Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:40:53 (2707171): wrapper (7.7.26015): starting
16:40:53 (2707171): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 16:40:53] Arguments: --nthreads 12
[2025-06-03 16:40:53] Threads: 12
[2025-06-03 16:40:53] Checking for CVMFS
[2025-06-03 16:40:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:40:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:40:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:40:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:40:53] 2.11.5.0 4072295 32281 219272 146761 1 473 23241243 45568000 17532 130560 0 323864029 99.793 207597285 19386 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 16:40:53] CVMFS is ok
[2025-06-03 16:40:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:40:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:40:53] Further information can be found at the LHC@home message board.
[2025-06-03 16:40:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:40:53] Checking for apptainer binary...
[2025-06-03 16:40:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:40:53] Running /usr/bin/apptainer --version
[2025-06-03 16:40:54] apptainer version 1.4.0-1.el9
[2025-06-03 16:40:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:40:54] wns0037.triumf.lcg
[2025-06-03 16:40:54] apptainer works
[2025-06-03 16:40:54] Set ATHENA_PROC_NUMBER=12
[2025-06-03 16:40:54] Set ATHENA_CORE_NUMBER=12
[2025-06-03 16:40:54] Starting ATLAS job with PandaID=6678074927
[2025-06-03 16:40:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:45:35]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | wrong length of table data, x=[1748994126.0], y=[924.0] (must be same and length>=4)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | ..............................
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . Timing measurements:
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . get job = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . initial setup = 4 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . payload setup = 7 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . stage-in = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . payload execution = 50 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . stage-out = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . log creation = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | ..............................
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678074927/pilotlog.txt
[2025-06-03 16:45:35] 2025-06-03 23:45:02,535 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 16:45:35] - Log from pilotlog.txt -
[2025-06-03 16:45:35] 2025-06-03 23:45:02,504 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678074927/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,504 | INFO     | extracted standard info from prmon json
[2025-06-03 16:45:35] 2025-06-03 23:45:02,504 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | wrong length of table data, x=[1748994126.0], y=[924.0] (must be same and length>=4)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | ..............................
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . Timing measurements:
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . get job = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . initial setup = 4 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . payload setup = 7 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . stage-in = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . payload execution = 50 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . stage-out = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . log creation = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | ..............................
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678074927/pilotlog.txt
[2025-06-03 16:45:35] 2025-06-03 23:45:02,535 | WARNING  | 
[2025-06-03 16:45:35] [begin log extracts]
[2025-06-03 16:45:35] - Log from pilotlog.txt -
[2025-06-03 16:45:35] 2025-06-03 23:45:02,504 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678074927/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,504 | INFO     | extracted standard info from prmon json
[2025-06-03 16:45:35] 2025-06-03 23:45:02,504 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:45:35] 2025-06-03 23:45:02,505 | WARNING  | wrong length of table data, x=[1748994126.0], y=[924.0] (must be same and length>=4)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | ..............................
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . Timing measurements:
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . get job = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . initial setup = 4 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . payload setup = 7 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . stage-in = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . payload execution = 50 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . stage-out = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | . log creation = 0 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | ..............................
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 16:45:35] 2025-06-03 23:45:02,506 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678074927/pilotlog.txt
[2025-06-03 16:45:35] [end log extracts]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,535 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,536 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 16:45:35] 2025-06-03 23:45:02,597 | INFO     | 
[2025-06-03 16:45:35] 2025-06-03 23:45:02,597 | INFO     | job summary report
[2025-06-03 16:45:35] 2025-06-03 23:45:02,597 | INFO     | --------------------------------------------------
[2025-06-03 16:45:35] 2025-06-03 23:45:02,597 | INFO     | PanDA job id: 6678074927
[2025-06-03 16:45:35] 2025-06-03 23:45:02,597 | INFO     | task id: 45006595
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 16:42:36,913 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | pilot state: failed 
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | transexitcode: 65
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | exeerrorcode: 65
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | exitcode: 65
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | nevents: 0
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | neventsw: 0
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | pid: 2719024
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | pgrp: 2719024
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | corecount: 12
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | event service: False
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | sizes: {0: 2405522, 11: 2405522, 12: 2405812, 22: 2405840, 61: 2429149, 62: 2429125, 63: 2433516, 66: 2433544, 197: 2433710}
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | --------------------------------------------------
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | 
[2025-06-03 16:45:35] 2025-06-03 23:45:02,598 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 16:45:35] 2025-06-03 23:45:02,646 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,648 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:45:35] 2025-06-03 23:45:02,648 | INFO     | job 6678074927 has completed (purged errors)
[2025-06-03 16:45:35] 2025-06-03 23:45:02,648 | INFO     | overall cleanup function is called
[2025-06-03 16:45:35] 2025-06-03 23:45:03,655 | INFO     | --- collectZombieJob: --- 10, [2719024]
[2025-06-03 16:45:35] 2025-06-03 23:45:03,655 | INFO     | zombie collector waiting for pid 2719024
[2025-06-03 16:45:35] 2025-06-03 23:45:03,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:45:35] 2025-06-03 23:45:03,655 | INFO     | collected zombie processes
[2025-06-03 16:45:35] 2025-06-03 23:45:03,655 | INFO     | will attempt to kill all subprocesses of pid=2719024
[2025-06-03 16:45:35] 2025-06-03 23:45:03,928 | INFO     | process IDs to be killed: [2719024] (in reverse order)
[2025-06-03 16:45:35] 2025-06-03 23:45:04,093 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:45:35] 2025-06-03 23:45:04,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:45:35] 2025-06-03 23:45:04,129 | INFO     | did not find any defunct processes belonging to 2719024
[2025-06-03 16:45:35] 2025-06-03 23:45:04,154 | INFO     | did not find any defunct processes belonging to 2719024
[2025-06-03 16:45:35] 2025-06-03 23:45:04,154 | INFO     | ready for new job
[2025-06-03 16:45:35] 2025-06-03 23:45:04,155 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:45:35] 2025-06-03 23:45:04,156 | INFO     | ***************************************
[2025-06-03 16:45:35] 2025-06-03 23:45:04,156 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-03 16:45:35] 2025-06-03 23:45:04,156 | INFO     | ***************************************
[2025-06-03 16:45:35] 2025-06-03 23:45:04,156 | INFO     | 
[2025-06-03 16:45:35] 2025-06-03 23:45:04,160 | INFO     | architecture information:
[2025-06-03 16:45:35] 2025-06-03 23:45:04,162 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:45:35] 2025-06-03 23:45:04,175 | INFO     | cat /etc/os-release:
[2025-06-03 16:45:35] NAME="CentOS Linux"
[2025-06-03 16:45:35] VERSION="7 (Core)"
[2025-06-03 16:45:35] ID="centos"
[2025-06-03 16:45:35] ID_LIKE="rhel fedora"
[2025-06-03 16:45:35] VERSION_ID="7"
[2025-06-03 16:45:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:45:35] ANSI_COLOR="0;31"
[2025-06-03 16:45:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:45:35] HOME_URL="https://www.centos.org/"
[2025-06-03 16:45:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:45:35] 
[2025-06-03 16:45:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:45:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:45:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:45:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:45:35] 
[2025-06-03 16:45:35] 2025-06-03 23:45:04,175 | INFO     | ***************************************
[2025-06-03 16:45:35] 2025-06-03 23:45:04,679 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 16:45:35] 2025-06-03 23:45:04,692 | INFO     | sufficient remaining disk space (1726479335424 B)
[2025-06-03 16:45:35] 2025-06-03 23:45:04,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:45:35] 2025-06-03 23:45:04,693 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:45:35] 2025-06-03 23:45:04,693 | INFO     | update_server=False
[2025-06-03 16:45:35] 2025-06-03 23:45:04,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:45:35] 2025-06-03 23:45:04,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:45:35] 2025-06-03 23:45:04,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:45:35] 2025-06-03 23:45:04,694 | INFO     | aborting loop
[2025-06-03 16:45:35] 2025-06-03 23:45:04,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:45:35] 2025-06-03 23:45:05,055 | INFO     | all data control threads have been joined
[2025-06-03 16:45:35] 2025-06-03 23:45:05,560 | INFO     | all job control threads have been joined
[2025-06-03 16:45:35] 2025-06-03 23:45:05,699 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:05,703 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:05,715 | INFO     | all payload control threads have been joined
[2025-06-03 16:45:35] 2025-06-03 23:45:05,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,061 | INFO     | [data] control thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,129 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,271 | INFO     | [job] validate thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,446 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,508 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,571 | INFO     | [job] control thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,679 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,721 | INFO     | [payload] control thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,725 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:06,798 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:07,261 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:07,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:45:35] 2025-06-03 23:45:08,620 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:08,702 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:45:35] 2025-06-03 23:45:09,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335972030272)>', '<ExcThread(monitor, started 140335137142528)>']
[2025-06-03 16:45:35] 2025-06-03 23:45:14,948 | INFO     | all workflow threads have been joined
[2025-06-03 16:45:35] 2025-06-03 23:45:14,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:45:35] 2025-06-03 23:45:14,948 | INFO     | traces error code: 0
[2025-06-03 16:45:35] 2025-06-03 23:45:14,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:45:35] 2025-06-03 23:45:34,286 | INFO     | PID=2710754 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 16:45:35] 2025-06-03 23:45:34,287 | INFO     | .. there are 28 such processes running
[2025-06-03 16:45:35] 2025-06-03 23:45:34,287 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:45:35] 2025-06-03 23:45:34,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:45:35] 2025-06-03 23:45:34,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:45:35] 2025-06-03 23:45:34,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:45:35] 2025-06-03 23:45:34,288 | CRITICAL | thread 'MainThread' is not alive
[2025-06-03 16:45:35] 2025-06-03 23:45:34,288 | INFO     | [monitor] control thread has ended
[2025-06-03 16:45:35] 2025-06-03 23:45:34,414 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:45:35] 2025-06-03 23:45:34,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:45:35] 2025-06-03 23:45:34,474 [wrapper] pilotpid: 2710754
[2025-06-03 16:45:35] 2025-06-03 23:45:34,487 [wrapper] Pilot exit status: 0
[2025-06-03 16:45:35] 2025-06-03 23:45:34,538 [wrapper] pandaids: 6678074927
[2025-06-03 16:45:35] 2025-06-03 23:45:34,645 [wrapper] cleanup supervisor_pilot 2710760 2710755
[2025-06-03 16:45:35] 2025-06-03 23:45:34,648 [wrapper] Test setup, not cleaning
[2025-06-03 16:45:35] 2025-06-03 23:45:34,662 [wrapper] apfmon messages muted
[2025-06-03 16:45:35] 2025-06-03 23:45:34,675 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:45:35] 2025-06-03 23:45:34,677 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:45:35]  *** Error codes and diagnostics ***
[2025-06-03 16:45:35]     "exeErrorCode": 65,
[2025-06-03 16:45:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 16:45:35]     "pilotErrorCode": 1305,
[2025-06-03 16:45:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 16:45:35]  *** Listing of results directory ***
[2025-06-03 16:45:35] total 213624
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc    549845 Jun  2 02:40 pilot3.tar.gz
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:46 queuedata.json
[2025-06-03 16:45:35] -rwx------. 1 boinc boinc     37140 Jun  3 14:46 runpilot2-wrapper.sh
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:45:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:40 run_atlas
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:40 job.xml
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc      6602 Jun  3 16:40 init_data.xml
[2025-06-03 16:45:35] -rw-r--r--. 2 boinc boinc 214603888 Jun  3 16:40 EVNT.45006593._001854.pool.root.1
[2025-06-03 16:45:35] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:40 start_atlas.sh
[2025-06-03 16:45:35] drwxrwx--x. 2 boinc boinc      4096 Jun  3 16:40 shared
[2025-06-03 16:45:35] -rw-r--r--. 2 boinc boinc    564112 Jun  3 16:40 input.tar.gz
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:40 boinc_lockfile
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc      2525 Jun  3 16:40 pandaJob.out
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc    986077 Jun  3 16:41 agis_schedconf.cvmfs.json
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc   1603667 Jun  3 16:41 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:45:35] drwx------. 6 boinc boinc      4096 Jun  3 16:41 pilot3
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc       524 Jun  3 16:42 boinc_task_state.xml
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc       959 Jun  3 16:42 memory_monitor_summary.json
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc     21303 Jun  3 16:42 log.45006595._046214.job.log.tgz.1
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc      8367 Jun  3 16:45 heartbeat.json
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc        22 Jun  3 16:45 wrapper_checkpoint.txt
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc       893 Jun  3 16:45 pilotlog.txt
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc        95 Jun  3 16:45 pilot_heartbeat.json
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc     83917 Jun  3 16:45 log.45006595._046214.job.log.1
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc       188 Jun  3 16:45 output.list
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc       620 Jun  3 16:45 runtime_log
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc    122880 Jun  3 16:45 result.tar.gz
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc      8484 Jun  3 16:45 runtime_log.err
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc       644 Jun  3 16:45 fX7NDm8dog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmX1ZKDm4mTxLm.diag
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc      8192 Jun  3 16:45 boinc_mmap_file
[2025-06-03 16:45:35] -rw-r--r--. 1 boinc boinc     21799 Jun  3 16:45 stderr.txt
[2025-06-03 16:45:35] No HITS result produced
[2025-06-03 16:45:35]  *** Contents of shared directory: ***
[2025-06-03 16:45:35] total 210268
[2025-06-03 16:45:35] -rw-r--r--. 2 boinc boinc 214603888 Jun  3 16:40 ATLAS.root_0
[2025-06-03 16:45:35] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:40 start_atlas.sh
[2025-06-03 16:45:35] -rw-r--r--. 2 boinc boinc    564112 Jun  3 16:40 input.tar.gz
[2025-06-03 16:45:35] -rw-------. 1 boinc boinc    122880 Jun  3 16:45 result.tar.gz
16:45:36 (2707171): run_atlas exited; CPU time 23.992666
16:45:36 (2707171): called boinc_finish(0)

</stderr_txt>
]]>

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