Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:56:47 (3499764): wrapper (7.7.26015): starting
08:56:47 (3499764): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 08:56:47] Arguments: --nthreads 4
[2025-06-04 08:56:47] Threads: 4
[2025-06-04 08:56:47] Checking for CVMFS
[2025-06-04 08:56:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:56:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:56:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:56:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:56:48] 2.9.2.0 2632174 2210 95648 146771 0 55 24624837 36864001 0 130560 0 2319205 99.994 524548 28934 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 08:56:48] CVMFS is ok
[2025-06-04 08:56:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:56:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:56:48] Further information can be found at the LHC@home message board.
[2025-06-04 08:56:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:56:48] Checking for apptainer binary...
[2025-06-04 08:56:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:56:48] Running /usr/bin/apptainer --version
[2025-06-04 08:56:48] apptainer version 1.3.6-6.1
[2025-06-04 08:56:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:56:48] thA319
[2025-06-04 08:56:48] apptainer works
[2025-06-04 08:56:48] Set ATHENA_PROC_NUMBER=4
[2025-06-04 08:56:48] Set ATHENA_CORE_NUMBER=4
[2025-06-04 08:56:48] Starting ATLAS job with PandaID=6677978444
[2025-06-04 08:56:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:59:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:59:52]  filetype=log
[2025-06-04 09:59:52]  guid=2465f1c5-192a-4147-9a90-945b85df5ce8
[2025-06-04 09:59:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:59:52]  is_altstaged=None
[2025-06-04 09:59:52]  is_tar=False
[2025-06-04 09:59:52]  lfn=log.45006595._043885.job.log.tgz.1
[2025-06-04 09:59:52]  mtime=0
[2025-06-04 09:59:52]  protocol_id=None
[2025-06-04 09:59:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:59:52]  replicas=None
[2025-06-04 09:59:52]  scope=mc23_13p6TeV
[2025-06-04 09:59:52]  status=None
[2025-06-04 09:59:52]  status_code=0
[2025-06-04 09:59:52]  storage_token=
[2025-06-04 09:59:52]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677978444/log.45006595._043885.job.log.tgz.1
[2025-06-04 09:59:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/6d/log.45006595._043885.job.log.tgz.1
[2025-06-04 09:59:52]  workdir=None
[2025-06-04 09:59:52] ]
[2025-06-04 09:59:52] 2025-06-04 07:59:28,511 | INFO     | transferring file log.45006595._043885.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677978444/log.45006595._043885.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 09:59:52] 2025-06-04 07:59:28,511 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677978444/log.45006595._043885.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0438
[2025-06-04 09:59:52] 2025-06-04 07:59:28,530 | INFO     | adding to output.list: log.45006595._043885.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/6d/log.45006595._043885.job.log.tg
[2025-06-04 09:59:52] 2025-06-04 07:59:28,531 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:59:52] 2025-06-04 07:59:28,531 | INFO     | summary of transferred files:
[2025-06-04 09:59:52] 2025-06-04 07:59:28,531 | INFO     |  -- lfn=log.45006595._043885.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:59:52] 2025-06-04 07:59:28,531 | INFO     | stage-out finished correctly
[2025-06-04 09:59:52] 2025-06-04 07:59:28,570 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:59:52] 2025-06-04 07:59:29,135 | INFO     | monitor loop #290: job 0:6677978444 is in state 'finished'
[2025-06-04 09:59:52] 2025-06-04 07:59:29,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:59:52] 2025-06-04 07:59:30,843 | INFO     | job 6677978444 has state=finished
[2025-06-04 09:59:52] 2025-06-04 07:59:30,844 | INFO     | preparing for final server update for job 6677978444 in state='finished'
[2025-06-04 09:59:52] 2025-06-04 07:59:30,844 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:59:52] 2025-06-04 07:59:30,844 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:59:52] 2025-06-04 07:59:30,844 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:59:52] 2025-06-04 07:59:30,845 | INFO     | job 6677978444 has finished - writing final server update
[2025-06-04 09:59:52] 2025-06-04 07:59:30,845 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:59:52] 2025-06-04 07:59:30,846 | INFO     | executing command: lscpu
[2025-06-04 09:59:52] 2025-06-04 07:59:30,867 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:59:52] 2025-06-04 07:59:31,639 | INFO     | monitor loop #291: job 0:6677978444 is in state 'finished'
[2025-06-04 09:59:52] 2025-06-04 07:59:31,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:59:52] 2025-06-04 07:59:34,091 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:59:52] 2025-06-04 07:59:34,091 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677978444/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:59:52] 2025-06-04 07:59:34,091 | INFO     | extracted standard info from prmon json
[2025-06-04 09:59:52] 2025-06-04 07:59:34,091 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:59:52] 2025-06-04 07:59:34,091 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:59:52] 2025-06-04 07:59:34,092 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:59:52] 2025-06-04 07:59:34,092 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:59:52] 2025-06-04 07:59:34,092 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:59:52] 2025-06-04 07:59:34,092 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 09:59:52] 2025-06-04 07:59:34,092 | INFO     | sum of deviations: -6913041855.0
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | mean x: 1749022190.0
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | mean y: 2493537.0545454547
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | -- intersect: 234447833890.98663
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | intersect: 234447833890.98663
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | chi2: 0.11028681711460481
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | -- intersect: 234447833890.98663
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | current memory leak: -134.04 B/s (using 55 data points, chi2=0.11)
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | ..............................
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | . Timing measurements:
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | . get job = 0 s
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | . initial setup = 1 s
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | . payload setup = 4 s
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | . stage-in = 0 s
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | . payload execution = 3730 s
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | . stage-out = 0 s
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | . log creation = 0 s
[2025-06-04 09:59:52] 2025-06-04 07:59:34,093 | INFO     | ..............................
[2025-06-04 09:59:52] 2025-06-04 07:59:34,133 | INFO     | 
[2025-06-04 09:59:52] 2025-06-04 07:59:34,133 | INFO     | job summary report
[2025-06-04 09:59:52] 2025-06-04 07:59:34,133 | INFO     | --------------------------------------------------
[2025-06-04 09:59:52] 2025-06-04 07:59:34,133 | INFO     | PanDA job id: 6677978444
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | task id: 45006595
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | errors: (none)
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | pilot state: finished 
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | transexitcode: 0
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | exeerrorcode: 0
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | exeerrordiag: 
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | exitcode: 0
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | exitmsg: OK
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | cpuconsumptiontime: 13969 s
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | nevents: 400
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | neventsw: 0
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | pid: 3510106
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | pgrp: 3510106
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | corecount: 4
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | event service: False
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | sizes: {0: 2405187, 3: 2405393, 11: 2405421, 3738: 2431184, 3739: 2440187, 3744: 2440301}
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | --------------------------------------------------
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | 
[2025-06-04 09:59:52] 2025-06-04 07:59:34,134 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | job 6677978444 has completed (purged errors)
[2025-06-04 09:59:52] 2025-06-04 07:59:34,152 | INFO     | overall cleanup function is called
[2025-06-04 09:59:52] 2025-06-04 07:59:35,159 | INFO     | --- collectZombieJob: --- 10, [3510106]
[2025-06-04 09:59:52] 2025-06-04 07:59:35,160 | INFO     | zombie collector waiting for pid 3510106
[2025-06-04 09:59:52] 2025-06-04 07:59:35,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:59:52] 2025-06-04 07:59:35,160 | INFO     | collected zombie processes
[2025-06-04 09:59:52] 2025-06-04 07:59:35,160 | INFO     | will attempt to kill all subprocesses of pid=3510106
[2025-06-04 09:59:52] 2025-06-04 07:59:35,211 | INFO     | process IDs to be killed: [3510106] (in reverse order)
[2025-06-04 09:59:52] 2025-06-04 07:59:35,245 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:59:52] 2025-06-04 07:59:35,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:59:52] 2025-06-04 07:59:35,247 | INFO     | did not find any defunct processes belonging to 3510106
[2025-06-04 09:59:52] 2025-06-04 07:59:35,249 | INFO     | did not find any defunct processes belonging to 3510106
[2025-06-04 09:59:52] 2025-06-04 07:59:35,249 | INFO     | ready for new job
[2025-06-04 09:59:52] 2025-06-04 07:59:35,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:59:52] 2025-06-04 07:59:35,249 | INFO     | **************************************
[2025-06-04 09:59:52] 2025-06-04 07:59:35,249 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:59:52] 2025-06-04 07:59:35,249 | INFO     | **************************************
[2025-06-04 09:59:52] 2025-06-04 07:59:35,250 | INFO     | 
[2025-06-04 09:59:52] 2025-06-04 07:59:35,250 | INFO     | architecture information:
[2025-06-04 09:59:52] 2025-06-04 07:59:35,250 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:59:52] 2025-06-04 07:59:35,263 | INFO     | cat /etc/os-release:
[2025-06-04 09:59:52] NAME="CentOS Linux"
[2025-06-04 09:59:52] VERSION="7 (Core)"
[2025-06-04 09:59:52] ID="centos"
[2025-06-04 09:59:52] ID_LIKE="rhel fedora"
[2025-06-04 09:59:52] VERSION_ID="7"
[2025-06-04 09:59:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:59:52] ANSI_COLOR="0;31"
[2025-06-04 09:59:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:59:52] HOME_URL="https://www.centos.org/"
[2025-06-04 09:59:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:59:52] 
[2025-06-04 09:59:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:59:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:59:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:59:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:59:52] 
[2025-06-04 09:59:52] 2025-06-04 07:59:35,264 | INFO     | **************************************
[2025-06-04 09:59:52] 2025-06-04 07:59:35,767 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 09:59:52] 2025-06-04 07:59:35,785 | INFO     | sufficient remaining disk space (326864207872 B)
[2025-06-04 09:59:52] 2025-06-04 07:59:35,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | INFO     | update_server=False
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | INFO     | aborting loop
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:59:52] 2025-06-04 07:59:35,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:59:52] 2025-06-04 07:59:36,251 | INFO     | all job control threads have been joined
[2025-06-04 09:59:52] 2025-06-04 07:59:36,411 | INFO     | all data control threads have been joined
[2025-06-04 09:59:52] 2025-06-04 07:59:36,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:59:52] 2025-06-04 07:59:36,791 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:36,792 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:36,792 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:36,916 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:37,049 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:37,140 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:37,257 | INFO     | [job] control thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:37,291 | INFO     | all payload control threads have been joined
[2025-06-04 09:59:52] 2025-06-04 07:59:37,417 | INFO     | [data] control thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:37,794 | INFO     | [job] validate thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:37,899 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:38,019 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:38,020 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:38,296 | INFO     | [payload] control thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:38,588 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:39,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:59:52] 2025-06-04 07:59:43,133 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:46,276 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:59:52] 2025-06-04 07:59:47,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:59:52] 2025-06-04 07:59:47,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114770782016)>', '<ExcThread(monitor, started 140113761785600)>']
[2025-06-04 09:59:52] 2025-06-04 07:59:47,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:59:52] 2025-06-04 07:59:47,848 | INFO     | [monitor] control thread has ended
[2025-06-04 09:59:52] 2025-06-04 07:59:52,678 | INFO     | all workflow threads have been joined
[2025-06-04 09:59:52] 2025-06-04 07:59:52,678 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:59:52] 2025-06-04 07:59:52,678 | INFO     | traces error code: 0
[2025-06-04 09:59:52] 2025-06-04 07:59:52,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:59:52] 2025-06-04 07:59:52,749 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:59:52] 2025-06-04 07:59:52,753 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:59:52] 2025-06-04 07:59:52,757 [wrapper] pilotpid: 3503468
[2025-06-04 09:59:52] 2025-06-04 07:59:52,760 [wrapper] Pilot exit status: 0
[2025-06-04 09:59:52] 2025-06-04 07:59:52,772 [wrapper] pandaids: 6677978444
[2025-06-04 09:59:52] 2025-06-04 07:59:52,795 [wrapper] cleanup supervisor_pilot 3519759 3503469
[2025-06-04 09:59:52] 2025-06-04 07:59:52,799 [wrapper] Test setup, not cleaning
[2025-06-04 09:59:52] 2025-06-04 07:59:52,803 [wrapper] apfmon messages muted
[2025-06-04 09:59:52] 2025-06-04 07:59:52,807 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:59:52] 2025-06-04 07:59:52,810 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:59:52]  *** Error codes and diagnostics ***
[2025-06-04 09:59:52]     "exeErrorCode": 0,
[2025-06-04 09:59:52]     "exeErrorDiag": "",
[2025-06-04 09:59:52]     "pilotErrorCode": 0,
[2025-06-04 09:59:52]     "pilotErrorDiag": "",
[2025-06-04 09:59:52]  *** Listing of results directory ***
[2025-06-04 09:59:52] total 387792
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 09:59:52] -rwx------ 1 boinc boinc     37140 Jun  3 21:35 runpilot2-wrapper.sh
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:35 queuedata.json
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc       100 Jun  4 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:59:52] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 08:56 run_atlas
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc       105 Jun  4 08:56 job.xml
[2025-06-04 09:59:52] -rw-r--r-- 2 boinc boinc 215146065 Jun  4 08:56 EVNT.45006593._001759.pool.root.1
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc      6853 Jun  4 08:56 init_data.xml
[2025-06-04 09:59:52] drwxrwx--x 2 boinc boinc      4096 Jun  4 08:56 shared
[2025-06-04 09:59:52] -rw-r--r-- 2 boinc boinc    508879 Jun  4 08:56 input.tar.gz
[2025-06-04 09:59:52] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:56 start_atlas.sh
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc         0 Jun  4 08:56 boinc_lockfile
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc      2525 Jun  4 08:56 pandaJob.out
[2025-06-04 09:59:52] -rw------- 1 boinc boinc    986745 Jun  4 08:56 agis_schedconf.cvmfs.json
[2025-06-04 09:59:52] -rw------- 1 boinc boinc   1603667 Jun  4 08:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:59:52] drwx------ 4 boinc boinc      4096 Jun  4 08:56 pilot3
[2025-06-04 09:59:52] -rw------- 1 boinc boinc 176886323 Jun  4 09:59 HITS.45006595._043885.pool.root.1
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc       529 Jun  4 09:59 boinc_task_state.xml
[2025-06-04 09:59:52] -rw------- 1 boinc boinc        95 Jun  4 09:59 pilot_heartbeat.json
[2025-06-04 09:59:52] -rw------- 1 boinc boinc      1021 Jun  4 09:59 memory_monitor_summary.json
[2025-06-04 09:59:52] -rw------- 1 boinc boinc    235811 Jun  4 09:59 log.45006595._043885.job.log.tgz.1
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc      8192 Jun  4 09:59 boinc_mmap_file
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc        27 Jun  4 09:59 wrapper_checkpoint.txt
[2025-06-04 09:59:52] -rw------- 1 boinc boinc      7661 Jun  4 09:59 heartbeat.json
[2025-06-04 09:59:52] -rw------- 1 boinc boinc      4552 Jun  4 09:59 pilotlog.txt
[2025-06-04 09:59:52] -rw------- 1 boinc boinc    378454 Jun  4 09:59 log.45006595._043885.job.log.1
[2025-06-04 09:59:52] -rw------- 1 boinc boinc       357 Jun  4 09:59 output.list
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc       620 Jun  4 09:59 runtime_log
[2025-06-04 09:59:52] -rw------- 1 boinc boinc    634880 Jun  4 09:59 result.tar.gz
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc      8733 Jun  4 09:59 runtime_log.err
[2025-06-04 09:59:52] -rw------- 1 boinc boinc       658 Jun  4 09:59 ZopNDmZbmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhulKDmJFF31m.diag
[2025-06-04 09:59:52] -rw-r--r-- 1 boinc boinc     21174 Jun  4 09:59 stderr.txt
[2025-06-04 09:59:52] HITS file was successfully produced:
[2025-06-04 09:59:52] -rw------- 1 boinc boinc 176886323 Jun  4 09:59 shared/HITS.pool.root.1
[2025-06-04 09:59:52]  *** Contents of shared directory: ***
[2025-06-04 09:59:52] total 383992
[2025-06-04 09:59:52] -rw-r--r-- 2 boinc boinc 215146065 Jun  4 08:56 ATLAS.root_0
[2025-06-04 09:59:52] -rw-r--r-- 2 boinc boinc    508879 Jun  4 08:56 input.tar.gz
[2025-06-04 09:59:52] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:56 start_atlas.sh
[2025-06-04 09:59:52] -rw------- 1 boinc boinc 176886323 Jun  4 09:59 HITS.pool.root.1
[2025-06-04 09:59:52] -rw------- 1 boinc boinc    634880 Jun  4 09:59 result.tar.gz
09:59:53 (3499764): run_atlas exited; CPU time 13978.507743
09:59:53 (3499764): called boinc_finish(0)

</stderr_txt>
]]>

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