CPU time 41187.150952
21:22:46 (1760268): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN