Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:48:20 (12360): wrapper (7.7.26015): starting
19:48:20 (12360): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 19:48:20] Arguments: --nthreads 8
[2025-06-03 19:48:20] Threads: 8
[2025-06-03 19:48:20] Checking for CVMFS
[2025-06-03 19:48:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 19:48:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 19:48:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 19:48:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 19:48:21] 2.11.2.0 3101 15673 73076 146761 2 56 14854349 20275200 1 130560 0 7145474 99.982 3009137 4304 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 19:48:21] CVMFS is ok
[2025-06-03 19:48:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:48:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:48:21] Further information can be found at the LHC@home message board.
[2025-06-03 19:48:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:48:21] Checking for apptainer binary...
[2025-06-03 19:48:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 19:48:21] Running /usr/bin/apptainer --version
[2025-06-03 19:48:21] apptainer version 1.3.2-1.el7
[2025-06-03 19:48:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:48:22] c-204-15.aglt2.org
[2025-06-03 19:48:22] apptainer works
[2025-06-03 19:48:22] Set ATHENA_PROC_NUMBER=8
[2025-06-03 19:48:22] Set ATHENA_CORE_NUMBER=8
[2025-06-03 19:48:22] Starting ATLAS job with PandaID=6678015336
[2025-06-03 19:48:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:45:37]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:45:37] 2025-06-04 01:45:12,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:45:37] 2025-06-04 01:45:14,985 | INFO     | monitor loop #518: job 0:6678015336 is in state 'finished'
[2025-06-03 21:45:37] 2025-06-04 01:45:14,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,489 | INFO     | monitor loop #519: job 0:6678015336 is in state 'finished'
[2025-06-03 21:45:37] 2025-06-04 01:45:17,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,817 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 21:45:37] 2025-06-04 01:45:17,818 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678015336/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,819 | INFO     | extracted standard info from prmon json
[2025-06-03 21:45:37] 2025-06-04 01:45:17,819 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:45:37] 2025-06-04 01:45:17,819 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:45:37] 2025-06-04 01:45:17,820 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:45:37] 2025-06-04 01:45:17,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:45:37] 2025-06-04 01:45:17,824 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:45:37] 2025-06-04 01:45:17,824 | INFO     | sum of square deviations: 459366752.5
[2025-06-03 21:45:37] 2025-06-04 01:45:17,825 | INFO     | sum of deviations: 3328140205.5
[2025-06-03 21:45:37] 2025-06-04 01:45:17,825 | INFO     | mean x: 1748997997.5
[2025-06-03 21:45:37] 2025-06-04 01:45:17,825 | INFO     | mean y: 2504573.7280701753
[2025-06-03 21:45:37] 2025-06-04 01:45:17,825 | INFO     | -- intersect: -12669092844.107996
[2025-06-03 21:45:37] 2025-06-04 01:45:17,825 | INFO     | intersect: -12669092844.107996
[2025-06-03 21:45:37] 2025-06-04 01:45:17,826 | INFO     | chi2: 1.6166658316265825
[2025-06-03 21:45:37] 2025-06-04 01:45:17,826 | INFO     | sum of square deviations: 401533110.0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,827 | INFO     | sum of deviations: 3429373700.999999
[2025-06-03 21:45:37] 2025-06-04 01:45:17,827 | INFO     | mean x: 1748997845.0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,827 | INFO     | mean y: 2504840.862385321
[2025-06-03 21:45:37] 2025-06-04 01:45:17,827 | INFO     | -- intersect: -14935160480.806038
[2025-06-03 21:45:37] 2025-06-04 01:45:17,827 | INFO     | intersect: -14935160480.806038
[2025-06-03 21:45:37] 2025-06-04 01:45:17,828 | INFO     | chi2: 1.6191826350649159
[2025-06-03 21:45:37] 2025-06-04 01:45:17,828 | INFO     | current chi2=1.6191826350649159 (change=-0.15567864360695616 %)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,828 | INFO     | right removable region: 108
[2025-06-03 21:45:37] 2025-06-04 01:45:17,828 | INFO     | sum of square deviations: 401533110.0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,829 | INFO     | sum of deviations: -13618988344.000002
[2025-06-03 21:45:37] 2025-06-04 01:45:17,829 | INFO     | mean x: 1748998150.0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,829 | INFO     | mean y: 2548338.4220183487
[2025-06-03 21:45:37] 2025-06-04 01:45:17,829 | INFO     | -- intersect: 59324145549.98837
[2025-06-03 21:45:37] 2025-06-04 01:45:17,829 | INFO     | intersect: 59324145549.98837
[2025-06-03 21:45:37] 2025-06-04 01:45:17,830 | INFO     | chi2: 0.1186294302095066
[2025-06-03 21:45:37] 2025-06-04 01:45:17,830 | INFO     | current chi2=0.1186294302095066 (change=92.66209331026998 %)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,830 | INFO     | sum of square deviations: 348769330.0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,831 | INFO     | sum of deviations: -12869090638.999998
[2025-06-03 21:45:37] 2025-06-04 01:45:17,831 | INFO     | mean x: 1748998302.5
[2025-06-03 21:45:37] 2025-06-04 01:45:17,831 | INFO     | mean y: 2546010.0576923075
[2025-06-03 21:45:37] 2025-06-04 01:45:17,831 | INFO     | -- intersect: 64538087831.72429
[2025-06-03 21:45:37] 2025-06-04 01:45:17,831 | INFO     | intersect: 64538087831.72429
[2025-06-03 21:45:37] 2025-06-04 01:45:17,832 | INFO     | chi2: 0.10039855130111307
[2025-06-03 21:45:37] 2025-06-04 01:45:17,832 | INFO     | current chi2=0.10039855130111307 (change=15.367922509782538 %)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,832 | INFO     | left removable region: 20
[2025-06-03 21:45:37] 2025-06-04 01:45:17,832 | INFO     | sum of square deviations: 211285822.0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,832 | INFO     | sum of deviations: -5569106080.999999
[2025-06-03 21:45:37] 2025-06-04 01:45:17,833 | INFO     | mean x: 1748998424.5
[2025-06-03 21:45:37] 2025-06-04 01:45:17,833 | INFO     | mean y: 2524507.090909091
[2025-06-03 21:45:37] 2025-06-04 01:45:17,833 | INFO     | -- intersect: 46102909612.6394
[2025-06-03 21:45:37] 2025-06-04 01:45:17,833 | INFO     | intersect: 46102909612.6394
[2025-06-03 21:45:37] 2025-06-04 01:45:17,833 | INFO     | chi2: 0.07229941011661233
[2025-06-03 21:45:37] 2025-06-04 01:45:17,833 | INFO     | -- intersect: 46102909612.6394
[2025-06-03 21:45:37] 2025-06-04 01:45:17,833 | INFO     | current memory leak: -26.36 B/s (using 88 data points, chi2=0.07)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,834 | INFO     | ..............................
[2025-06-03 21:45:37] 2025-06-04 01:45:17,834 | INFO     | . Timing measurements:
[2025-06-03 21:45:37] 2025-06-04 01:45:17,834 | INFO     | . get job = 0 s
[2025-06-03 21:45:37] 2025-06-04 01:45:17,834 | INFO     | . initial setup = 2 s
[2025-06-03 21:45:37] 2025-06-04 01:45:17,834 | INFO     | . payload setup = 11 s
[2025-06-03 21:45:37] 2025-06-04 01:45:17,835 | INFO     | . stage-in = 0 s
[2025-06-03 21:45:37] 2025-06-04 01:45:17,835 | INFO     | . payload execution = 6957 s
[2025-06-03 21:45:37] 2025-06-04 01:45:17,835 | INFO     | . stage-out = 0 s
[2025-06-03 21:45:37] 2025-06-04 01:45:17,835 | INFO     | . log creation = 0 s
[2025-06-03 21:45:37] 2025-06-04 01:45:17,835 | INFO     | ..............................
[2025-06-03 21:45:37] 2025-06-04 01:45:17,932 | INFO     | 
[2025-06-03 21:45:37] 2025-06-04 01:45:17,932 | INFO     | job summary report
[2025-06-03 21:45:37] 2025-06-04 01:45:17,932 | INFO     | --------------------------------------------------
[2025-06-03 21:45:37] 2025-06-04 01:45:17,933 | INFO     | PanDA job id: 6678015336
[2025-06-03 21:45:37] 2025-06-04 01:45:17,933 | INFO     | task id: 45006595
[2025-06-03 21:45:37] 2025-06-04 01:45:17,933 | INFO     | errors: (none)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,933 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:45:37] 2025-06-04 01:45:17,933 | INFO     | pilot state: finished 
[2025-06-03 21:45:37] 2025-06-04 01:45:17,933 | INFO     | transexitcode: 0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,934 | INFO     | exeerrorcode: 0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,934 | INFO     | exeerrordiag: 
[2025-06-03 21:45:37] 2025-06-04 01:45:17,934 | INFO     | exitcode: 0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,934 | INFO     | exitmsg: OK
[2025-06-03 21:45:37] 2025-06-04 01:45:17,934 | INFO     | cpuconsumptiontime: 51579 s
[2025-06-03 21:45:37] 2025-06-04 01:45:17,934 | INFO     | nevents: 400
[2025-06-03 21:45:37] 2025-06-04 01:45:17,935 | INFO     | neventsw: 0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,935 | INFO     | pid: 22496
[2025-06-03 21:45:37] 2025-06-04 01:45:17,935 | INFO     | pgrp: 22496
[2025-06-03 21:45:37] 2025-06-04 01:45:17,935 | INFO     | corecount: 8
[2025-06-03 21:45:37] 2025-06-04 01:45:17,935 | INFO     | event service: False
[2025-06-03 21:45:37] 2025-06-04 01:45:17,936 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 11: 2405446, 6972: 2432483, 6973: 2441424, 6976: 2441608, 6983: 2441778}
[2025-06-03 21:45:37] 2025-06-04 01:45:17,936 | INFO     | --------------------------------------------------
[2025-06-03 21:45:37] 2025-06-04 01:45:17,936 | INFO     | 
[2025-06-03 21:45:37] 2025-06-04 01:45:17,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 21:45:37] 2025-06-04 01:45:17,965 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,966 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,966 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,966 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:45:37] 2025-06-04 01:45:17,970 | INFO     | job 6678015336 has completed (purged errors)
[2025-06-03 21:45:37] 2025-06-04 01:45:17,970 | INFO     | overall cleanup function is called
[2025-06-03 21:45:37] 2025-06-04 01:45:18,978 | INFO     | --- collectZombieJob: --- 10, [22496]
[2025-06-03 21:45:37] 2025-06-04 01:45:18,978 | INFO     | zombie collector waiting for pid 22496
[2025-06-03 21:45:37] 2025-06-04 01:45:18,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:45:37] 2025-06-04 01:45:18,979 | INFO     | collected zombie processes
[2025-06-03 21:45:37] 2025-06-04 01:45:18,979 | INFO     | will attempt to kill all subprocesses of pid=22496
[2025-06-03 21:45:37] 2025-06-04 01:45:19,069 | INFO     | process IDs to be killed: [22496] (in reverse order)
[2025-06-03 21:45:37] 2025-06-04 01:45:19,127 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:45:37] 2025-06-04 01:45:19,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:45:37] 2025-06-04 01:45:19,132 | INFO     | did not find any defunct processes belonging to 22496
[2025-06-03 21:45:37] 2025-06-04 01:45:19,135 | INFO     | did not find any defunct processes belonging to 22496
[2025-06-03 21:45:37] 2025-06-04 01:45:19,135 | INFO     | ready for new job
[2025-06-03 21:45:37] 2025-06-04 01:45:19,135 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:45:37] 2025-06-04 01:45:19,137 | INFO     | **************************************
[2025-06-03 21:45:37] 2025-06-04 01:45:19,137 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:45:37] 2025-06-04 01:45:19,137 | INFO     | **************************************
[2025-06-03 21:45:37] 2025-06-04 01:45:19,137 | INFO     | 
[2025-06-03 21:45:37] 2025-06-04 01:45:19,137 | INFO     | architecture information:
[2025-06-03 21:45:37] 2025-06-04 01:45:19,138 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:45:37] 2025-06-04 01:45:19,158 | INFO     | cat /etc/os-release:
[2025-06-03 21:45:37] NAME="CentOS Linux"
[2025-06-03 21:45:37] VERSION="7 (Core)"
[2025-06-03 21:45:37] ID="centos"
[2025-06-03 21:45:37] ID_LIKE="rhel fedora"
[2025-06-03 21:45:37] VERSION_ID="7"
[2025-06-03 21:45:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:45:37] ANSI_COLOR="0;31"
[2025-06-03 21:45:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:45:37] HOME_URL="https://www.centos.org/"
[2025-06-03 21:45:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:45:37] 
[2025-06-03 21:45:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:45:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:45:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:45:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:45:37] 
[2025-06-03 21:45:37] 2025-06-04 01:45:19,158 | INFO     | **************************************
[2025-06-03 21:45:37] 2025-06-04 01:45:19,659 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 21:45:37] 2025-06-04 01:45:19,678 | INFO     | sufficient remaining disk space (18637389824 B)
[2025-06-03 21:45:37] 2025-06-04 01:45:19,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:45:37] 2025-06-04 01:45:19,679 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:45:37] 2025-06-04 01:45:19,679 | INFO     | update_server=False
[2025-06-03 21:45:37] 2025-06-04 01:45:19,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:45:37] 2025-06-04 01:45:19,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:45:37] 2025-06-04 01:45:19,987 | INFO     | all payload control threads have been joined
[2025-06-03 21:45:37] 2025-06-04 01:45:19,992 | INFO     | all job control threads have been joined
[2025-06-03 21:45:37] 2025-06-04 01:45:19,998 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 21:45:37] 2025-06-04 01:45:19,998 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 21:45:37] 2025-06-04 01:45:19,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:45:37] 2025-06-04 01:45:19,998 | INFO     | will abort loop
[2025-06-03 21:45:37] 2025-06-04 01:45:20,214 | INFO     | all data control threads have been joined
[2025-06-03 21:45:37] 2025-06-04 01:45:20,314 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:45:37] 2025-06-04 01:45:20,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:45:37] 2025-06-04 01:45:20,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:45:37] 2025-06-04 01:45:20,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:45:37] 2025-06-04 01:45:20,685 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:20,686 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:20,769 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:20,801 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:20,992 | INFO     | [payload] control thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:20,993 | INFO     | [job] control thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:21,004 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:21,046 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:21,218 | INFO     | [data] control thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:21,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:45:37] 2025-06-04 01:45:21,792 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:21,804 | INFO     | [job] validate thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:21,976 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:21,976 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:22,596 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:25,680 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:30,442 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:45:37] 2025-06-04 01:45:31,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:45:37] 2025-06-04 01:45:31,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941871245120)>', '<ExcThread(monitor, started 139940763526912)>']
[2025-06-03 21:45:37] 2025-06-04 01:45:32,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:45:37] 2025-06-04 01:45:32,376 | INFO     | [monitor] control thread has ended
[2025-06-03 21:45:37] 2025-06-04 01:45:36,710 | INFO     | all workflow threads have been joined
[2025-06-03 21:45:37] 2025-06-04 01:45:36,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:45:37] 2025-06-04 01:45:36,711 | INFO     | traces error code: 0
[2025-06-03 21:45:37] 2025-06-04 01:45:36,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:45:37] 2025-06-04 01:45:36,830 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:45:37] 2025-06-04 01:45:36,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:45:37] 2025-06-04 01:45:36,839 [wrapper] pilotpid: 15947
[2025-06-03 21:45:37] 2025-06-04 01:45:36,843 [wrapper] Pilot exit status: 0
[2025-06-03 21:45:37] 2025-06-04 01:45:36,862 [wrapper] pandaids: 6678015336
[2025-06-03 21:45:37] 2025-06-04 01:45:36,907 [wrapper] cleanup supervisor_pilot  9161 15948
[2025-06-03 21:45:37] 2025-06-04 01:45:36,911 [wrapper] Test setup, not cleaning
[2025-06-03 21:45:37] 2025-06-04 01:45:36,916 [wrapper] apfmon messages muted
[2025-06-03 21:45:37] 2025-06-04 01:45:36,920 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:45:37] 2025-06-04 01:45:36,924 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:45:37]  *** Error codes and diagnostics ***
[2025-06-03 21:45:37]     "exeErrorCode": 0,
[2025-06-03 21:45:37]     "exeErrorDiag": "",
[2025-06-03 21:45:37]     "pilotErrorCode": 0,
[2025-06-03 21:45:37]     "pilotErrorDiag": "",
[2025-06-03 21:45:37]  *** Listing of results directory ***
[2025-06-03 21:45:37] total 397528
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 15:41 pilot3.tar.gz
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 16:06 queuedata.json
[2025-06-03 21:45:37] -rwx------ 1 boincer umatlas     37140 Jun  3 16:06 runpilot2-wrapper.sh
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas       100 Jun  3 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:45:37] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 19:48 run_atlas
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas       105 Jun  3 19:48 job.xml
[2025-06-03 21:45:37] -rw-r--r-- 2 boincer umatlas 215711009 Jun  3 19:48 EVNT.45006593._001781.pool.root.1
[2025-06-03 21:45:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 19:48 start_atlas.sh
[2025-06-03 21:45:37] drwxrwx--x 2 boincer umatlas      4096 Jun  3 19:48 shared
[2025-06-03 21:45:37] -rw-r--r-- 2 boincer umatlas    508876 Jun  3 19:48 input.tar.gz
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas         0 Jun  3 19:48 boinc_lockfile
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 19:48 pandaJob.out
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas    986077 Jun  3 19:48 agis_schedconf.cvmfs.json
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas   1603667 Jun  3 19:48 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:45:37] drwx------ 4 boincer umatlas      4096 Jun  3 19:48 pilot3
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas      5824 Jun  3 21:40 init_data.xml
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas 185579512 Jun  3 21:44 HITS.45006595._044453.pool.root.1
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas       529 Jun  3 21:44 boinc_task_state.xml
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas      1049 Jun  3 21:45 memory_monitor_summary.json
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas    328286 Jun  3 21:45 log.45006595._044453.job.log.tgz.1
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas        95 Jun  3 21:45 pilot_heartbeat.json
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas        27 Jun  3 21:45 wrapper_checkpoint.txt
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 21:45 boinc_mmap_file
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas      7752 Jun  3 21:45 heartbeat.json
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas      4611 Jun  3 21:45 pilotlog.txt
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas    641805 Jun  3 21:45 log.45006595._044453.job.log.1
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas       357 Jun  3 21:45 output.list
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas       620 Jun  3 21:45 runtime_log
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas    993280 Jun  3 21:45 result.tar.gz
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 21:45 runtime_log.err
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas       659 Jun  3 21:45 DHzKDmQ5mg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlzlKDmcyhP7n.diag
[2025-06-03 21:45:37] -rw-r--r-- 1 boincer umatlas     21015 Jun  3 21:45 stderr.txt
[2025-06-03 21:45:37] HITS file was successfully produced:
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas 185579512 Jun  3 21:44 shared/HITS.pool.root.1
[2025-06-03 21:45:37]  *** Contents of shared directory: ***
[2025-06-03 21:45:37] total 393380
[2025-06-03 21:45:37] -rw-r--r-- 2 boincer umatlas 215711009 Jun  3 19:48 ATLAS.root_0
[2025-06-03 21:45:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 19:48 start_atlas.sh
[2025-06-03 21:45:37] -rw-r--r-- 2 boincer umatlas    508876 Jun  3 19:48 input.tar.gz
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas 185579512 Jun  3 21:44 HITS.pool.root.1
[2025-06-03 21:45:37] -rw------- 1 boincer umatlas    993280 Jun  3 21:45 result.tar.gz
21:45:38 (12360): run_atlas exited; CPU time 51531.493740
21:45:38 (12360): called boinc_finish(0)

</stderr_txt>
]]>

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