Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:42:50 (1714036): wrapper (7.7.26015): starting
19:42:50 (1714036): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 19:42:50] Arguments: --nthreads 10
[2025-06-03 19:42:50] Threads: 10
[2025-06-03 19:42:50] Checking for CVMFS
[2025-06-03 19:42:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 19:42:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 19:42:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 19:42:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 19:42:51] 2.12.6.0 4596 573 84948 146761 0 66 26888212 32935936 6088 16776704 0 3178606 99.925 706808 38827 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 19:42:51] CVMFS is ok
[2025-06-03 19:42:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:42:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:42:51] Further information can be found at the LHC@home message board.
[2025-06-03 19:42:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:42:51] Checking for apptainer binary...
[2025-06-03 19:42:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 19:42:51] Running /usr/bin/apptainer --version
[2025-06-03 19:42:51] apptainer version 1.4.1-1.el9
[2025-06-03 19:42:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:42:51] c-8-1.aglt2.org
[2025-06-03 19:42:51] apptainer works
[2025-06-03 19:42:51] Set ATHENA_PROC_NUMBER=10
[2025-06-03 19:42:51] Set ATHENA_CORE_NUMBER=10
[2025-06-03 19:42:51] Starting ATLAS job with PandaID=6665990717
[2025-06-03 19:42:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:16:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:16:44]  filetype=log
[2025-06-03 21:16:44]  guid=6abd1eba-192d-457d-a7d5-84c18536cd71
[2025-06-03 21:16:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 21:16:44]  is_altstaged=None
[2025-06-03 21:16:44]  is_tar=False
[2025-06-03 21:16:44]  lfn=log.44871837._052025.job.log.tgz.1
[2025-06-03 21:16:44]  mtime=0
[2025-06-03 21:16:44]  protocol_id=None
[2025-06-03 21:16:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 21:16:44]  replicas=None
[2025-06-03 21:16:44]  scope=mc23_13p6TeV
[2025-06-03 21:16:44]  status=None
[2025-06-03 21:16:44]  status_code=0
[2025-06-03 21:16:44]  storage_token=
[2025-06-03 21:16:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6665990717/log.44871837._052025.job.log.tgz.1
[2025-06-03 21:16:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/9f/log.44871837._052025.job.log.tgz.1
[2025-06-03 21:16:44]  workdir=None
[2025-06-03 21:16:44] ]
[2025-06-03 21:16:44] 2025-06-04 01:16:26,865 | INFO     | transferring file log.44871837._052025.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6665990717/log.44871837._052025.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 21:16:44] 2025-06-04 01:16:26,865 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6665990717/log.44871837._052025.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._052025.job
[2025-06-03 21:16:44] 2025-06-04 01:16:26,877 | INFO     | adding to output.list: log.44871837._052025.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/9f/log.44871837._052025.job.log.tg
[2025-06-03 21:16:44] 2025-06-04 01:16:26,878 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 21:16:44] 2025-06-04 01:16:26,878 | INFO     | summary of transferred files:
[2025-06-03 21:16:44] 2025-06-04 01:16:26,878 | INFO     |  -- lfn=log.44871837._052025.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 21:16:44] 2025-06-04 01:16:26,878 | INFO     | stage-out finished correctly
[2025-06-03 21:16:44] 2025-06-04 01:16:28,730 | INFO     | monitor loop #407: job 0:6665990717 is in state 'finished'
[2025-06-03 21:16:44] 2025-06-04 01:16:28,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:16:44] 2025-06-04 01:16:29,363 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 21:16:44] 2025-06-04 01:16:29,418 | INFO     | job 6665990717 has state=finished
[2025-06-03 21:16:44] 2025-06-04 01:16:29,418 | INFO     | preparing for final server update for job 6665990717 in state='finished'
[2025-06-03 21:16:44] 2025-06-04 01:16:29,419 | INFO     | this job has now completed (state=finished)
[2025-06-03 21:16:44] 2025-06-04 01:16:29,419 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 21:16:44] 2025-06-04 01:16:29,419 | INFO     | log transfer has been attempted: DONE
[2025-06-03 21:16:44] 2025-06-04 01:16:29,419 | INFO     | job 6665990717 has finished - writing final server update
[2025-06-03 21:16:44] 2025-06-04 01:16:29,420 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:16:44] 2025-06-04 01:16:29,435 | INFO     | executing command: lscpu
[2025-06-03 21:16:44] 2025-06-04 01:16:29,488 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:16:44] 2025-06-04 01:16:31,232 | INFO     | monitor loop #408: job 0:6665990717 is in state 'finished'
[2025-06-03 21:16:44] 2025-06-04 01:16:31,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:16:44] 2025-06-04 01:16:32,112 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:16:44] 2025-06-04 01:16:32,112 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665990717/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:16:44] 2025-06-04 01:16:32,113 | INFO     | extracted standard info from prmon json
[2025-06-03 21:16:44] 2025-06-04 01:16:32,113 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:16:44] 2025-06-04 01:16:32,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:16:44] 2025-06-04 01:16:32,114 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:16:44] 2025-06-04 01:16:32,114 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:16:44] 2025-06-04 01:16:32,115 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:16:44] 2025-06-04 01:16:32,115 | INFO     | sum of square deviations: 190401862.98823565
[2025-06-03 21:16:44] 2025-06-04 01:16:32,115 | INFO     | sum of deviations: -5130238624.741174
[2025-06-03 21:16:44] 2025-06-04 01:16:32,116 | INFO     | mean x: 1748997068.0117648
[2025-06-03 21:16:44] 2025-06-04 01:16:32,116 | INFO     | mean y: 2386269.7411764706
[2025-06-03 21:16:44] 2025-06-04 01:16:32,116 | INFO     | -- intersect: 47127830170.610054
[2025-06-03 21:16:44] 2025-06-04 01:16:32,116 | INFO     | intersect: 47127830170.610054
[2025-06-03 21:16:44] 2025-06-04 01:16:32,116 | INFO     | chi2: 0.9580528070925782
[2025-06-03 21:16:44] 2025-06-04 01:16:32,116 | INFO     | -- intersect: 47127830170.610054
[2025-06-03 21:16:44] 2025-06-04 01:16:32,116 | INFO     | current memory leak: -26.94 B/s (using 85 data points, chi2=0.96)
[2025-06-03 21:16:44] 2025-06-04 01:16:32,116 | INFO     | ..............................
[2025-06-03 21:16:44] 2025-06-04 01:16:32,116 | INFO     | . Timing measurements:
[2025-06-03 21:16:44] 2025-06-04 01:16:32,117 | INFO     | . get job = 0 s
[2025-06-03 21:16:44] 2025-06-04 01:16:32,117 | INFO     | . initial setup = 3 s
[2025-06-03 21:16:44] 2025-06-04 01:16:32,117 | INFO     | . payload setup = 4 s
[2025-06-03 21:16:44] 2025-06-04 01:16:32,117 | INFO     | . stage-in = 0 s
[2025-06-03 21:16:44] 2025-06-04 01:16:32,117 | INFO     | . payload execution = 5584 s
[2025-06-03 21:16:44] 2025-06-04 01:16:32,117 | INFO     | . stage-out = 0 s
[2025-06-03 21:16:44] 2025-06-04 01:16:32,117 | INFO     | . log creation = 0 s
[2025-06-03 21:16:44] 2025-06-04 01:16:32,117 | INFO     | ..............................
[2025-06-03 21:16:44] 2025-06-04 01:16:32,174 | INFO     | 
[2025-06-03 21:16:44] 2025-06-04 01:16:32,174 | INFO     | job summary report
[2025-06-03 21:16:44] 2025-06-04 01:16:32,174 | INFO     | --------------------------------------------------
[2025-06-03 21:16:44] 2025-06-04 01:16:32,174 | INFO     | PanDA job id: 6665990717
[2025-06-03 21:16:44] 2025-06-04 01:16:32,174 | INFO     | task id: 44871837
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | errors: (none)
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | pilot state: finished 
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | transexitcode: 0
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | exeerrorcode: 0
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | exeerrordiag: 
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | exitcode: 0
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | exitmsg: OK
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | cpuconsumptiontime: 44782 s
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | nevents: 400
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | neventsw: 0
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | pid: 1724385
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | pgrp: 1724385
[2025-06-03 21:16:44] 2025-06-04 01:16:32,175 | INFO     | corecount: 10
[2025-06-03 21:16:44] 2025-06-04 01:16:32,176 | INFO     | event service: False
[2025-06-03 21:16:44] 2025-06-04 01:16:32,176 | INFO     | sizes: {0: 2405234, 3: 2405440, 11: 2405468, 5591: 2432018, 5593: 2440987, 5595: 2441043, 5598: 2441341}
[2025-06-03 21:16:44] 2025-06-04 01:16:32,176 | INFO     | --------------------------------------------------
[2025-06-03 21:16:44] 2025-06-04 01:16:32,176 | INFO     | 
[2025-06-03 21:16:44] 2025-06-04 01:16:32,176 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 21:16:44] 2025-06-04 01:16:32,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,188 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,189 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,190 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:16:44] 2025-06-04 01:16:32,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,190 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:16:44] 2025-06-04 01:16:32,191 | INFO     | job 6665990717 has completed (purged errors)
[2025-06-03 21:16:44] 2025-06-04 01:16:32,191 | INFO     | overall cleanup function is called
[2025-06-03 21:16:44] 2025-06-04 01:16:32,394 | INFO     | PID=1717793 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 21:16:44] 2025-06-04 01:16:32,394 | INFO     | .. there are 13 such processes running
[2025-06-03 21:16:44] 2025-06-04 01:16:33,199 | INFO     | --- collectZombieJob: --- 10, [1724385]
[2025-06-03 21:16:44] 2025-06-04 01:16:33,199 | INFO     | zombie collector waiting for pid 1724385
[2025-06-03 21:16:44] 2025-06-04 01:16:33,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:16:44] 2025-06-04 01:16:33,199 | INFO     | collected zombie processes
[2025-06-03 21:16:44] 2025-06-04 01:16:33,200 | INFO     | will attempt to kill all subprocesses of pid=1724385
[2025-06-03 21:16:44] 2025-06-04 01:16:33,385 | INFO     | process IDs to be killed: [1724385] (in reverse order)
[2025-06-03 21:16:44] 2025-06-04 01:16:33,434 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:16:44] 2025-06-04 01:16:33,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:16:44] 2025-06-04 01:16:33,440 | INFO     | did not find any defunct processes belonging to 1724385
[2025-06-03 21:16:44] 2025-06-04 01:16:33,446 | INFO     | did not find any defunct processes belonging to 1724385
[2025-06-03 21:16:44] 2025-06-04 01:16:33,446 | INFO     | ready for new job
[2025-06-03 21:16:44] 2025-06-04 01:16:33,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:16:44] 2025-06-04 01:16:33,448 | INFO     | **************************************
[2025-06-03 21:16:44] 2025-06-04 01:16:33,448 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:16:44] 2025-06-04 01:16:33,448 | INFO     | **************************************
[2025-06-03 21:16:44] 2025-06-04 01:16:33,448 | INFO     | 
[2025-06-03 21:16:44] 2025-06-04 01:16:33,461 | INFO     | architecture information:
[2025-06-03 21:16:44] 2025-06-04 01:16:33,462 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:16:44] 2025-06-04 01:16:33,471 | INFO     | cat /etc/os-release:
[2025-06-03 21:16:44] NAME="CentOS Linux"
[2025-06-03 21:16:44] VERSION="7 (Core)"
[2025-06-03 21:16:44] ID="centos"
[2025-06-03 21:16:44] ID_LIKE="rhel fedora"
[2025-06-03 21:16:44] VERSION_ID="7"
[2025-06-03 21:16:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:16:44] ANSI_COLOR="0;31"
[2025-06-03 21:16:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:16:44] HOME_URL="https://www.centos.org/"
[2025-06-03 21:16:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:16:44] 
[2025-06-03 21:16:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:16:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:16:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:16:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:16:44] 
[2025-06-03 21:16:44] 2025-06-04 01:16:33,471 | INFO     | **************************************
[2025-06-03 21:16:44] 2025-06-04 01:16:33,974 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 21:16:44] 2025-06-04 01:16:33,984 | INFO     | sufficient remaining disk space (76533465088 B)
[2025-06-03 21:16:44] 2025-06-04 01:16:33,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:16:44] 2025-06-04 01:16:33,984 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:16:44] 2025-06-04 01:16:33,984 | INFO     | update_server=False
[2025-06-03 21:16:44] 2025-06-04 01:16:33,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:16:44] 2025-06-04 01:16:33,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:16:44] 2025-06-04 01:16:34,400 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:16:44] 2025-06-04 01:16:34,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:16:44] 2025-06-04 01:16:34,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:16:44] 2025-06-04 01:16:34,557 | INFO     | all payload control threads have been joined
[2025-06-03 21:16:44] 2025-06-04 01:16:34,600 | INFO     | all data control threads have been joined
[2025-06-03 21:16:44] 2025-06-04 01:16:34,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:16:44] 2025-06-04 01:16:34,740 | INFO     | aborting loop
[2025-06-03 21:16:44] 2025-06-04 01:16:34,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:16:44] 2025-06-04 01:16:34,985 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:34,986 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:35,077 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:35,086 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:35,369 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:35,385 | INFO     | all job control threads have been joined
[2025-06-03 21:16:44] 2025-06-04 01:16:35,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:16:44] 2025-06-04 01:16:35,562 | INFO     | [payload] control thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:35,603 | INFO     | [data] control thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:35,668 | INFO     | [job] validate thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:35,700 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:35,745 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:35,947 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:36,120 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:36,359 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:36,391 | INFO     | [job] control thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:36,951 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:39,427 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:16:44] 2025-06-04 01:16:39,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001386616640)>', '<ExcThread(monitor, started 140000607848192)>']
[2025-06-03 21:16:44] 2025-06-04 01:16:40,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:16:44] 2025-06-04 01:16:40,430 | INFO     | [monitor] control thread has ended
[2025-06-03 21:16:44] 2025-06-04 01:16:44,658 | INFO     | all workflow threads have been joined
[2025-06-03 21:16:44] 2025-06-04 01:16:44,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:16:44] 2025-06-04 01:16:44,659 | INFO     | traces error code: 0
[2025-06-03 21:16:44] 2025-06-04 01:16:44,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:16:44] 2025-06-04 01:16:44,755 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:16:44] 2025-06-04 01:16:44,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:16:44] 2025-06-04 01:16:44,759 [wrapper] pilotpid: 1717793
[2025-06-03 21:16:44] 2025-06-04 01:16:44,761 [wrapper] Pilot exit status: 0
[2025-06-03 21:16:44] 2025-06-04 01:16:44,768 [wrapper] pandaids: 6665990717
[2025-06-03 21:16:44] 2025-06-04 01:16:44,801 [wrapper] cleanup supervisor_pilot 2055292 1717794
[2025-06-03 21:16:44] 2025-06-04 01:16:44,803 [wrapper] Test setup, not cleaning
[2025-06-03 21:16:44] 2025-06-04 01:16:44,805 [wrapper] apfmon messages muted
[2025-06-03 21:16:44] 2025-06-04 01:16:44,807 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:16:44] 2025-06-04 01:16:44,808 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:16:44]  *** Error codes and diagnostics ***
[2025-06-03 21:16:44]     "exeErrorCode": 0,
[2025-06-03 21:16:44]     "exeErrorDiag": "",
[2025-06-03 21:16:44]     "pilotErrorCode": 0,
[2025-06-03 21:16:44]     "pilotErrorDiag": "",
[2025-06-03 21:16:44]  *** Listing of results directory ***
[2025-06-03 21:16:44] total 412280
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas    495897 May 26 09:12 pilot3.tar.gz
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas      5111 May 26 09:54 queuedata.json
[2025-06-03 21:16:44] -rwx------. 1 boincer umatlas     37140 May 26 09:56 runpilot2-wrapper.sh
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas       100 Jun  3 19:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:16:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 19:42 run_atlas
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas       105 Jun  3 19:42 job.xml
[2025-06-03 21:16:44] -rw-r--r--. 2 boincer umatlas 223213673 Jun  3 19:42 EVNT.44871834._002070.pool.root.1
[2025-06-03 21:16:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 19:42 start_atlas.sh
[2025-06-03 21:16:44] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 19:42 shared
[2025-06-03 21:16:44] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 19:42 input.tar.gz
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas         0 Jun  3 19:42 boinc_lockfile
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas      2559 Jun  3 19:42 pandaJob.out
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas    986077 Jun  3 19:42 agis_schedconf.cvmfs.json
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas   1603667 Jun  3 19:42 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:16:44] drwx------. 4 boincer umatlas      4096 Jun  3 19:43 pilot3
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas      6657 Jun  3 21:11 init_data.xml
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas        95 Jun  3 21:15 pilot_heartbeat.json
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas 193323047 Jun  3 21:15 HITS.44871837._052025.pool.root.1
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas       529 Jun  3 21:16 boinc_task_state.xml
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas      1030 Jun  3 21:16 memory_monitor_summary.json
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas    360755 Jun  3 21:16 log.44871837._052025.job.log.tgz.1
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas      7710 Jun  3 21:16 heartbeat.json
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas        27 Jun  3 21:16 wrapper_checkpoint.txt
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:16 boinc_mmap_file
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas      4353 Jun  3 21:16 pilotlog.txt
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas    538603 Jun  3 21:16 log.44871837._052025.job.log.1
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas       357 Jun  3 21:16 output.list
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:16 runtime_log
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas    921600 Jun  3 21:16 result.tar.gz
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas      8646 Jun  3 21:16 runtime_log.err
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas       651 Jun  3 21:16 pYUMDmkUnd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4xWKDmuLaWDo.diag
[2025-06-03 21:16:44] -rw-r--r--. 1 boincer umatlas     21299 Jun  3 21:16 stderr.txt
[2025-06-03 21:16:44] HITS file was successfully produced:
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas 193323047 Jun  3 21:15 shared/HITS.pool.root.1
[2025-06-03 21:16:44]  *** Contents of shared directory: ***
[2025-06-03 21:16:44] total 408200
[2025-06-03 21:16:44] -rw-r--r--. 2 boincer umatlas 223213673 Jun  3 19:42 ATLAS.root_0
[2025-06-03 21:16:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 19:42 start_atlas.sh
[2025-06-03 21:16:44] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 19:42 input.tar.gz
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas 193323047 Jun  3 21:15 HITS.pool.root.1
[2025-06-03 21:16:44] -rw-------. 1 boincer umatlas    921600 Jun  3 21:16 result.tar.gz
21:16:46 (1714036): run_atlas exited; CPU time 44919.470390
21:16:46 (1714036): called boinc_finish(0)

</stderr_txt>
]]>

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