Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:03:13 (2610867): wrapper (7.7.26015): starting
20:03:13 (2610867): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 20:03:13] Arguments: --nthreads 10
[2025-06-03 20:03:13] Threads: 10
[2025-06-03 20:03:13] Checking for CVMFS
[2025-06-03 20:03:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:03:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:03:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:03:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:03:14] 2.12.6.0 650483 23024 247620 146761 2 66 29825505 32935936 13491 16776704 0 76818746 99.485 98269072 30775 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 20:03:14] CVMFS is ok
[2025-06-03 20:03:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:03:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:03:14] Further information can be found at the LHC@home message board.
[2025-06-03 20:03:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:03:14] Checking for apptainer binary...
[2025-06-03 20:03:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:03:14] Running /usr/bin/apptainer --version
[2025-06-03 20:03:14] apptainer version 1.4.1-1.el9
[2025-06-03 20:03:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:03:14] c-4-36.aglt2.org
[2025-06-03 20:03:14] apptainer works
[2025-06-03 20:03:14] Set ATHENA_PROC_NUMBER=10
[2025-06-03 20:03:14] Set ATHENA_CORE_NUMBER=10
[2025-06-03 20:03:14] Starting ATLAS job with PandaID=6678014605
[2025-06-03 20:03:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:27:17]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:27:17]  scope=mc23_13p6TeV
[2025-06-03 21:27:17]  status=None
[2025-06-03 21:27:17]  status_code=0
[2025-06-03 21:27:17]  storage_token=
[2025-06-03 21:27:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678014605/log.45006595._044208.job.log.tgz.1
[2025-06-03 21:27:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/ce/log.45006595._044208.job.log.tgz.1
[2025-06-03 21:27:17]  workdir=None
[2025-06-03 21:27:17] ]
[2025-06-03 21:27:17] 2025-06-04 01:26:48,810 | INFO     | transferring file log.45006595._044208.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678014605/log.45006595._044208.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:27:17] 2025-06-04 01:26:48,810 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678014605/log.45006595._044208.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._044208.job
[2025-06-03 21:27:17] 2025-06-04 01:26:48,831 | INFO     | adding to output.list: log.45006595._044208.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/ce/log.45006595._044208.job.log.tg
[2025-06-03 21:27:17] 2025-06-04 01:26:48,832 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:27:17] 2025-06-04 01:26:48,832 | INFO     | summary of transferred files:
[2025-06-03 21:27:17] 2025-06-04 01:26:48,832 | INFO     |  -- lfn=log.45006595._044208.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:27:17] 2025-06-04 01:26:48,832 | INFO     | stage-out finished correctly
[2025-06-03 21:27:17] 2025-06-04 01:26:49,089 | WARNING  | process 2623275 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 21:27:17] 2025-06-04 01:26:49,090 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678014605/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:27:17] 2025-06-04 01:26:49,410 | INFO     | number of running child processes to parent process 2623275: 1
[2025-06-03 21:27:17] 2025-06-04 01:26:49,411 | INFO     | maximum number of monitored processes: 6
[2025-06-03 21:27:17] 2025-06-04 01:26:51,914 | INFO     | monitor loop #367: job 0:6678014605 is in state 'finished'
[2025-06-03 21:27:17] 2025-06-04 01:26:51,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:27:17] 2025-06-04 01:26:52,214 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:27:17] 2025-06-04 01:26:52,605 | INFO     | job 6678014605 has state=finished
[2025-06-03 21:27:17] 2025-06-04 01:26:52,605 | INFO     | preparing for final server update for job 6678014605 in state='finished'
[2025-06-03 21:27:17] 2025-06-04 01:26:52,669 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 21:27:17] 2025-06-04 01:26:52,669 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:27:17] 2025-06-04 01:26:52,669 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:27:17] 2025-06-04 01:26:52,670 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:27:17] 2025-06-04 01:26:52,670 | INFO     | job 6678014605 has finished - writing final server update
[2025-06-03 21:27:17] 2025-06-04 01:26:52,670 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:27:17] 2025-06-04 01:26:52,684 | INFO     | executing command: lscpu
[2025-06-03 21:27:17] 2025-06-04 01:26:52,750 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:27:17] 2025-06-04 01:26:53,527 | INFO     | PID=2614463 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 21:27:17] 2025-06-04 01:26:53,528 | INFO     | .. there are 26 such processes running
[2025-06-03 21:27:17] 2025-06-04 01:26:54,417 | INFO     | monitor loop #368: job 0:6678014605 is in state 'finished'
[2025-06-03 21:27:17] 2025-06-04 01:26:54,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:27:17] 2025-06-04 01:26:56,917 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:27:17] 2025-06-04 01:26:56,917 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678014605/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:27:17] 2025-06-04 01:26:56,918 | INFO     | extracted standard info from prmon json
[2025-06-03 21:27:17] 2025-06-04 01:26:56,918 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:27:17] 2025-06-04 01:26:56,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:27:17] 2025-06-04 01:26:56,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:27:17] 2025-06-04 01:26:56,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:27:17] 2025-06-04 01:26:56,921 | INFO     | monitor loop #369: job 0:6678014605 is in state 'finished'
[2025-06-03 21:27:17] 2025-06-04 01:26:56,921 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:27:17] 2025-06-04 01:26:56,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:27:17] 2025-06-04 01:26:56,922 | INFO     | sum of square deviations: 130793150.0
[2025-06-03 21:27:17] 2025-06-04 01:26:56,922 | INFO     | sum of deviations: 6132714787.999997
[2025-06-03 21:27:17] 2025-06-04 01:26:56,922 | INFO     | mean x: 1748997994.0
[2025-06-03 21:27:17] 2025-06-04 01:26:56,922 | INFO     | mean y: 2381071.3733333335
[2025-06-03 21:27:17] 2025-06-04 01:26:56,922 | INFO     | -- intersect: -82005781144.96698
[2025-06-03 21:27:17] 2025-06-04 01:26:56,923 | INFO     | intersect: -82005781144.96698
[2025-06-03 21:27:17] 2025-06-04 01:26:56,923 | INFO     | chi2: 0.7524542694173848
[2025-06-03 21:27:17] 2025-06-04 01:26:56,923 | INFO     | -- intersect: -82005781144.96698
[2025-06-03 21:27:17] 2025-06-04 01:26:56,923 | INFO     | current memory leak: 46.89 B/s (using 75 data points, chi2=0.75)
[2025-06-03 21:27:17] 2025-06-04 01:26:56,924 | INFO     | ..............................
[2025-06-03 21:27:17] 2025-06-04 01:26:56,924 | INFO     | . Timing measurements:
[2025-06-03 21:27:17] 2025-06-04 01:26:56,924 | INFO     | . get job = 0 s
[2025-06-03 21:27:17] 2025-06-04 01:26:56,924 | INFO     | . initial setup = 2 s
[2025-06-03 21:27:17] 2025-06-04 01:26:56,924 | INFO     | . payload setup = 6 s
[2025-06-03 21:27:17] 2025-06-04 01:26:56,924 | INFO     | . stage-in = 0 s
[2025-06-03 21:27:17] 2025-06-04 01:26:56,924 | INFO     | . payload execution = 4975 s
[2025-06-03 21:27:17] 2025-06-04 01:26:56,924 | INFO     | . stage-out = 0 s
[2025-06-03 21:27:17] 2025-06-04 01:26:56,924 | INFO     | . log creation = 0 s
[2025-06-03 21:27:17] 2025-06-04 01:26:56,925 | INFO     | ..............................
[2025-06-03 21:27:17] 2025-06-04 01:26:57,030 | INFO     | 
[2025-06-03 21:27:17] 2025-06-04 01:26:57,031 | INFO     | job summary report
[2025-06-03 21:27:17] 2025-06-04 01:26:57,031 | INFO     | --------------------------------------------------
[2025-06-03 21:27:17] 2025-06-04 01:26:57,031 | INFO     | PanDA job id: 6678014605
[2025-06-03 21:27:17] 2025-06-04 01:26:57,031 | INFO     | task id: 45006595
[2025-06-03 21:27:17] 2025-06-04 01:26:57,031 | INFO     | errors: (none)
[2025-06-03 21:27:17] 2025-06-04 01:26:57,031 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:27:17] 2025-06-04 01:26:57,031 | INFO     | pilot state: finished 
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | transexitcode: 0
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | exeerrorcode: 0
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | exeerrordiag: 
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | exitcode: 0
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | exitmsg: OK
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | cpuconsumptiontime: 40792 s
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | nevents: 400
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | neventsw: 0
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | pid: 2623275
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | pgrp: 2623275
[2025-06-03 21:27:17] 2025-06-04 01:26:57,032 | INFO     | corecount: 10
[2025-06-03 21:27:17] 2025-06-04 01:26:57,033 | INFO     | event service: False
[2025-06-03 21:27:17] 2025-06-04 01:26:57,033 | INFO     | sizes: {0: 2404906, 1: 2405161, 5: 2405367, 12: 2405423, 4986: 2431622, 4989: 2440563, 4992: 2440747, 4997: 2440917}
[2025-06-03 21:27:17] 2025-06-04 01:26:57,033 | INFO     | --------------------------------------------------
[2025-06-03 21:27:17] 2025-06-04 01:26:57,033 | INFO     | 
[2025-06-03 21:27:17] 2025-06-04 01:26:57,033 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 21:27:17] 2025-06-04 01:26:57,054 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,054 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,054 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,054 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,056 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,056 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:27:17] 2025-06-04 01:26:57,056 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,056 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:27:17] 2025-06-04 01:26:57,056 | INFO     | job 6678014605 has completed (purged errors)
[2025-06-03 21:27:17] 2025-06-04 01:26:57,056 | INFO     | overall cleanup function is called
[2025-06-03 21:27:17] 2025-06-04 01:26:58,064 | INFO     | --- collectZombieJob: --- 10, [2623275]
[2025-06-03 21:27:17] 2025-06-04 01:26:58,064 | INFO     | zombie collector waiting for pid 2623275
[2025-06-03 21:27:17] 2025-06-04 01:26:58,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:27:17] 2025-06-04 01:26:58,064 | INFO     | collected zombie processes
[2025-06-03 21:27:17] 2025-06-04 01:26:58,064 | INFO     | will attempt to kill all subprocesses of pid=2623275
[2025-06-03 21:27:17] 2025-06-04 01:26:58,386 | INFO     | process IDs to be killed: [2623275] (in reverse order)
[2025-06-03 21:27:17] 2025-06-04 01:26:58,484 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:27:17] 2025-06-04 01:26:58,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:27:17] 2025-06-04 01:26:58,497 | INFO     | did not find any defunct processes belonging to 2623275
[2025-06-03 21:27:17] 2025-06-04 01:26:58,509 | INFO     | did not find any defunct processes belonging to 2623275
[2025-06-03 21:27:17] 2025-06-04 01:26:58,509 | INFO     | ready for new job
[2025-06-03 21:27:17] 2025-06-04 01:26:58,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:27:17] 2025-06-04 01:26:58,512 | INFO     | **************************************
[2025-06-03 21:27:17] 2025-06-04 01:26:58,512 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:27:17] 2025-06-04 01:26:58,512 | INFO     | **************************************
[2025-06-03 21:27:17] 2025-06-04 01:26:58,512 | INFO     | 
[2025-06-03 21:27:17] 2025-06-04 01:26:58,526 | INFO     | architecture information:
[2025-06-03 21:27:17] 2025-06-04 01:26:58,526 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:27:17] 2025-06-04 01:26:58,542 | INFO     | cat /etc/os-release:
[2025-06-03 21:27:17] NAME="CentOS Linux"
[2025-06-03 21:27:17] VERSION="7 (Core)"
[2025-06-03 21:27:17] ID="centos"
[2025-06-03 21:27:17] ID_LIKE="rhel fedora"
[2025-06-03 21:27:17] VERSION_ID="7"
[2025-06-03 21:27:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:27:17] ANSI_COLOR="0;31"
[2025-06-03 21:27:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:27:17] HOME_URL="https://www.centos.org/"
[2025-06-03 21:27:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:27:17] 
[2025-06-03 21:27:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:27:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:27:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:27:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:27:17] 
[2025-06-03 21:27:17] 2025-06-04 01:26:58,543 | INFO     | **************************************
[2025-06-03 21:27:17] 2025-06-04 01:26:59,045 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 21:27:17] 2025-06-04 01:26:59,062 | INFO     | sufficient remaining disk space (76520882176 B)
[2025-06-03 21:27:17] 2025-06-04 01:26:59,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:27:17] 2025-06-04 01:26:59,062 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:27:17] 2025-06-04 01:26:59,063 | INFO     | update_server=False
[2025-06-03 21:27:17] 2025-06-04 01:26:59,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:27:17] 2025-06-04 01:26:59,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:27:17] 2025-06-04 01:26:59,257 | INFO     | all data control threads have been joined
[2025-06-03 21:27:17] 2025-06-04 01:26:59,425 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 21:27:17] 2025-06-04 01:26:59,425 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 21:27:17] 2025-06-04 01:26:59,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:27:17] 2025-06-04 01:26:59,426 | INFO     | will abort loop
[2025-06-03 21:27:17] 2025-06-04 01:26:59,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:27:17] 2025-06-04 01:26:59,458 | INFO     | all job control threads have been joined
[2025-06-03 21:27:17] 2025-06-04 01:26:59,544 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:27:17] 2025-06-04 01:26:59,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:27:17] 2025-06-04 01:26:59,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:27:17] 2025-06-04 01:27:00,068 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:00,163 | INFO     | all payload control threads have been joined
[2025-06-03 21:27:17] 2025-06-04 01:27:00,175 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:00,258 | INFO     | [data] control thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:00,305 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:00,307 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:00,428 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:00,463 | INFO     | [job] control thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:00,466 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:00,650 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:01,028 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:01,169 | INFO     | [payload] control thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:01,415 | INFO     | [job] validate thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:01,462 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:02,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:27:17] 2025-06-04 01:27:03,045 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:03,069 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:09,987 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:27:17] 2025-06-04 01:27:10,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:27:17] 2025-06-04 01:27:12,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134726416192)>', '<ExcThread(monitor, started 140134095771392)>']
[2025-06-03 21:27:17] 2025-06-04 01:27:12,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:27:17] 2025-06-04 01:27:12,601 | INFO     | [monitor] control thread has ended
[2025-06-03 21:27:17] 2025-06-04 01:27:17,233 | INFO     | all workflow threads have been joined
[2025-06-03 21:27:17] 2025-06-04 01:27:17,234 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:27:17] 2025-06-04 01:27:17,234 | INFO     | traces error code: 0
[2025-06-03 21:27:17] 2025-06-04 01:27:17,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:27:17] 2025-06-04 01:27:17,397 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:27:17] 2025-06-04 01:27:17,400 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:27:17] 2025-06-04 01:27:17,404 [wrapper] pilotpid: 2614463
[2025-06-03 21:27:17] 2025-06-04 01:27:17,407 [wrapper] Pilot exit status: 0
[2025-06-03 21:27:17] 2025-06-04 01:27:17,418 [wrapper] pandaids: 6678014605
[2025-06-03 21:27:17] 2025-06-04 01:27:17,485 [wrapper] cleanup supervisor_pilot 2898677 2614464
[2025-06-03 21:27:17] 2025-06-04 01:27:17,489 [wrapper] Test setup, not cleaning
[2025-06-03 21:27:17] 2025-06-04 01:27:17,492 [wrapper] apfmon messages muted
[2025-06-03 21:27:17] 2025-06-04 01:27:17,495 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:27:17] 2025-06-04 01:27:17,498 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:27:17]  *** Error codes and diagnostics ***
[2025-06-03 21:27:17]     "exeErrorCode": 0,
[2025-06-03 21:27:17]     "exeErrorDiag": "",
[2025-06-03 21:27:17]     "pilotErrorCode": 0,
[2025-06-03 21:27:17]     "pilotErrorDiag": "",
[2025-06-03 21:27:17]  *** Listing of results directory ***
[2025-06-03 21:27:17] total 385248
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 15:41 pilot3.tar.gz
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:54 queuedata.json
[2025-06-03 21:27:17] -rwx------. 1 boincer umatlas     37140 Jun  3 15:55 runpilot2-wrapper.sh
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas       100 Jun  3 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:27:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 20:03 run_atlas
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas       105 Jun  3 20:03 job.xml
[2025-06-03 21:27:17] -rw-r--r--. 2 boincer umatlas 214401212 Jun  3 20:03 EVNT.45006593._001771.pool.root.1
[2025-06-03 21:27:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:03 start_atlas.sh
[2025-06-03 21:27:17] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 20:03 shared
[2025-06-03 21:27:17] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 20:03 input.tar.gz
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas         0 Jun  3 20:03 boinc_lockfile
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 20:03 pandaJob.out
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas    986077 Jun  3 20:03 agis_schedconf.cvmfs.json
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas   1603667 Jun  3 20:03 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:27:17] drwx------. 4 boincer umatlas      4096 Jun  3 20:03 pilot3
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas      6674 Jun  3 21:18 init_data.xml
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas 174592276 Jun  3 21:26 HITS.45006595._044208.pool.root.1
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas       529 Jun  3 21:26 boinc_task_state.xml
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas        95 Jun  3 21:26 pilot_heartbeat.json
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas      1036 Jun  3 21:26 memory_monitor_summary.json
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas    347639 Jun  3 21:26 log.45006595._044208.job.log.tgz.1
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas      7715 Jun  3 21:26 heartbeat.json
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas        27 Jun  3 21:27 wrapper_checkpoint.txt
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:27 boinc_mmap_file
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas      4611 Jun  3 21:27 pilotlog.txt
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas    486868 Jun  3 21:27 log.45006595._044208.job.log.1
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas       357 Jun  3 21:27 output.list
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:27 runtime_log
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas    849920 Jun  3 21:27 result.tar.gz
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas       651 Jun  3 21:27 8pJMDmUumg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmywlKDm1YAPFn.diag
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas      8651 Jun  3 21:27 runtime_log.err
[2025-06-03 21:27:17] -rw-r--r--. 1 boincer umatlas     21953 Jun  3 21:27 stderr.txt
[2025-06-03 21:27:17] HITS file was successfully produced:
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas 174592276 Jun  3 21:26 shared/HITS.pool.root.1
[2025-06-03 21:27:17]  *** Contents of shared directory: ***
[2025-06-03 21:27:17] total 381236
[2025-06-03 21:27:17] -rw-r--r--. 2 boincer umatlas 214401212 Jun  3 20:03 ATLAS.root_0
[2025-06-03 21:27:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 20:03 start_atlas.sh
[2025-06-03 21:27:17] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 20:03 input.tar.gz
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas 174592276 Jun  3 21:26 HITS.pool.root.1
[2025-06-03 21:27:17] -rw-------. 1 boincer umatlas    849920 Jun  3 21:27 result.tar.gz
21:27:39 (2610867): run_atlas exited; CPU time 40877.655081
21:27:39 (2610867): called boinc_finish(0)

</stderr_txt>
]]>

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