Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:26:05 (31734): wrapper (7.7.26015): starting
13:26:05 (31734): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 13:26:05] Arguments: --nthreads 8
[2025-06-04 13:26:05] Threads: 8
[2025-06-04 13:26:05] Checking for CVMFS
[2025-06-04 13:26:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:26:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:26:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:26:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:26:06] 2.11.2.0 8420 33161 93340 146778 2 207 18511807 25165825 3802 130560 0 17160053 99.808 19695130 2150 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 13:26:06] CVMFS is ok
[2025-06-04 13:26:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:26:06] Checking for apptainer binary...
[2025-06-04 13:26:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:26:06] Running /usr/bin/apptainer --version
[2025-06-04 13:26:06] apptainer version 1.3.2-1.el7
[2025-06-04 13:26:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:26:08] cg-vwn396.simple-grid.lan
[2025-06-04 13:26:08] apptainer works
[2025-06-04 13:26:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:26:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:26:08] Starting ATLAS job with PandaID=6678014749
[2025-06-04 13:26:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:35:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:35:33] 2025-06-04 15:15:53,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:35:33] 2025-06-04 15:15:53,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:35:33] 2025-06-04 15:15:53,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:35:33] 2025-06-04 15:15:53,305 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:35:33] 2025-06-04 15:15:53,306 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,309 | INFO     | sum of deviations: 17254108274.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,309 | INFO     | mean x: 1749043276.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,309 | INFO     | mean y: 2466773.2376681613
[2025-06-04 17:35:33] 2025-06-04 15:15:53,309 | INFO     | -- intersect: -8773779354.65043
[2025-06-04 17:35:33] 2025-06-04 15:15:53,309 | INFO     | intersect: -8773779354.65043
[2025-06-04 17:35:33] 2025-06-04 15:15:53,310 | INFO     | chi2: 2.3874258158194546
[2025-06-04 17:35:33] 2025-06-04 15:15:53,310 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 17:35:33] 2025-06-04 15:15:53,312 | INFO     | sum of deviations: 31214566901.500008
[2025-06-04 17:35:33] 2025-06-04 15:15:53,312 | INFO     | mean x: 1749043123.5
[2025-06-04 17:35:33] 2025-06-04 15:15:53,312 | INFO     | mean y: 2476007.5733944955
[2025-06-04 17:35:33] 2025-06-04 15:15:53,312 | INFO     | -- intersect: -16992441645.75264
[2025-06-04 17:35:33] 2025-06-04 15:15:53,313 | INFO     | intersect: -16992441645.75264
[2025-06-04 17:35:33] 2025-06-04 15:15:53,313 | INFO     | chi2: 1.6176426786208131
[2025-06-04 17:35:33] 2025-06-04 15:15:53,313 | INFO     | current chi2=1.6176426786208131 (change=32.243227500429064 %)
[2025-06-04 17:35:33] 2025-06-04 15:15:53,314 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,315 | INFO     | sum of deviations: 30347254536.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,316 | INFO     | mean x: 1749042971.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,316 | INFO     | mean y: 2475395.1737089204
[2025-06-04 17:35:33] 2025-06-04 15:15:53,316 | INFO     | -- intersect: -17711344517.12551
[2025-06-04 17:35:33] 2025-06-04 15:15:53,316 | INFO     | intersect: -17711344517.12551
[2025-06-04 17:35:33] 2025-06-04 15:15:53,316 | INFO     | chi2: 1.6186606381224318
[2025-06-04 17:35:33] 2025-06-04 15:15:53,316 | INFO     | current chi2=1.6186606381224318 (change=-0.06292857595019383 %)
[2025-06-04 17:35:33] 2025-06-04 15:15:53,317 | INFO     | right removable region: 212
[2025-06-04 17:35:33] 2025-06-04 15:15:53,317 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 17:35:33] 2025-06-04 15:15:53,324 | INFO     | sum of deviations: -19066247138.5
[2025-06-04 17:35:33] 2025-06-04 15:15:53,324 | INFO     | mean x: 1749043428.5
[2025-06-04 17:35:33] 2025-06-04 15:15:53,325 | INFO     | mean y: 2491042.756880734
[2025-06-04 17:35:33] 2025-06-04 15:15:53,325 | INFO     | -- intersect: 10383200716.027199
[2025-06-04 17:35:33] 2025-06-04 15:15:53,325 | INFO     | intersect: 10383200716.027199
[2025-06-04 17:35:33] 2025-06-04 15:15:53,325 | INFO     | chi2: 0.875394459473307
[2025-06-04 17:35:33] 2025-06-04 15:15:53,325 | INFO     | current chi2=0.875394459473307 (change=63.333124167762314 %)
[2025-06-04 17:35:33] 2025-06-04 15:15:53,326 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,328 | INFO     | sum of deviations: -15783720232.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,328 | INFO     | mean x: 1749043581.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,328 | INFO     | mean y: 2488686.2253521127
[2025-06-04 17:35:33] 2025-06-04 15:15:53,328 | INFO     | -- intersect: 9215515680.627647
[2025-06-04 17:35:33] 2025-06-04 15:15:53,328 | INFO     | intersect: 9215515680.627647
[2025-06-04 17:35:33] 2025-06-04 15:15:53,329 | INFO     | chi2: 0.8545138647949102
[2025-06-04 17:35:33] 2025-06-04 15:15:53,329 | INFO     | current chi2=0.8545138647949102 (change=2.3852783682181236 %)
[2025-06-04 17:35:33] 2025-06-04 15:15:53,329 | INFO     | left removable region: 20
[2025-06-04 17:35:33] 2025-06-04 15:15:53,329 | INFO     | sum of square deviations: 2194675568.0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,331 | INFO     | sum of deviations: 6454936887.5
[2025-06-04 17:35:33] 2025-06-04 15:15:53,331 | INFO     | mean x: 1749043550.5
[2025-06-04 17:35:33] 2025-06-04 15:15:53,331 | INFO     | mean y: 2491946.1927083335
[2025-06-04 17:35:33] 2025-06-04 15:15:53,331 | INFO     | -- intersect: -5141760760.942008
[2025-06-04 17:35:33] 2025-06-04 15:15:53,331 | INFO     | intersect: -5141760760.942008
[2025-06-04 17:35:33] 2025-06-04 15:15:53,332 | INFO     | chi2: 0.0009254147171192072
[2025-06-04 17:35:33] 2025-06-04 15:15:53,332 | INFO     | -- intersect: -5141760760.942008
[2025-06-04 17:35:33] 2025-06-04 15:15:53,332 | INFO     | current memory leak: 2.94 B/s (using 192 data points, chi2=0.00)
[2025-06-04 17:35:33] 2025-06-04 15:15:53,333 | INFO     | ..............................
[2025-06-04 17:35:33] 2025-06-04 15:15:53,333 | INFO     | . Timing measurements:
[2025-06-04 17:35:33] 2025-06-04 15:15:53,333 | INFO     | . get job = 0 s
[2025-06-04 17:35:33] 2025-06-04 15:15:53,333 | INFO     | . initial setup = 4 s
[2025-06-04 17:35:33] 2025-06-04 15:15:53,333 | INFO     | . payload setup = 29 s
[2025-06-04 17:35:33] 2025-06-04 15:15:53,333 | INFO     | . stage-in = 0 s
[2025-06-04 17:35:33] 2025-06-04 15:15:53,334 | INFO     | . payload execution = 13577 s
[2025-06-04 17:35:33] 2025-06-04 15:15:53,334 | INFO     | . stage-out = 3 s
[2025-06-04 17:35:33] 2025-06-04 15:15:53,334 | INFO     | . log creation = 1 s
[2025-06-04 17:35:33] 2025-06-04 15:15:53,334 | INFO     | ..............................
[2025-06-04 17:35:33] 2025-06-04 15:15:53,574 | INFO     | 
[2025-06-04 17:35:33] 2025-06-04 15:15:53,574 | INFO     | job summary report
[2025-06-04 17:35:33] 2025-06-04 15:15:53,574 | INFO     | --------------------------------------------------
[2025-06-04 17:35:33] 2025-06-04 15:15:53,574 | INFO     | PanDA job id: 6678014749
[2025-06-04 17:35:33] 2025-06-04 15:15:53,574 | INFO     | task id: 45006595
[2025-06-04 17:35:33] 2025-06-04 15:15:53,574 | INFO     | errors: (none)
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | pilot state: finished 
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | transexitcode: 0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | exeerrorcode: 0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | exeerrordiag: 
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | exitcode: 0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | exitmsg: OK
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | cpuconsumptiontime: 51050 s
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | nevents: 400
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | neventsw: 0
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | pid: 16953
[2025-06-04 17:35:33] 2025-06-04 15:15:53,575 | INFO     | pgrp: 16953
[2025-06-04 17:35:33] 2025-06-04 15:15:53,576 | INFO     | corecount: 8
[2025-06-04 17:35:33] 2025-06-04 15:15:53,576 | INFO     | event service: False
[2025-06-04 17:35:33] 2025-06-04 15:15:53,576 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 14: 2405446, 22: 2405474, 13610: 2435193, 13615: 2445187, 13616: 2445243, 13706: 2445413}
[2025-06-04 17:35:33] 2025-06-04 15:15:53,576 | INFO     | --------------------------------------------------
[2025-06-04 17:35:33] 2025-06-04 15:15:53,576 | INFO     | 
[2025-06-04 17:35:33] 2025-06-04 15:15:53,576 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-04 17:35:33] 2025-06-04 15:15:54,031 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,032 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,032 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,032 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,032 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,032 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,032 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,032 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,032 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:35:33] 2025-06-04 15:15:54,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,034 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:35:33] 2025-06-04 15:15:54,034 | INFO     | job 6678014749 has completed (purged errors)
[2025-06-04 17:35:33] 2025-06-04 15:15:54,034 | INFO     | overall cleanup function is called
[2025-06-04 17:35:33] 2025-06-04 15:15:55,043 | INFO     | --- collectZombieJob: --- 10, [16953]
[2025-06-04 17:35:33] 2025-06-04 15:15:55,043 | INFO     | zombie collector waiting for pid 16953
[2025-06-04 17:35:33] 2025-06-04 15:15:55,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:35:33] 2025-06-04 15:15:55,043 | INFO     | collected zombie processes
[2025-06-04 17:35:33] 2025-06-04 15:15:55,043 | INFO     | will attempt to kill all subprocesses of pid=16953
[2025-06-04 17:35:33] 2025-06-04 15:15:55,192 | INFO     | process IDs to be killed: [16953] (in reverse order)
[2025-06-04 17:35:33] 2025-06-04 15:15:56,153 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:35:33] 2025-06-04 15:15:56,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:35:33] 2025-06-04 15:15:56,157 | INFO     | did not find any defunct processes belonging to 16953
[2025-06-04 17:35:33] 2025-06-04 15:15:56,160 | INFO     | did not find any defunct processes belonging to 16953
[2025-06-04 17:35:33] 2025-06-04 15:15:56,161 | INFO     | ready for new job
[2025-06-04 17:35:33] 2025-06-04 15:15:56,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:35:33] 2025-06-04 15:15:56,163 | INFO     | **************************************
[2025-06-04 17:35:33] 2025-06-04 15:15:56,163 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:35:33] 2025-06-04 15:15:56,163 | INFO     | **************************************
[2025-06-04 17:35:33] 2025-06-04 15:15:56,163 | INFO     | 
[2025-06-04 17:35:33] 2025-06-04 15:15:56,164 | INFO     | pilot is running in a VM
[2025-06-04 17:35:33] 2025-06-04 15:15:56,164 | INFO     | architecture information:
[2025-06-04 17:35:33] 2025-06-04 15:15:56,165 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:35:33] 2025-06-04 15:15:56,394 | INFO     | cat /etc/os-release:
[2025-06-04 17:35:33] NAME="CentOS Linux"
[2025-06-04 17:35:33] VERSION="7 (Core)"
[2025-06-04 17:35:33] ID="centos"
[2025-06-04 17:35:33] ID_LIKE="rhel fedora"
[2025-06-04 17:35:33] VERSION_ID="7"
[2025-06-04 17:35:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:35:33] ANSI_COLOR="0;31"
[2025-06-04 17:35:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:35:33] HOME_URL="https://www.centos.org/"
[2025-06-04 17:35:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:35:33] 
[2025-06-04 17:35:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:35:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:35:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:35:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:35:33] 
[2025-06-04 17:35:33] 2025-06-04 15:15:56,395 | INFO     | **************************************
[2025-06-04 17:35:33] 2025-06-04 15:15:56,518 | INFO     | PID=3062 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 17:35:33] 2025-06-04 15:15:56,518 | INFO     | .. there are 9 such processes running
[2025-06-04 17:35:33] 2025-06-04 15:15:56,898 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-04 17:35:33] 2025-06-04 15:15:57,139 | INFO     | sufficient remaining disk space (496350789632 B)
[2025-06-04 17:35:33] 2025-06-04 15:15:57,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:35:33] 2025-06-04 15:15:57,140 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:35:33] 2025-06-04 15:15:57,140 | INFO     | update_server=False
[2025-06-04 17:35:33] 2025-06-04 15:15:57,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:35:33] 2025-06-04 15:15:57,140 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 17:35:33] 2025-06-04 15:15:57,141 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:35:33] 2025-06-04 15:15:57,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:35:33] 2025-06-04 15:15:57,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:35:33] 2025-06-04 15:15:57,432 | INFO     | all payload control threads have been joined
[2025-06-04 17:35:33] 2025-06-04 15:15:57,557 | INFO     | all data control threads have been joined
[2025-06-04 17:35:33] 2025-06-04 15:15:57,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:35:33] 2025-06-04 15:15:57,784 | INFO     | aborting loop
[2025-06-04 17:35:33] 2025-06-04 15:15:58,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:35:33] 2025-06-04 15:15:58,146 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:58,242 | INFO     | all job control threads have been joined
[2025-06-04 17:35:33] 2025-06-04 15:15:58,312 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:58,439 | INFO     | [payload] control thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:58,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:58,563 | INFO     | [data] control thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:58,577 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:58,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:35:33] 2025-06-04 15:15:58,790 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:58,801 | INFO     | [job] validate thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:58,873 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:59,116 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:59,248 | INFO     | [job] control thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:59,446 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:59,561 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:59,593 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:15:59,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:35:33] 2025-06-04 15:16:00,036 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:16:03,793 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:35:33] 2025-06-04 15:16:05,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782991251264)>', '<ExcThread(monitor, started 139782554363648)>']
[2025-06-04 17:35:33] 2025-06-04 15:16:05,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:35:33] 2025-06-04 15:16:05,188 | INFO     | [monitor] control thread has ended
[2025-06-04 17:35:33] 2025-06-04 15:16:10,110 | INFO     | all workflow threads have been joined
[2025-06-04 17:35:33] 2025-06-04 15:16:10,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:35:33] 2025-06-04 15:16:10,110 | INFO     | traces error code: 0
[2025-06-04 17:35:33] 2025-06-04 15:16:10,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:35:33] 2025-06-04 15:16:10,434 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:35:33] 2025-06-04 15:16:10,509 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:35:33] 2025-06-04 15:16:10,584 [wrapper] pilotpid: 3062
[2025-06-04 17:35:33] 2025-06-04 15:16:10,686 [wrapper] Pilot exit status: 0
[2025-06-04 17:35:33] 2025-06-04 15:16:11,169 [wrapper] pandaids: 6678014749
[2025-06-04 17:35:33] 2025-06-04 15:16:11,664 [wrapper] cleanup supervisor_pilot 30349 3063
[2025-06-04 17:35:33] 2025-06-04 15:16:11,703 [wrapper] Test setup, not cleaning
[2025-06-04 17:35:33] 2025-06-04 15:16:11,767 [wrapper] apfmon messages muted
[2025-06-04 17:35:33] 2025-06-04 15:16:11,831 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:35:33] 2025-06-04 15:16:11,858 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:35:33]  *** Error codes and diagnostics ***
[2025-06-04 17:35:33]     "exeErrorCode": 0,
[2025-06-04 17:35:33]     "exeErrorDiag": "",
[2025-06-04 17:35:33]     "pilotErrorCode": 0,
[2025-06-04 17:35:33]     "pilotErrorDiag": "",
[2025-06-04 17:35:33]  *** Listing of results directory ***
[2025-06-04 17:35:33] total 395300
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:01 queuedata.json
[2025-06-04 17:35:33] -rwx------. 1 boinc boinc     37140 Jun  3 22:02 runpilot2-wrapper.sh
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc       100 Jun  4 13:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:35:33] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 13:26 run_atlas
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc       105 Jun  4 13:26 job.xml
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc      6392 Jun  4 13:26 init_data.xml
[2025-06-04 17:35:33] -rw-r--r--. 2 boinc boinc 216945017 Jun  4 13:26 EVNT.45006593._001777.pool.root.1
[2025-06-04 17:35:33] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:26 start_atlas.sh
[2025-06-04 17:35:33] drwxrwx--x. 2 boinc boinc        68 Jun  4 13:26 shared
[2025-06-04 17:35:33] -rw-r--r--. 2 boinc boinc    508881 Jun  4 13:26 input.tar.gz
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc         0 Jun  4 13:26 boinc_lockfile
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc      2525 Jun  4 13:26 pandaJob.out
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc    986812 Jun  4 13:26 agis_schedconf.cvmfs.json
[2025-06-04 17:35:33] drwx------. 4 boinc boinc      4096 Jun  4 13:26 pilot3
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc 180906903 Jun  4 17:12 HITS.45006595._044344.pool.root.1
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc       531 Jun  4 17:13 boinc_task_state.xml
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc      1016 Jun  4 17:14 memory_monitor_summary.json
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc   1598969 Jun  4 17:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc    372574 Jun  4 17:14 log.45006595._044344.job.log.tgz.1
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc        95 Jun  4 17:15 pilot_heartbeat.json
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc      7686 Jun  4 17:15 heartbeat.json
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc      4930 Jun  4 17:16 pilotlog.txt
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc   1189752 Jun  4 17:16 log.45006595._044344.job.log.1
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc       357 Jun  4 17:16 output.list
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc       620 Jun  4 17:16 runtime_log
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc   1576960 Jun  4 17:16 result.tar.gz
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc      8659 Jun  4 17:16 runtime_log.err
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc       656 Jun  4 17:16 FVNKDmW1mg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlpZKDmwDTrgn.diag
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc      8192 Jun  4 17:35 boinc_mmap_file
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc        28 Jun  4 17:35 wrapper_checkpoint.txt
[2025-06-04 17:35:33] -rw-r--r--. 1 boinc boinc     20586 Jun  4 17:35 stderr.txt
[2025-06-04 17:35:33] HITS file was successfully produced:
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc 180906903 Jun  4 17:12 shared/HITS.pool.root.1
[2025-06-04 17:35:33]  *** Contents of shared directory: ***
[2025-06-04 17:35:33] total 390588
[2025-06-04 17:35:33] -rw-r--r--. 2 boinc boinc 216945017 Jun  4 13:26 ATLAS.root_0
[2025-06-04 17:35:33] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:26 start_atlas.sh
[2025-06-04 17:35:33] -rw-r--r--. 2 boinc boinc    508881 Jun  4 13:26 input.tar.gz
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc 180906903 Jun  4 17:12 HITS.pool.root.1
[2025-06-04 17:35:33] -rw-------. 1 boinc boinc   1576960 Jun  4 17:16 result.tar.gz
17:35:35 (31734): run_atlas exited; CPU time 51235.705572
17:35:35 (31734): called boinc_finish(0)

</stderr_txt>
]]>

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