Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:38:00 (16002): wrapper (7.7.26015): starting
19:38:00 (16002): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 19:38:00] Arguments: --nthreads 12
[2025-06-03 19:38:00] Threads: 12
[2025-06-03 19:38:00] Checking for CVMFS
[2025-06-03 19:38:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 19:38:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 19:38:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 19:38:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 19:38:00] 2.11.2.0 3081 34864 86984 146761 1 56 17640239 20275201 1 130560 0 14866305 99.982 6120664 7353 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 19:38:00] CVMFS is ok
[2025-06-03 19:38:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:38:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:38:00] Further information can be found at the LHC@home message board.
[2025-06-03 19:38:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:38:00] Checking for apptainer binary...
[2025-06-03 19:38:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 19:38:00] Running /usr/bin/apptainer --version
[2025-06-03 19:38:00] apptainer version 1.3.2-1.el7
[2025-06-03 19:38:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:38:02] c-205-29.aglt2.org
[2025-06-03 19:38:02] apptainer works
[2025-06-03 19:38:02] Set ATHENA_PROC_NUMBER=12
[2025-06-03 19:38:02] Set ATHENA_CORE_NUMBER=12
[2025-06-03 19:38:02] Starting ATLAS job with PandaID=6677978531
[2025-06-03 19:38:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:40:51]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:40:51]  filetype=log
[2025-06-03 20:40:51]  guid=8f8d7d69-bcdb-4876-8b14-f571d603bc5c
[2025-06-03 20:40:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 20:40:51]  is_altstaged=None
[2025-06-03 20:40:51]  is_tar=False
[2025-06-03 20:40:51]  lfn=log.45006595._043972.job.log.tgz.1
[2025-06-03 20:40:51]  mtime=0
[2025-06-03 20:40:51]  protocol_id=None
[2025-06-03 20:40:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 20:40:51]  replicas=None
[2025-06-03 20:40:51]  scope=mc23_13p6TeV
[2025-06-03 20:40:51]  status=None
[2025-06-03 20:40:51]  status_code=0
[2025-06-03 20:40:51]  storage_token=
[2025-06-03 20:40:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677978531/log.45006595._043972.job.log.tgz.1
[2025-06-03 20:40:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/78/log.45006595._043972.job.log.tgz.1
[2025-06-03 20:40:51]  workdir=None
[2025-06-03 20:40:51] ]
[2025-06-03 20:40:51] 2025-06-04 00:40:27,054 | INFO     | transferring file log.45006595._043972.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677978531/log.45006595._043972.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 20:40:51] 2025-06-04 00:40:27,054 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677978531/log.45006595._043972.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._043972.job
[2025-06-03 20:40:51] 2025-06-04 00:40:27,077 | INFO     | adding to output.list: log.45006595._043972.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/78/log.45006595._043972.job.log.tg
[2025-06-03 20:40:51] 2025-06-04 00:40:27,078 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 20:40:51] 2025-06-04 00:40:27,078 | INFO     | summary of transferred files:
[2025-06-03 20:40:51] 2025-06-04 00:40:27,078 | INFO     |  -- lfn=log.45006595._043972.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 20:40:51] 2025-06-04 00:40:27,078 | INFO     | stage-out finished correctly
[2025-06-03 20:40:51] 2025-06-04 00:40:27,249 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 20:40:51] 2025-06-04 00:40:28,041 | INFO     | job 6677978531 has state=finished
[2025-06-03 20:40:51] 2025-06-04 00:40:28,041 | INFO     | preparing for final server update for job 6677978531 in state='finished'
[2025-06-03 20:40:51] 2025-06-04 00:40:28,045 | INFO     | this job has now completed (state=finished)
[2025-06-03 20:40:51] 2025-06-04 00:40:28,046 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 20:40:51] 2025-06-04 00:40:28,046 | INFO     | log transfer has been attempted: DONE
[2025-06-03 20:40:51] 2025-06-04 00:40:28,046 | INFO     | job 6677978531 has finished - writing final server update
[2025-06-03 20:40:51] 2025-06-04 00:40:28,046 | INFO     | total number of processed events: 400 (read)
[2025-06-03 20:40:51] 2025-06-04 00:40:28,047 | INFO     | executing command: lscpu
[2025-06-03 20:40:51] 2025-06-04 00:40:28,074 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 20:40:51] 2025-06-04 00:40:28,137 | INFO     | monitor loop #282: job 0:6677978531 is in state 'finished'
[2025-06-03 20:40:51] 2025-06-04 00:40:28,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:40:51] 2025-06-04 00:40:30,641 | INFO     | monitor loop #283: job 0:6677978531 is in state 'finished'
[2025-06-03 20:40:51] 2025-06-04 00:40:30,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:40:51] 2025-06-04 00:40:32,677 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 20:40:51] 2025-06-04 00:40:32,677 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677978531/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:40:51] 2025-06-04 00:40:32,678 | INFO     | extracted standard info from prmon json
[2025-06-03 20:40:51] 2025-06-04 00:40:32,679 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:40:51] 2025-06-04 00:40:32,679 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:40:51] 2025-06-04 00:40:32,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:40:51] 2025-06-04 00:40:32,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:40:51] 2025-06-04 00:40:32,681 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:40:51] 2025-06-04 00:40:32,682 | INFO     | sum of square deviations: 48810217.5
[2025-06-03 20:40:51] 2025-06-04 00:40:32,682 | INFO     | sum of deviations: -5214851204.0
[2025-06-03 20:40:51] 2025-06-04 00:40:32,682 | INFO     | mean x: 1748995847.5
[2025-06-03 20:40:51] 2025-06-04 00:40:32,683 | INFO     | mean y: 2846156.5555555555
[2025-06-03 20:40:51] 2025-06-04 00:40:32,683 | INFO     | -- intersect: 186864400320.4225
[2025-06-03 20:40:51] 2025-06-04 00:40:32,683 | INFO     | intersect: 186864400320.4225
[2025-06-03 20:40:51] 2025-06-04 00:40:32,683 | INFO     | chi2: 0.0539810495502373
[2025-06-03 20:40:51] 2025-06-04 00:40:32,683 | INFO     | -- intersect: 186864400320.4225
[2025-06-03 20:40:51] 2025-06-04 00:40:32,684 | INFO     | current memory leak: -106.84 B/s (using 54 data points, chi2=0.05)
[2025-06-03 20:40:51] 2025-06-04 00:40:32,684 | INFO     | ..............................
[2025-06-03 20:40:51] 2025-06-04 00:40:32,684 | INFO     | . Timing measurements:
[2025-06-03 20:40:51] 2025-06-04 00:40:32,684 | INFO     | . get job = 0 s
[2025-06-03 20:40:51] 2025-06-04 00:40:32,684 | INFO     | . initial setup = 2 s
[2025-06-03 20:40:51] 2025-06-04 00:40:32,685 | INFO     | . payload setup = 9 s
[2025-06-03 20:40:51] 2025-06-04 00:40:32,685 | INFO     | . stage-in = 0 s
[2025-06-03 20:40:51] 2025-06-04 00:40:32,685 | INFO     | . payload execution = 3701 s
[2025-06-03 20:40:51] 2025-06-04 00:40:32,685 | INFO     | . stage-out = 0 s
[2025-06-03 20:40:51] 2025-06-04 00:40:32,685 | INFO     | . log creation = 0 s
[2025-06-03 20:40:51] 2025-06-04 00:40:32,685 | INFO     | ..............................
[2025-06-03 20:40:51] 2025-06-04 00:40:32,770 | INFO     | 
[2025-06-03 20:40:51] 2025-06-04 00:40:32,770 | INFO     | job summary report
[2025-06-03 20:40:51] 2025-06-04 00:40:32,770 | INFO     | --------------------------------------------------
[2025-06-03 20:40:51] 2025-06-04 00:40:32,770 | INFO     | PanDA job id: 6677978531
[2025-06-03 20:40:51] 2025-06-04 00:40:32,770 | INFO     | task id: 45006595
[2025-06-03 20:40:51] 2025-06-04 00:40:32,771 | INFO     | errors: (none)
[2025-06-03 20:40:51] 2025-06-04 00:40:32,771 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:40:51] 2025-06-04 00:40:32,771 | INFO     | pilot state: finished 
[2025-06-03 20:40:51] 2025-06-04 00:40:32,771 | INFO     | transexitcode: 0
[2025-06-03 20:40:51] 2025-06-04 00:40:32,771 | INFO     | exeerrorcode: 0
[2025-06-03 20:40:51] 2025-06-04 00:40:32,771 | INFO     | exeerrordiag: 
[2025-06-03 20:40:51] 2025-06-04 00:40:32,772 | INFO     | exitcode: 0
[2025-06-03 20:40:51] 2025-06-04 00:40:32,772 | INFO     | exitmsg: OK
[2025-06-03 20:40:51] 2025-06-04 00:40:32,772 | INFO     | cpuconsumptiontime: 40011 s
[2025-06-03 20:40:51] 2025-06-04 00:40:32,772 | INFO     | nevents: 400
[2025-06-03 20:40:51] 2025-06-04 00:40:32,772 | INFO     | neventsw: 0
[2025-06-03 20:40:51] 2025-06-04 00:40:32,772 | INFO     | pid: 26168
[2025-06-03 20:40:51] 2025-06-04 00:40:32,773 | INFO     | pgrp: 26168
[2025-06-03 20:40:51] 2025-06-04 00:40:32,773 | INFO     | corecount: 12
[2025-06-03 20:40:51] 2025-06-04 00:40:32,773 | INFO     | event service: False
[2025-06-03 20:40:51] 2025-06-04 00:40:32,773 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 3714: 2431071, 3715: 2431070, 3716: 2440251, 3721: 2440365}
[2025-06-03 20:40:51] 2025-06-04 00:40:32,773 | INFO     | --------------------------------------------------
[2025-06-03 20:40:51] 2025-06-04 00:40:32,773 | INFO     | 
[2025-06-03 20:40:51] 2025-06-04 00:40:32,773 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 20:40:51] 2025-06-04 00:40:32,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,795 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,795 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,796 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:40:51] 2025-06-04 00:40:32,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:40:51] 2025-06-04 00:40:32,798 | INFO     | job 6677978531 has completed (purged errors)
[2025-06-03 20:40:51] 2025-06-04 00:40:32,799 | INFO     | overall cleanup function is called
[2025-06-03 20:40:51] 2025-06-04 00:40:33,807 | INFO     | --- collectZombieJob: --- 10, [26168]
[2025-06-03 20:40:51] 2025-06-04 00:40:33,807 | INFO     | zombie collector waiting for pid 26168
[2025-06-03 20:40:51] 2025-06-04 00:40:33,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:40:51] 2025-06-04 00:40:33,807 | INFO     | collected zombie processes
[2025-06-03 20:40:51] 2025-06-04 00:40:33,808 | INFO     | will attempt to kill all subprocesses of pid=26168
[2025-06-03 20:40:51] 2025-06-04 00:40:33,898 | INFO     | process IDs to be killed: [26168] (in reverse order)
[2025-06-03 20:40:51] 2025-06-04 00:40:33,949 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:40:51] 2025-06-04 00:40:33,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:40:51] 2025-06-04 00:40:33,952 | INFO     | did not find any defunct processes belonging to 26168
[2025-06-03 20:40:51] 2025-06-04 00:40:33,955 | INFO     | did not find any defunct processes belonging to 26168
[2025-06-03 20:40:51] 2025-06-04 00:40:33,955 | INFO     | ready for new job
[2025-06-03 20:40:51] 2025-06-04 00:40:33,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:40:51] 2025-06-04 00:40:33,956 | INFO     | **************************************
[2025-06-03 20:40:51] 2025-06-04 00:40:33,956 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:40:51] 2025-06-04 00:40:33,956 | INFO     | **************************************
[2025-06-03 20:40:51] 2025-06-04 00:40:33,956 | INFO     | 
[2025-06-03 20:40:51] 2025-06-04 00:40:33,957 | INFO     | architecture information:
[2025-06-03 20:40:51] 2025-06-04 00:40:33,957 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:40:51] 2025-06-04 00:40:33,972 | INFO     | cat /etc/os-release:
[2025-06-03 20:40:51] NAME="CentOS Linux"
[2025-06-03 20:40:51] VERSION="7 (Core)"
[2025-06-03 20:40:51] ID="centos"
[2025-06-03 20:40:51] ID_LIKE="rhel fedora"
[2025-06-03 20:40:51] VERSION_ID="7"
[2025-06-03 20:40:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:40:51] ANSI_COLOR="0;31"
[2025-06-03 20:40:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:40:51] HOME_URL="https://www.centos.org/"
[2025-06-03 20:40:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:40:51] 
[2025-06-03 20:40:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:40:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:40:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:40:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:40:51] 
[2025-06-03 20:40:51] 2025-06-04 00:40:33,972 | INFO     | **************************************
[2025-06-03 20:40:51] 2025-06-04 00:40:34,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 20:40:51] 2025-06-04 00:40:34,491 | INFO     | sufficient remaining disk space (29414653952 B)
[2025-06-03 20:40:51] 2025-06-04 00:40:34,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:40:51] 2025-06-04 00:40:34,492 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:40:51] 2025-06-04 00:40:34,492 | INFO     | update_server=False
[2025-06-03 20:40:51] 2025-06-04 00:40:34,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:40:51] 2025-06-04 00:40:34,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:40:51] 2025-06-04 00:40:34,493 | INFO     | aborting loop
[2025-06-03 20:40:51] 2025-06-04 00:40:34,493 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 20:40:51] 2025-06-04 00:40:34,493 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:40:51] 2025-06-04 00:40:34,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:40:51] 2025-06-04 00:40:34,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:40:51] 2025-06-04 00:40:34,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:40:51] 2025-06-04 00:40:34,536 | INFO     | all payload control threads have been joined
[2025-06-03 20:40:51] 2025-06-04 00:40:34,652 | INFO     | all job control threads have been joined
[2025-06-03 20:40:51] 2025-06-04 00:40:34,733 | INFO     | all data control threads have been joined
[2025-06-03 20:40:51] 2025-06-04 00:40:35,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:40:51] 2025-06-04 00:40:35,498 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:35,499 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:35,500 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:35,542 | INFO     | [payload] control thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:35,658 | INFO     | [job] control thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:35,699 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:35,721 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:35,722 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:35,738 | INFO     | [data] control thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:36,244 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:36,411 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:36,712 | INFO     | [job] validate thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:36,972 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:37,179 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:37,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:40:51] 2025-06-04 00:40:41,845 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:45,133 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:40:51] 2025-06-04 00:40:46,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:40:51] 2025-06-04 00:40:46,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337668581184)>', '<ExcThread(monitor, started 140337200731904)>']
[2025-06-03 20:40:51] 2025-06-04 00:40:47,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:40:51] 2025-06-04 00:40:47,559 | INFO     | [monitor] control thread has ended
[2025-06-03 20:40:51] 2025-06-04 00:40:51,612 | INFO     | all workflow threads have been joined
[2025-06-03 20:40:51] 2025-06-04 00:40:51,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:40:51] 2025-06-04 00:40:51,612 | INFO     | traces error code: 0
[2025-06-03 20:40:51] 2025-06-04 00:40:51,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:40:51] 2025-06-04 00:40:51,689 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:40:51] 2025-06-04 00:40:51,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:40:51] 2025-06-04 00:40:51,696 [wrapper] pilotpid: 19638
[2025-06-03 20:40:51] 2025-06-04 00:40:51,700 [wrapper] Pilot exit status: 0
[2025-06-03 20:40:51] 2025-06-04 00:40:51,716 [wrapper] pandaids: 6677978531
[2025-06-03 20:40:51] 2025-06-04 00:40:51,756 [wrapper] cleanup supervisor_pilot 31163 19639
[2025-06-03 20:40:51] 2025-06-04 00:40:51,759 [wrapper] Test setup, not cleaning
[2025-06-03 20:40:51] 2025-06-04 00:40:51,763 [wrapper] apfmon messages muted
[2025-06-03 20:40:51] 2025-06-04 00:40:51,767 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:40:51] 2025-06-04 00:40:51,772 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:40:51]  *** Error codes and diagnostics ***
[2025-06-03 20:40:51]     "exeErrorCode": 0,
[2025-06-03 20:40:51]     "exeErrorDiag": "",
[2025-06-03 20:40:51]     "pilotErrorCode": 0,
[2025-06-03 20:40:51]     "pilotErrorDiag": "",
[2025-06-03 20:40:51]  *** Listing of results directory ***
[2025-06-03 20:40:51] total 391232
[2025-06-03 20:40:51] -rwx------ 1 boincer umatlas     37140 Jun  3 15:41 runpilot2-wrapper.sh
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 15:41 queuedata.json
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 15:41 pilot3.tar.gz
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas       100 Jun  3 19:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:40:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 19:37 run_atlas
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas       105 Jun  3 19:37 job.xml
[2025-06-03 20:40:51] -rw-r--r-- 2 boincer umatlas 218465738 Jun  3 19:38 EVNT.45006593._001762.pool.root.1
[2025-06-03 20:40:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 19:38 start_atlas.sh
[2025-06-03 20:40:51] drwxrwx--x 2 boincer umatlas      4096 Jun  3 19:38 shared
[2025-06-03 20:40:51] -rw-r--r-- 2 boincer umatlas    508868 Jun  3 19:38 input.tar.gz
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas         0 Jun  3 19:38 boinc_lockfile
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 19:38 pandaJob.out
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas    986077 Jun  3 19:38 agis_schedconf.cvmfs.json
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas   1603667 Jun  3 19:38 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:40:51] drwx------ 4 boincer umatlas      4096 Jun  3 19:38 pilot3
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas      5868 Jun  3 20:39 init_data.xml
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas       529 Jun  3 20:39 boinc_task_state.xml
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas 176836973 Jun  3 20:39 HITS.45006595._043972.pool.root.1
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas        95 Jun  3 20:40 pilot_heartbeat.json
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas      1048 Jun  3 20:40 memory_monitor_summary.json
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas    372071 Jun  3 20:40 log.45006595._043972.job.log.tgz.1
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas      7752 Jun  3 20:40 heartbeat.json
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 20:40 boinc_mmap_file
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas        27 Jun  3 20:40 wrapper_checkpoint.txt
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas      4548 Jun  3 20:40 pilotlog.txt
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas    369399 Jun  3 20:40 log.45006595._043972.job.log.1
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas       357 Jun  3 20:40 output.list
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas       620 Jun  3 20:40 runtime_log
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas    757760 Jun  3 20:40 result.tar.gz
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 20:40 runtime_log.err
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas       659 Jun  3 20:40 BkUMDmRhmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUmZKDmgkYnvm.diag
[2025-06-03 20:40:51] -rw-r--r-- 1 boincer umatlas     21183 Jun  3 20:40 stderr.txt
[2025-06-03 20:40:51] HITS file was successfully produced:
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas 176836973 Jun  3 20:39 shared/HITS.pool.root.1
[2025-06-03 20:40:51]  *** Contents of shared directory: ***
[2025-06-03 20:40:51] total 387308
[2025-06-03 20:40:51] -rw-r--r-- 2 boincer umatlas 218465738 Jun  3 19:38 ATLAS.root_0
[2025-06-03 20:40:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 19:38 start_atlas.sh
[2025-06-03 20:40:51] -rw-r--r-- 2 boincer umatlas    508868 Jun  3 19:38 input.tar.gz
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas 176836973 Jun  3 20:39 HITS.pool.root.1
[2025-06-03 20:40:51] -rw------- 1 boincer umatlas    757760 Jun  3 20:40 result.tar.gz
20:40:53 (16002): run_atlas exited; CPU time 39986.726580
20:40:53 (16002): called boinc_finish(0)

</stderr_txt>
]]>

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