Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:42:03 (3640858): wrapper (7.7.26015): starting
16:42:03 (3640858): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 16:42:03] Arguments: --nthreads 12
[2025-06-03 16:42:03] Threads: 12
[2025-06-03 16:42:03] Checking for CVMFS
[2025-06-03 16:42:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:42:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:42:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:42:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:42:06] 2.11.5.0 1901393 32299 251432 146761 3 462 38473438 45568001 13285 130560 0 272434552 99.813 159053861 25719 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 16:42:06] CVMFS is ok
[2025-06-03 16:42:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:42:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:42:06] Further information can be found at the LHC@home message board.
[2025-06-03 16:42:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:42:06] Checking for apptainer binary...
[2025-06-03 16:42:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:42:06] Running /usr/bin/apptainer --version
[2025-06-03 16:42:06] apptainer version 1.4.0-1.el9
[2025-06-03 16:42:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:42:07] wns0102.triumf.lcg
[2025-06-03 16:42:07] apptainer works
[2025-06-03 16:42:07] Set ATHENA_PROC_NUMBER=12
[2025-06-03 16:42:07] Set ATHENA_CORE_NUMBER=12
[2025-06-03 16:42:07] Starting ATLAS job with PandaID=6678074811
[2025-06-03 16:42:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:48:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:48:01] 2025-06-03 23:47:43,632 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:48:01] 2025-06-03 23:47:43,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:48:01] 2025-06-03 23:47:43,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:48:01] 2025-06-03 23:47:43,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | WARNING  | wrong length of table data, x=[1748994263.0], y=[1347.0] (must be same and length>=4)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | ..............................
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . Timing measurements:
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . get job = 0 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . initial setup = 5 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . payload setup = 18 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . stage-in = 0 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . payload execution = 62 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | . stage-out = 2 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | . log creation = 0 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | ..............................
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678074811/pilotlog.txt
[2025-06-03 16:48:01] 2025-06-03 23:47:43,649 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 16:48:01] - Log from pilotlog.txt -
[2025-06-03 16:48:01] 2025-06-03 23:47:43,631 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 16:48:01] 2025-06-03 23:47:43,632 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678074811/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,632 | INFO     | extracted standard info from prmon json
[2025-06-03 16:48:01] 2025-06-03 23:47:43,632 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:48:01] 2025-06-03 23:47:43,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:48:01] 2025-06-03 23:47:43,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:48:01] 2025-06-03 23:47:43,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | WARNING  | wrong length of table data, x=[1748994263.0], y=[1347.0] (must be same and length>=4)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | ..............................
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . Timing measurements:
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . get job = 0 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . initial setup = 5 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . payload setup = 18 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . stage-in = 0 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . payload execution = 62 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | . stage-out = 2 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | . log creation = 0 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | ..............................
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678074811/pilotlog.txt
[2025-06-03 16:48:01] 2025-06-03 23:47:43,649 | WARNING  | 
[2025-06-03 16:48:01] [begin log extracts]
[2025-06-03 16:48:01] - Log from pilotlog.txt -
[2025-06-03 16:48:01] 2025-06-03 23:47:43,631 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 16:48:01] 2025-06-03 23:47:43,632 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678074811/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,632 | INFO     | extracted standard info from prmon json
[2025-06-03 16:48:01] 2025-06-03 23:47:43,632 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:48:01] 2025-06-03 23:47:43,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:48:01] 2025-06-03 23:47:43,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:48:01] 2025-06-03 23:47:43,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | WARNING  | wrong length of table data, x=[1748994263.0], y=[1347.0] (must be same and length>=4)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | ..............................
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . Timing measurements:
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . get job = 0 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . initial setup = 5 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . payload setup = 18 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . stage-in = 0 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,634 | INFO     | . payload execution = 62 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | . stage-out = 2 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | . log creation = 0 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | ..............................
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 16:48:01] 2025-06-03 23:47:43,635 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678074811/pilotlog.txt
[2025-06-03 16:48:01] [end log extracts]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,649 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,650 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | 
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | job summary report
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | --------------------------------------------------
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | PanDA job id: 6678074811
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | task id: 45006595
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 16:44:55,557 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | pilot state: failed 
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | transexitcode: 65
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | exeerrorcode: 65
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | exitcode: 65
[2025-06-03 16:48:01] 2025-06-03 23:47:43,751 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | cpuconsumptiontime: 20 s
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | nevents: 0
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | neventsw: 0
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | pid: 3655750
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | pgrp: 3655750
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | corecount: 12
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | event service: False
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | sizes: {0: 2404356, 1: 2404954, 2: 2405237, 3: 2405237, 14: 2405265, 24: 2405499, 25: 2405655, 85: 2429008, 88: 2433243, 90: 2433271, 241: 2433413}
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | --------------------------------------------------
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | 
[2025-06-03 16:48:01] 2025-06-03 23:47:43,752 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 16:48:01] 2025-06-03 23:47:43,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,781 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,781 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | job 6678074811 has completed (purged errors)
[2025-06-03 16:48:01] 2025-06-03 23:47:43,782 | INFO     | overall cleanup function is called
[2025-06-03 16:48:01] 2025-06-03 23:47:44,789 | INFO     | --- collectZombieJob: --- 10, [3655750]
[2025-06-03 16:48:01] 2025-06-03 23:47:44,789 | INFO     | zombie collector waiting for pid 3655750
[2025-06-03 16:48:01] 2025-06-03 23:47:44,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:48:01] 2025-06-03 23:47:44,789 | INFO     | collected zombie processes
[2025-06-03 16:48:01] 2025-06-03 23:47:44,789 | INFO     | will attempt to kill all subprocesses of pid=3655750
[2025-06-03 16:48:01] 2025-06-03 23:47:45,834 | INFO     | process IDs to be killed: [3655750] (in reverse order)
[2025-06-03 16:48:01] 2025-06-03 23:47:46,216 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:48:01] 2025-06-03 23:47:46,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:48:01] 2025-06-03 23:47:46,266 | INFO     | did not find any defunct processes belonging to 3655750
[2025-06-03 16:48:01] 2025-06-03 23:47:46,294 | INFO     | did not find any defunct processes belonging to 3655750
[2025-06-03 16:48:01] 2025-06-03 23:47:46,294 | INFO     | ready for new job
[2025-06-03 16:48:01] 2025-06-03 23:47:46,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:48:01] 2025-06-03 23:47:46,312 | INFO     | **************************************
[2025-06-03 16:48:01] 2025-06-03 23:47:46,313 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:48:01] 2025-06-03 23:47:46,313 | INFO     | **************************************
[2025-06-03 16:48:01] 2025-06-03 23:47:46,313 | INFO     | 
[2025-06-03 16:48:01] 2025-06-03 23:47:46,315 | INFO     | architecture information:
[2025-06-03 16:48:01] 2025-06-03 23:47:46,336 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:48:01] 2025-06-03 23:47:46,391 | INFO     | cat /etc/os-release:
[2025-06-03 16:48:01] NAME="CentOS Linux"
[2025-06-03 16:48:01] VERSION="7 (Core)"
[2025-06-03 16:48:01] ID="centos"
[2025-06-03 16:48:01] ID_LIKE="rhel fedora"
[2025-06-03 16:48:01] VERSION_ID="7"
[2025-06-03 16:48:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:48:01] ANSI_COLOR="0;31"
[2025-06-03 16:48:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:48:01] HOME_URL="https://www.centos.org/"
[2025-06-03 16:48:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:48:01] 
[2025-06-03 16:48:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:48:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:48:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:48:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:48:01] 
[2025-06-03 16:48:01] 2025-06-03 23:47:46,392 | INFO     | **************************************
[2025-06-03 16:48:01] 2025-06-03 23:47:46,895 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 16:48:01] 2025-06-03 23:47:46,983 | INFO     | sufficient remaining disk space (2049837105152 B)
[2025-06-03 16:48:01] 2025-06-03 23:47:46,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:48:01] 2025-06-03 23:47:46,984 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:48:01] 2025-06-03 23:47:46,984 | INFO     | update_server=False
[2025-06-03 16:48:01] 2025-06-03 23:47:46,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:48:01] 2025-06-03 23:47:46,985 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:48:01] 2025-06-03 23:47:46,985 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:48:01] 2025-06-03 23:47:46,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:48:01] 2025-06-03 23:47:46,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:48:01] 2025-06-03 23:47:47,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:48:01] 2025-06-03 23:47:47,226 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 16:48:01] 2025-06-03 23:47:47,226 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 16:48:01] 2025-06-03 23:47:47,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:48:01] 2025-06-03 23:47:47,226 | INFO     | will abort loop
[2025-06-03 16:48:01] 2025-06-03 23:47:47,509 | INFO     | all payload control threads have been joined
[2025-06-03 16:48:01] 2025-06-03 23:47:47,827 | INFO     | all data control threads have been joined
[2025-06-03 16:48:01] 2025-06-03 23:47:47,990 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:48,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:48:01] 2025-06-03 23:47:48,232 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:48,376 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:48,440 | INFO     | all job control threads have been joined
[2025-06-03 16:48:01] 2025-06-03 23:47:48,476 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:48,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:48,515 | INFO     | [payload] control thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:48,530 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:48,654 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:48,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:48:01] 2025-06-03 23:47:48,833 | INFO     | [data] control thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:48,875 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:49,192 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:49,446 | INFO     | [job] control thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:49,462 | INFO     | [job] validate thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:49,541 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:49,771 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:52,126 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:48:01] 2025-06-03 23:47:54,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027987760960)>', '<ExcThread(monitor, started 140027426215680)>']
[2025-06-03 16:48:01] 2025-06-03 23:47:55,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:48:01] 2025-06-03 23:47:55,032 | INFO     | [monitor] control thread has ended
[2025-06-03 16:48:01] 2025-06-03 23:47:59,194 | INFO     | all workflow threads have been joined
[2025-06-03 16:48:01] 2025-06-03 23:47:59,194 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:48:01] 2025-06-03 23:47:59,195 | INFO     | traces error code: 0
[2025-06-03 16:48:01] 2025-06-03 23:47:59,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:48:01] 2025-06-03 23:47:59,710 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:48:01] 2025-06-03 23:47:59,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:48:01] 2025-06-03 23:47:59,799 [wrapper] pilotpid: 3645612
[2025-06-03 16:48:01] 2025-06-03 23:47:59,810 [wrapper] Pilot exit status: 0
[2025-06-03 16:48:01] 2025-06-03 23:47:59,907 [wrapper] pandaids: 6678074811
[2025-06-03 16:48:01] 2025-06-03 23:48:00,343 [wrapper] cleanup supervisor_pilot 3645618 3645613
[2025-06-03 16:48:01] 2025-06-03 23:48:00,383 [wrapper] Test setup, not cleaning
[2025-06-03 16:48:01] 2025-06-03 23:48:00,415 [wrapper] apfmon messages muted
[2025-06-03 16:48:01] 2025-06-03 23:48:00,451 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:48:01] 2025-06-03 23:48:00,472 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:48:01]  *** Error codes and diagnostics ***
[2025-06-03 16:48:01]     "exeErrorCode": 65,
[2025-06-03 16:48:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 16:48:01]     "pilotErrorCode": 1305,
[2025-06-03 16:48:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 16:48:01]  *** Listing of results directory ***
[2025-06-03 16:48:01] total 215856
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:41 pilot3.tar.gz
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:43 queuedata.json
[2025-06-03 16:48:01] -rwx------. 1 boinc boinc     37140 Jun  3 14:43 runpilot2-wrapper.sh
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:48:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:42 run_atlas
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:42 job.xml
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc      6596 Jun  3 16:42 init_data.xml
[2025-06-03 16:48:01] -rw-r--r--. 2 boinc boinc 216994038 Jun  3 16:42 EVNT.45006593._001849.pool.root.1
[2025-06-03 16:48:01] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:42 start_atlas.sh
[2025-06-03 16:48:01] drwxrwx--x. 2 boinc boinc      4096 Jun  3 16:42 shared
[2025-06-03 16:48:01] -rw-r--r--. 2 boinc boinc    508876 Jun  3 16:42 input.tar.gz
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:42 boinc_lockfile
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc      2525 Jun  3 16:42 pandaJob.out
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc    986077 Jun  3 16:42 agis_schedconf.cvmfs.json
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc   1603667 Jun  3 16:42 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:48:01] drwx------. 4 boinc boinc      4096 Jun  3 16:42 pilot3
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc       525 Jun  3 16:44 boinc_task_state.xml
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc       954 Jun  3 16:45 memory_monitor_summary.json
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc     21298 Jun  3 16:45 log.45006595._046098.job.log.tgz.1
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc        95 Jun  3 16:46 pilot_heartbeat.json
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc      8331 Jun  3 16:47 heartbeat.json
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc      8192 Jun  3 16:47 boinc_mmap_file
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc        23 Jun  3 16:47 wrapper_checkpoint.txt
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc      4661 Jun  3 16:47 pilotlog.txt
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc     82361 Jun  3 16:48 log.45006595._046098.job.log.1
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc       188 Jun  3 16:48 output.list
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc       620 Jun  3 16:48 runtime_log
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc    122880 Jun  3 16:48 result.tar.gz
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc       645 Jun  3 16:48 vVzMDmMbog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjGmKDmbfRr6n.diag
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc      8484 Jun  3 16:48 runtime_log.err
[2025-06-03 16:48:01] -rw-r--r--. 1 boinc boinc     21700 Jun  3 16:48 stderr.txt
[2025-06-03 16:48:01] No HITS result produced
[2025-06-03 16:48:01]  *** Contents of shared directory: ***
[2025-06-03 16:48:01] total 212548
[2025-06-03 16:48:01] -rw-r--r--. 2 boinc boinc 216994038 Jun  3 16:42 ATLAS.root_0
[2025-06-03 16:48:01] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:42 start_atlas.sh
[2025-06-03 16:48:01] -rw-r--r--. 2 boinc boinc    508876 Jun  3 16:42 input.tar.gz
[2025-06-03 16:48:01] -rw-------. 1 boinc boinc    122880 Jun  3 16:48 result.tar.gz
16:48:02 (3640858): run_atlas exited; CPU time 32.766780
16:48:02 (3640858): called boinc_finish(0)

</stderr_txt>
]]>

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