Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
04:28:14 (108580): wrapper (7.7.26015): starting
04:28:14 (108580): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 04:28:14] Arguments: --nthreads 12
[2025-06-04 04:28:14] Threads: 12
[2025-06-04 04:28:14] Checking for CVMFS
[2025-06-04 04:28:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:28:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:28:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:28:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:28:14] 2.13.0.0 3386825 2302 57072 146775 1 56 3216790 6144000 0 130560 0 920363 99.993 277294 2865 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 04:28:14] CVMFS is ok
[2025-06-04 04:28:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:28:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 04:28:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 04:28:14] Further information can be found at the LHC@home message board.
[2025-06-04 04:28:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:28:14] Checking for apptainer binary...
[2025-06-04 04:28:14] apptainer is not installed, using version from CVMFS
[2025-06-04 04:28:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:28:14] ace
[2025-06-04 04:28:14] apptainer works
[2025-06-04 04:28:15] Set ATHENA_PROC_NUMBER=12
[2025-06-04 04:28:15] Set ATHENA_CORE_NUMBER=12
[2025-06-04 04:28:15] Starting ATLAS job with PandaID=6678015344
[2025-06-04 04:28:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:36:32]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:36:32]  is_tar=False
[2025-06-04 05:36:32]  lfn=log.45006595._044461.job.log.tgz.1
[2025-06-04 05:36:32]  mtime=0
[2025-06-04 05:36:32]  protocol_id=None
[2025-06-04 05:36:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:36:32]  replicas=None
[2025-06-04 05:36:32]  scope=mc23_13p6TeV
[2025-06-04 05:36:32]  status=None
[2025-06-04 05:36:32]  status_code=0
[2025-06-04 05:36:32]  storage_token=
[2025-06-04 05:36:32]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6678015344/log.45006595._044461.job.log.tgz.1
[2025-06-04 05:36:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/56/log.45006595._044461.job.log.tgz.1
[2025-06-04 05:36:32]  workdir=None
[2025-06-04 05:36:32] ]
[2025-06-04 05:36:32] 2025-06-04 10:36:03,663 | INFO     | transferring file log.45006595._044461.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678015344/log.45006595._044461.job.log.tgz.1 to /var/lib/boinc
[2025-06-04 05:36:32] 2025-06-04 10:36:03,663 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678015344/log.45006595._044461.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-04 05:36:32] 2025-06-04 10:36:03,676 | INFO     | adding to output.list: log.45006595._044461.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/56/log.45006595._044461.job.log.tg
[2025-06-04 05:36:32] 2025-06-04 10:36:03,676 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:36:32] 2025-06-04 10:36:03,676 | INFO     | summary of transferred files:
[2025-06-04 05:36:32] 2025-06-04 10:36:03,676 | INFO     |  -- lfn=log.45006595._044461.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:36:32] 2025-06-04 10:36:03,677 | INFO     | stage-out finished correctly
[2025-06-04 05:36:32] 2025-06-04 10:36:05,250 | INFO     | monitor loop #304: job 0:6678015344 is in state 'finished'
[2025-06-04 05:36:32] 2025-06-04 10:36:05,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:36:32] 2025-06-04 10:36:07,108 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:36:32] 2025-06-04 10:36:07,753 | INFO     | monitor loop #305: job 0:6678015344 is in state 'finished'
[2025-06-04 05:36:32] 2025-06-04 10:36:07,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:36:32] 2025-06-04 10:36:09,938 | INFO     | job 6678015344 has state=finished
[2025-06-04 05:36:32] 2025-06-04 10:36:09,938 | INFO     | preparing for final server update for job 6678015344 in state='finished'
[2025-06-04 05:36:32] 2025-06-04 10:36:09,938 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:36:32] 2025-06-04 10:36:09,939 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:36:32] 2025-06-04 10:36:09,939 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:36:32] 2025-06-04 10:36:09,939 | INFO     | job 6678015344 has finished - writing final server update
[2025-06-04 05:36:32] 2025-06-04 10:36:09,939 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:36:32] 2025-06-04 10:36:09,941 | INFO     | executing command: lscpu
[2025-06-04 05:36:32] 2025-06-04 10:36:09,960 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:36:32] 2025-06-04 10:36:10,257 | INFO     | monitor loop #306: job 0:6678015344 is in state 'finished'
[2025-06-04 05:36:32] 2025-06-04 10:36:10,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:36:32] 2025-06-04 10:36:12,760 | INFO     | monitor loop #307: job 0:6678015344 is in state 'finished'
[2025-06-04 05:36:32] 2025-06-04 10:36:12,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:36:32] 2025-06-04 10:36:13,794 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:36:32] 2025-06-04 10:36:13,795 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678015344/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:36:32] 2025-06-04 10:36:13,795 | INFO     | extracted standard info from prmon json
[2025-06-04 05:36:32] 2025-06-04 10:36:13,795 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:36:32] 2025-06-04 10:36:13,795 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:36:32] 2025-06-04 10:36:13,795 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:36:32] 2025-06-04 10:36:13,795 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:36:32] 2025-06-04 10:36:13,796 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:36:32] 2025-06-04 10:36:13,796 | INFO     | sum of square deviations: 66959395.0
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | sum of deviations: -9211265533.0
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | mean x: 1749031429.5
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | mean y: 3000198.066666667
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | -- intersect: 240608413713.03452
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | intersect: 240608413713.03452
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | chi2: 0.11175638931109536
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | -- intersect: 240608413713.03452
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | current memory leak: -137.56 B/s (using 60 data points, chi2=0.11)
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | ..............................
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | . Timing measurements:
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | . get job = 0 s
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | . initial setup = 3 s
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | . payload setup = 4 s
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | . stage-in = 0 s
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | . payload execution = 4037 s
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | . stage-out = 0 s
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | . log creation = 0 s
[2025-06-04 05:36:32] 2025-06-04 10:36:13,797 | INFO     | ..............................
[2025-06-04 05:36:32] 2025-06-04 10:36:13,840 | INFO     | 
[2025-06-04 05:36:32] 2025-06-04 10:36:13,840 | INFO     | job summary report
[2025-06-04 05:36:32] 2025-06-04 10:36:13,840 | INFO     | --------------------------------------------------
[2025-06-04 05:36:32] 2025-06-04 10:36:13,840 | INFO     | PanDA job id: 6678015344
[2025-06-04 05:36:32] 2025-06-04 10:36:13,840 | INFO     | task id: 45006595
[2025-06-04 05:36:32] 2025-06-04 10:36:13,840 | INFO     | errors: (none)
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | pilot state: finished 
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | transexitcode: 0
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | exeerrorcode: 0
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | exeerrordiag: 
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | exitcode: 0
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | exitmsg: OK
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | cpuconsumptiontime: 44100 s
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | nevents: 400
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | neventsw: 0
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | pid: 118781
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | pgrp: 118781
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | corecount: 12
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | event service: False
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | sizes: {0: 2405191, 3: 2405397, 11: 2405425, 4045: 2431293, 4046: 2440248, 4049: 2440304, 4056: 2440602}
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | --------------------------------------------------
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | 
[2025-06-04 05:36:32] 2025-06-04 10:36:13,841 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-04 05:36:32] 2025-06-04 10:36:13,855 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:36:32] 2025-06-04 10:36:13,856 | INFO     | job 6678015344 has completed (purged errors)
[2025-06-04 05:36:32] 2025-06-04 10:36:13,857 | INFO     | overall cleanup function is called
[2025-06-04 05:36:32] 2025-06-04 10:36:14,861 | INFO     | --- collectZombieJob: --- 10, [118781]
[2025-06-04 05:36:32] 2025-06-04 10:36:14,861 | INFO     | zombie collector waiting for pid 118781
[2025-06-04 05:36:32] 2025-06-04 10:36:14,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:36:32] 2025-06-04 10:36:14,861 | INFO     | collected zombie processes
[2025-06-04 05:36:32] 2025-06-04 10:36:14,861 | INFO     | will attempt to kill all subprocesses of pid=118781
[2025-06-04 05:36:32] 2025-06-04 10:36:14,926 | INFO     | process IDs to be killed: [118781] (in reverse order)
[2025-06-04 05:36:32] 2025-06-04 10:36:14,961 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:36:32] 2025-06-04 10:36:14,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:36:32] 2025-06-04 10:36:14,964 | INFO     | did not find any defunct processes belonging to 118781
[2025-06-04 05:36:32] 2025-06-04 10:36:14,966 | INFO     | did not find any defunct processes belonging to 118781
[2025-06-04 05:36:32] 2025-06-04 10:36:14,966 | INFO     | ready for new job
[2025-06-04 05:36:32] 2025-06-04 10:36:14,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:36:32] 2025-06-04 10:36:14,967 | INFO     | **************************************
[2025-06-04 05:36:32] 2025-06-04 10:36:14,967 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:36:32] 2025-06-04 10:36:14,967 | INFO     | **************************************
[2025-06-04 05:36:32] 2025-06-04 10:36:14,967 | INFO     | 
[2025-06-04 05:36:32] 2025-06-04 10:36:14,968 | INFO     | architecture information:
[2025-06-04 05:36:32] 2025-06-04 10:36:14,968 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:36:32] 2025-06-04 10:36:14,982 | INFO     | cat /etc/os-release:
[2025-06-04 05:36:32] NAME="CentOS Linux"
[2025-06-04 05:36:32] VERSION="7 (Core)"
[2025-06-04 05:36:32] ID="centos"
[2025-06-04 05:36:32] ID_LIKE="rhel fedora"
[2025-06-04 05:36:32] VERSION_ID="7"
[2025-06-04 05:36:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:36:32] ANSI_COLOR="0;31"
[2025-06-04 05:36:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:36:32] HOME_URL="https://www.centos.org/"
[2025-06-04 05:36:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:36:32] 
[2025-06-04 05:36:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:36:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:36:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:36:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:36:32] 
[2025-06-04 05:36:32] 2025-06-04 10:36:14,982 | INFO     | **************************************
[2025-06-04 05:36:32] 2025-06-04 10:36:15,485 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-04 05:36:32] 2025-06-04 10:36:15,498 | INFO     | sufficient remaining disk space (24292360192 B)
[2025-06-04 05:36:32] 2025-06-04 10:36:15,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:36:32] 2025-06-04 10:36:15,499 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:36:32] 2025-06-04 10:36:15,499 | INFO     | update_server=False
[2025-06-04 05:36:32] 2025-06-04 10:36:15,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:36:32] 2025-06-04 10:36:15,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:36:32] 2025-06-04 10:36:15,499 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:36:32] 2025-06-04 10:36:15,499 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:36:32] 2025-06-04 10:36:15,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:36:32] 2025-06-04 10:36:15,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:36:32] 2025-06-04 10:36:15,841 | INFO     | all data control threads have been joined
[2025-06-04 05:36:32] 2025-06-04 10:36:16,143 | INFO     | all job control threads have been joined
[2025-06-04 05:36:32] 2025-06-04 10:36:16,263 | INFO     | all payload control threads have been joined
[2025-06-04 05:36:32] 2025-06-04 10:36:16,269 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:36:32] 2025-06-04 10:36:16,269 | INFO     | aborting loop
[2025-06-04 05:36:32] 2025-06-04 10:36:16,504 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:16,504 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:16,513 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:16,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:36:32] 2025-06-04 10:36:16,766 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:16,846 | INFO     | [data] control thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:16,886 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:16,901 | INFO     | [job] validate thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:17,097 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:17,145 | INFO     | [job] control thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:17,268 | INFO     | [payload] control thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:17,274 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:17,605 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:17,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:36:32] 2025-06-04 10:36:17,753 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:18,738 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:21,681 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:25,833 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:36:32] 2025-06-04 10:36:26,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:36:32] 2025-06-04 10:36:27,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293371795264)>', '<ExcThread(monitor, started 140293043095296)>']
[2025-06-04 05:36:32] 2025-06-04 10:36:28,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:36:32] 2025-06-04 10:36:28,566 | INFO     | [monitor] control thread has ended
[2025-06-04 05:36:32] 2025-06-04 10:36:32,619 | INFO     | all workflow threads have been joined
[2025-06-04 05:36:32] 2025-06-04 10:36:32,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:36:32] 2025-06-04 10:36:32,620 | INFO     | traces error code: 0
[2025-06-04 05:36:32] 2025-06-04 10:36:32,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:36:32] 2025-06-04 10:36:32,687 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:36:32] 2025-06-04 10:36:32,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:36:32] 2025-06-04 10:36:32,692 [wrapper] pilotpid: 112270
[2025-06-04 05:36:32] 2025-06-04 10:36:32,697 [wrapper] Pilot exit status: 0
[2025-06-04 05:36:32] 2025-06-04 10:36:32,705 [wrapper] pandaids: 6678015344
[2025-06-04 05:36:32] 2025-06-04 10:36:32,729 [wrapper] cleanup supervisor_pilot  129611 112271
[2025-06-04 05:36:32] 2025-06-04 10:36:32,731 [wrapper] Test setup, not cleaning
[2025-06-04 05:36:32] 2025-06-04 10:36:32,733 [wrapper] apfmon messages muted
[2025-06-04 05:36:32] 2025-06-04 10:36:32,734 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:36:32] 2025-06-04 10:36:32,737 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:36:32]  *** Error codes and diagnostics ***
[2025-06-04 05:36:32]     "exeErrorCode": 0,
[2025-06-04 05:36:32]     "exeErrorDiag": "",
[2025-06-04 05:36:32]     "pilotErrorCode": 0,
[2025-06-04 05:36:32]     "pilotErrorDiag": "",
[2025-06-04 05:36:32]  *** Listing of results directory ***
[2025-06-04 05:36:32] total 396824
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:41 pilot3.tar.gz
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc      5111 Jun  3 15:06 queuedata.json
[2025-06-04 05:36:32] -rwx------ 1 boinc boinc     37140 Jun  3 15:06 runpilot2-wrapper.sh
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc       100 Jun  4 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:36:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 04:28 run_atlas
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc       105 Jun  4 04:28 job.xml
[2025-06-04 05:36:32] drwxrwx--x 2 boinc boinc      4096 Jun  4 04:28 shared
[2025-06-04 05:36:32] -rw-r--r-- 2 boinc boinc    508878 Jun  4 04:28 input.tar.gz
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc      6748 Jun  4 04:28 init_data.xml
[2025-06-04 05:36:32] -rw-r--r-- 2 boinc boinc 215711009 Jun  4 04:28 EVNT.45006593._001781.pool.root.1
[2025-06-04 05:36:32] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:28 start_atlas.sh
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc         0 Jun  4 04:28 boinc_lockfile
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc      2525 Jun  4 04:28 pandaJob.out
[2025-06-04 05:36:32] -rw------- 1 boinc boinc    986766 Jun  4 04:28 agis_schedconf.cvmfs.json
[2025-06-04 05:36:32] -rw------- 1 boinc boinc   1603667 Jun  4 04:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:36:32] drwx------ 4 boinc boinc      4096 Jun  4 04:28 pilot3
[2025-06-04 05:36:32] -rw------- 1 boinc boinc 185260524 Jun  4 05:35 HITS.45006595._044461.pool.root.1
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc       529 Jun  4 05:36 boinc_task_state.xml
[2025-06-04 05:36:32] -rw------- 1 boinc boinc      1029 Jun  4 05:36 memory_monitor_summary.json
[2025-06-04 05:36:32] -rw------- 1 boinc boinc    370324 Jun  4 05:36 log.45006595._044461.job.log.tgz.1
[2025-06-04 05:36:32] -rw------- 1 boinc boinc        95 Jun  4 05:36 pilot_heartbeat.json
[2025-06-04 05:36:32] -rw------- 1 boinc boinc      7678 Jun  4 05:36 heartbeat.json
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc      8192 Jun  4 05:36 boinc_mmap_file
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc        27 Jun  4 05:36 wrapper_checkpoint.txt
[2025-06-04 05:36:32] -rw------- 1 boinc boinc      4555 Jun  4 05:36 pilotlog.txt
[2025-06-04 05:36:32] -rw------- 1 boinc boinc    400889 Jun  4 05:36 log.45006595._044461.job.log.1
[2025-06-04 05:36:32] -rw------- 1 boinc boinc       357 Jun  4 05:36 output.list
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc       620 Jun  4 05:36 runtime_log
[2025-06-04 05:36:32] -rw------- 1 boinc boinc    788480 Jun  4 05:36 result.tar.gz
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc      8696 Jun  4 05:36 runtime_log.err
[2025-06-04 05:36:32] -rw------- 1 boinc boinc       641 Jun  4 05:36 6Y8KDmQ5mg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmszlKDm3W6cvm.diag
[2025-06-04 05:36:32] -rw-r--r-- 1 boinc boinc     21587 Jun  4 05:36 stderr.txt
[2025-06-04 05:36:32] HITS file was successfully produced:
[2025-06-04 05:36:32] -rw------- 1 boinc boinc 185260524 Jun  4 05:35 shared/HITS.pool.root.1
[2025-06-04 05:36:32]  *** Contents of shared directory: ***
[2025-06-04 05:36:32] total 392872
[2025-06-04 05:36:32] -rw-r--r-- 2 boinc boinc    508878 Jun  4 04:28 input.tar.gz
[2025-06-04 05:36:32] -rw-r--r-- 2 boinc boinc 215711009 Jun  4 04:28 ATLAS.root_0
[2025-06-04 05:36:32] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:28 start_atlas.sh
[2025-06-04 05:36:32] -rw------- 1 boinc boinc 185260524 Jun  4 05:35 HITS.pool.root.1
[2025-06-04 05:36:32] -rw------- 1 boinc boinc    788480 Jun  4 05:36 result.tar.gz
05:36:33 (108580): run_atlas exited; CPU time 44145.533782
05:36:33 (108580): called boinc_finish(0)

</stderr_txt>
]]>

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