Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:20 (30379): wrapper (7.7.26015): starting
09:35:20 (30379): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:35:20] Arguments: --nthreads 8
[2025-06-04 09:35:20] Threads: 8
[2025-06-04 09:35:20] Checking for CVMFS
[2025-06-04 09:35:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:35:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:35:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:35:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:35:21] 2.11.2.0 19526 33154 107816 146772 1 158 18781757 25165825 2777 130560 0 17651740 99.819 18926448 2136 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 09:35:21] CVMFS is ok
[2025-06-04 09:35:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:35:21] Checking for apptainer binary...
[2025-06-04 09:35:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:35:21] Running /usr/bin/apptainer --version
[2025-06-04 09:35:21] apptainer version 1.3.2-1.el7
[2025-06-04 09:35:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:35:23] cg-vwn225.simple-grid.lan
[2025-06-04 09:35:23] apptainer works
[2025-06-04 09:35:23] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:35:23] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:35:23] Starting ATLAS job with PandaID=6678014540
[2025-06-04 09:35:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:02:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:02:31] 2025-06-04 11:13:40,165 | INFO     | monitor loop #943: job 0:6678014540 is in state 'finished'
[2025-06-04 20:02:31] 2025-06-04 11:13:40,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:02:31] 2025-06-04 11:13:42,670 | INFO     | monitor loop #944: job 0:6678014540 is in state 'finished'
[2025-06-04 20:02:31] 2025-06-04 11:13:42,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:02:31] 2025-06-04 11:13:45,174 | INFO     | monitor loop #945: job 0:6678014540 is in state 'finished'
[2025-06-04 20:02:31] 2025-06-04 11:13:45,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:02:31] 2025-06-04 11:13:46,767 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 20:02:31] 2025-06-04 11:13:46,768 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6678014540/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:02:31] 2025-06-04 11:13:46,768 | INFO     | extracted standard info from prmon json
[2025-06-04 20:02:31] 2025-06-04 11:13:46,769 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:02:31] 2025-06-04 11:13:46,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:02:31] 2025-06-04 11:13:46,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:02:31] 2025-06-04 11:13:46,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:02:31] 2025-06-04 11:13:46,774 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:02:31] 2025-06-04 11:13:46,775 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,777 | INFO     | sum of deviations: -10298323292.000013
[2025-06-04 20:02:31] 2025-06-04 11:13:46,777 | INFO     | mean x: 1749029152.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,777 | INFO     | mean y: 2478540.6842105263
[2025-06-04 20:02:31] 2025-06-04 11:13:46,777 | INFO     | -- intersect: 6365395123.962541
[2025-06-04 20:02:31] 2025-06-04 11:13:46,777 | INFO     | intersect: 6365395123.962541
[2025-06-04 20:02:31] 2025-06-04 11:13:46,777 | INFO     | chi2: 3.387060152710162
[2025-06-04 20:02:31] 2025-06-04 11:13:46,778 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,780 | INFO     | sum of deviations: 3816227771.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,780 | INFO     | mean x: 1749028999.5
[2025-06-04 20:02:31] 2025-06-04 11:13:46,780 | INFO     | mean y: 2489188.4411764704
[2025-06-04 20:02:31] 2025-06-04 11:13:46,780 | INFO     | -- intersect: -2533064480.672191
[2025-06-04 20:02:31] 2025-06-04 11:13:46,780 | INFO     | intersect: -2533064480.672191
[2025-06-04 20:02:31] 2025-06-04 11:13:46,781 | INFO     | chi2: 2.633133972897438
[2025-06-04 20:02:31] 2025-06-04 11:13:46,781 | INFO     | current chi2=2.633133972897438 (change=22.259013593527957 %)
[2025-06-04 20:02:31] 2025-06-04 11:13:46,781 | INFO     | right removable region: 203
[2025-06-04 20:02:31] 2025-06-04 11:13:46,781 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,783 | INFO     | sum of deviations: -55695904667.5
[2025-06-04 20:02:31] 2025-06-04 11:13:46,783 | INFO     | mean x: 1749029304.5
[2025-06-04 20:02:31] 2025-06-04 11:13:46,783 | INFO     | mean y: 2513174.4264705884
[2025-06-04 20:02:31] 2025-06-04 11:13:46,783 | INFO     | -- intersect: 37007636698.15884
[2025-06-04 20:02:31] 2025-06-04 11:13:46,783 | INFO     | intersect: 37007636698.15884
[2025-06-04 20:02:31] 2025-06-04 11:13:46,784 | INFO     | chi2: 1.0131265558609202
[2025-06-04 20:02:31] 2025-06-04 11:13:46,784 | INFO     | current chi2=1.0131265558609202 (change=70.08832113447217 %)
[2025-06-04 20:02:31] 2025-06-04 11:13:46,784 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,786 | INFO     | sum of deviations: -54679399112.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,786 | INFO     | mean x: 1749029457.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,786 | INFO     | mean y: 2512293.1608040202
[2025-06-04 20:02:31] 2025-06-04 11:13:46,786 | INFO     | -- intersect: 39140110547.209724
[2025-06-04 20:02:31] 2025-06-04 11:13:46,786 | INFO     | intersect: 39140110547.209724
[2025-06-04 20:02:31] 2025-06-04 11:13:46,787 | INFO     | chi2: 0.9827218007186589
[2025-06-04 20:02:31] 2025-06-04 11:13:46,787 | INFO     | current chi2=0.9827218007186589 (change=3.00108164832619 %)
[2025-06-04 20:02:31] 2025-06-04 11:13:46,787 | INFO     | left removable region: 20
[2025-06-04 20:02:31] 2025-06-04 11:13:46,788 | INFO     | sum of square deviations: 1900284932.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,789 | INFO     | sum of deviations: -27728092534.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,789 | INFO     | mean x: 1749029579.0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,789 | INFO     | mean y: 2513189.1092896173
[2025-06-04 20:02:31] 2025-06-04 11:13:46,789 | INFO     | -- intersect: 25523556478.219086
[2025-06-04 20:02:31] 2025-06-04 11:13:46,789 | INFO     | intersect: 25523556478.219086
[2025-06-04 20:02:31] 2025-06-04 11:13:46,790 | INFO     | chi2: 0.16715204463477346
[2025-06-04 20:02:31] 2025-06-04 11:13:46,790 | INFO     | -- intersect: 25523556478.219086
[2025-06-04 20:02:31] 2025-06-04 11:13:46,790 | INFO     | current memory leak: -14.59 B/s (using 183 data points, chi2=0.17)
[2025-06-04 20:02:31] 2025-06-04 11:13:46,791 | INFO     | ..............................
[2025-06-04 20:02:31] 2025-06-04 11:13:46,791 | INFO     | . Timing measurements:
[2025-06-04 20:02:31] 2025-06-04 11:13:46,791 | INFO     | . get job = 0 s
[2025-06-04 20:02:31] 2025-06-04 11:13:46,791 | INFO     | . initial setup = 2 s
[2025-06-04 20:02:31] 2025-06-04 11:13:46,791 | INFO     | . payload setup = 111 s
[2025-06-04 20:02:31] 2025-06-04 11:13:46,792 | INFO     | . stage-in = 0 s
[2025-06-04 20:02:31] 2025-06-04 11:13:46,792 | INFO     | . payload execution = 12834 s
[2025-06-04 20:02:31] 2025-06-04 11:13:46,792 | INFO     | . stage-out = 4 s
[2025-06-04 20:02:31] 2025-06-04 11:13:46,792 | INFO     | . log creation = 1 s
[2025-06-04 20:02:31] 2025-06-04 11:13:46,792 | INFO     | ..............................
[2025-06-04 20:02:31] 2025-06-04 11:13:46,918 | INFO     | 
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | job summary report
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | --------------------------------------------------
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | PanDA job id: 6678014540
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | task id: 45006595
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | errors: (none)
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | pilot state: finished 
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | transexitcode: 0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | exeerrorcode: 0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,919 | INFO     | exeerrordiag: 
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | exitcode: 0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | exitmsg: OK
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | cpuconsumptiontime: 47555 s
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | nevents: 400
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | neventsw: 0
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | pid: 8258
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | pgrp: 8258
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | corecount: 8
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | event service: False
[2025-06-04 20:02:31] 2025-06-04 11:13:46,920 | INFO     | sizes: {0: 2405178, 1: 2405178, 11: 2405412, 12: 2405440, 12949: 2434692, 12950: 2434691, 12955: 2443872, 13043: 2443986}
[2025-06-04 20:02:31] 2025-06-04 11:13:46,921 | INFO     | --------------------------------------------------
[2025-06-04 20:02:31] 2025-06-04 11:13:46,921 | INFO     | 
[2025-06-04 20:02:31] 2025-06-04 11:13:46,921 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 20:02:31] 2025-06-04 11:13:47,348 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,349 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,350 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:02:31] 2025-06-04 11:13:47,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,351 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:02:31] 2025-06-04 11:13:47,351 | INFO     | job 6678014540 has completed (purged errors)
[2025-06-04 20:02:31] 2025-06-04 11:13:47,351 | INFO     | overall cleanup function is called
[2025-06-04 20:02:31] 2025-06-04 11:13:48,361 | INFO     | --- collectZombieJob: --- 10, [8258]
[2025-06-04 20:02:31] 2025-06-04 11:13:48,361 | INFO     | zombie collector waiting for pid 8258
[2025-06-04 20:02:31] 2025-06-04 11:13:48,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:02:31] 2025-06-04 11:13:48,361 | INFO     | collected zombie processes
[2025-06-04 20:02:31] 2025-06-04 11:13:48,361 | INFO     | will attempt to kill all subprocesses of pid=8258
[2025-06-04 20:02:31] 2025-06-04 11:13:48,505 | INFO     | process IDs to be killed: [8258] (in reverse order)
[2025-06-04 20:02:31] 2025-06-04 11:13:49,320 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:02:31] 2025-06-04 11:13:49,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:02:31] 2025-06-04 11:13:49,324 | INFO     | did not find any defunct processes belonging to 8258
[2025-06-04 20:02:31] 2025-06-04 11:13:49,328 | INFO     | did not find any defunct processes belonging to 8258
[2025-06-04 20:02:31] 2025-06-04 11:13:49,328 | INFO     | ready for new job
[2025-06-04 20:02:31] 2025-06-04 11:13:49,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:02:31] 2025-06-04 11:13:49,331 | INFO     | **************************************
[2025-06-04 20:02:31] 2025-06-04 11:13:49,331 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:02:31] 2025-06-04 11:13:49,331 | INFO     | **************************************
[2025-06-04 20:02:31] 2025-06-04 11:13:49,331 | INFO     | 
[2025-06-04 20:02:31] 2025-06-04 11:13:49,332 | INFO     | pilot is running in a VM
[2025-06-04 20:02:31] 2025-06-04 11:13:49,332 | INFO     | architecture information:
[2025-06-04 20:02:31] 2025-06-04 11:13:49,346 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:02:31] 2025-06-04 11:13:49,542 | INFO     | cat /etc/os-release:
[2025-06-04 20:02:31] NAME="CentOS Linux"
[2025-06-04 20:02:31] VERSION="7 (Core)"
[2025-06-04 20:02:31] ID="centos"
[2025-06-04 20:02:31] ID_LIKE="rhel fedora"
[2025-06-04 20:02:31] VERSION_ID="7"
[2025-06-04 20:02:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:02:31] ANSI_COLOR="0;31"
[2025-06-04 20:02:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:02:31] HOME_URL="https://www.centos.org/"
[2025-06-04 20:02:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:02:31] 
[2025-06-04 20:02:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:02:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:02:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:02:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:02:31] 
[2025-06-04 20:02:31] 2025-06-04 11:13:49,542 | INFO     | **************************************
[2025-06-04 20:02:31] 2025-06-04 11:13:50,046 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 20:02:31] 2025-06-04 11:13:50,222 | INFO     | sufficient remaining disk space (497390977024 B)
[2025-06-04 20:02:31] 2025-06-04 11:13:50,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:02:31] 2025-06-04 11:13:50,222 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:02:31] 2025-06-04 11:13:50,222 | INFO     | update_server=False
[2025-06-04 20:02:31] 2025-06-04 11:13:50,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:02:31] 2025-06-04 11:13:50,223 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:02:31] 2025-06-04 11:13:50,223 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:02:31] 2025-06-04 11:13:50,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:02:31] 2025-06-04 11:13:50,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:02:31] 2025-06-04 11:13:50,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:02:31] 2025-06-04 11:13:50,652 | INFO     | all data control threads have been joined
[2025-06-04 20:02:31] 2025-06-04 11:13:50,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:02:31] 2025-06-04 11:13:50,969 | INFO     | all job control threads have been joined
[2025-06-04 20:02:31] 2025-06-04 11:13:51,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:02:31] 2025-06-04 11:13:51,194 | INFO     | aborting loop
[2025-06-04 20:02:31] 2025-06-04 11:13:51,228 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:51,306 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:51,583 | INFO     | all payload control threads have been joined
[2025-06-04 20:02:31] 2025-06-04 11:13:51,658 | INFO     | [data] control thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:51,659 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:51,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:02:31] 2025-06-04 11:13:51,975 | INFO     | [job] control thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,156 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,200 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,237 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,386 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,427 | INFO     | [job] validate thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,535 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,589 | INFO     | [payload] control thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,636 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:52,942 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:54,779 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:02:31] 2025-06-04 11:13:56,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593796958016)>', '<ExcThread(monitor, started 140593489483520)>']
[2025-06-04 20:02:31] 2025-06-04 11:13:56,259 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:02:31] 2025-06-04 11:13:56,259 | INFO     | [monitor] control thread has ended
[2025-06-04 20:02:31] 2025-06-04 11:14:01,061 | INFO     | all workflow threads have been joined
[2025-06-04 20:02:31] 2025-06-04 11:14:01,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:02:31] 2025-06-04 11:14:01,061 | INFO     | traces error code: 0
[2025-06-04 20:02:31] 2025-06-04 11:14:01,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:02:31] 2025-06-04 11:14:01,426 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:02:31] 2025-06-04 11:14:01,517 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:02:31] 2025-06-04 11:14:01,582 [wrapper] pilotpid: 1628
[2025-06-04 20:02:31] 2025-06-04 11:14:01,628 [wrapper] Pilot exit status: 0
[2025-06-04 20:02:31] 2025-06-04 11:14:02,110 [wrapper] pandaids: 6678014540
[2025-06-04 20:02:31] 2025-06-04 11:14:03,050 [wrapper] cleanup supervisor_pilot 21338 1629
[2025-06-04 20:02:31] 2025-06-04 11:14:03,116 [wrapper] Test setup, not cleaning
[2025-06-04 20:02:31] 2025-06-04 11:14:03,169 [wrapper] apfmon messages muted
[2025-06-04 20:02:31] 2025-06-04 11:14:03,234 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:02:31] 2025-06-04 11:14:03,294 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:02:31]  *** Error codes and diagnostics ***
[2025-06-04 20:02:31]     "exeErrorCode": 0,
[2025-06-04 20:02:31]     "exeErrorDiag": "",
[2025-06-04 20:02:31]     "pilotErrorCode": 0,
[2025-06-04 20:02:31]     "pilotErrorDiag": "",
[2025-06-04 20:02:31]  *** Listing of results directory ***
[2025-06-04 20:02:31] total 380440
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:41 pilot3.tar.gz
[2025-06-04 20:02:31] -rwx------. 1 boinc boinc     37140 Jun  3 21:54 runpilot2-wrapper.sh
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:54 queuedata.json
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc       100 Jun  4 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:02:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 09:35 run_atlas
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc       105 Jun  4 09:35 job.xml
[2025-06-04 20:02:31] -rw-r--r--. 2 boinc boinc 215572751 Jun  4 09:35 EVNT.45006593._001770.pool.root.1
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc      6392 Jun  4 09:35 init_data.xml
[2025-06-04 20:02:31] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:35 start_atlas.sh
[2025-06-04 20:02:31] drwxrwx--x. 2 boinc boinc        68 Jun  4 09:35 shared
[2025-06-04 20:02:31] -rw-r--r--. 2 boinc boinc    508877 Jun  4 09:35 input.tar.gz
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc         0 Jun  4 09:35 boinc_lockfile
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc      2522 Jun  4 09:35 pandaJob.out
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc    986745 Jun  4 09:35 agis_schedconf.cvmfs.json
[2025-06-04 20:02:31] drwx------. 4 boinc boinc      4096 Jun  4 09:35 pilot3
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc 167200814 Jun  4 13:10 HITS.45006595._044165.pool.root.1
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc       531 Jun  4 13:11 boinc_task_state.xml
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc      1016 Jun  4 13:12 memory_monitor_summary.json
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc   1603667 Jun  4 13:12 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc    360748 Jun  4 13:12 log.45006595._044165.job.log.tgz.1
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc        95 Jun  4 13:12 pilot_heartbeat.json
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc      7686 Jun  4 13:13 heartbeat.json
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc      4539 Jun  4 13:14 pilotlog.txt
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc   1124389 Jun  4 13:14 log.45006595._044165.job.log.1
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc       357 Jun  4 13:14 output.list
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:14 runtime_log
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc   1505280 Jun  4 13:14 result.tar.gz
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc      8659 Jun  4 13:14 runtime_log.err
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc       656 Jun  4 13:14 EtSLDmBtmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmewlKDmuJVNLm.diag
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc      8192 Jun  4 20:02 boinc_mmap_file
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc        28 Jun  4 20:02 wrapper_checkpoint.txt
[2025-06-04 20:02:31] -rw-r--r--. 1 boinc boinc     20738 Jun  4 20:02 stderr.txt
[2025-06-04 20:02:31] HITS file was successfully produced:
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc 167200814 Jun  4 13:10 shared/HITS.pool.root.1
[2025-06-04 20:02:31]  *** Contents of shared directory: ***
[2025-06-04 20:02:31] total 375796
[2025-06-04 20:02:31] -rw-r--r--. 2 boinc boinc 215572751 Jun  4 09:35 ATLAS.root_0
[2025-06-04 20:02:31] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:35 start_atlas.sh
[2025-06-04 20:02:31] -rw-r--r--. 2 boinc boinc    508877 Jun  4 09:35 input.tar.gz
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc 167200814 Jun  4 13:10 HITS.pool.root.1
[2025-06-04 20:02:31] -rw-------. 1 boinc boinc   1505280 Jun  4 13:14 result.tar.gz
20:02:33 (30379): run_atlas exited; CPU time 47716.414687
20:02:33 (30379): called boinc_finish(0)

</stderr_txt>
]]>

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