Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:09:43 (1177088): wrapper (7.7.26015): starting
09:09:43 (1177088): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 09:09:43] Arguments: --nthreads 4
[2025-06-04 09:09:43] Threads: 4
[2025-06-04 09:09:43] Checking for CVMFS
[2025-06-04 09:09:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:09:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:09:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:09:44] 2.9.2.0 312665 2198 93468 146771 0 56 29999051 36864001 0 130560 0 2319284 99.994 523219 31199 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 09:09:44] CVMFS is ok
[2025-06-04 09:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:09:44] Further information can be found at the LHC@home message board.
[2025-06-04 09:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:09:44] Checking for apptainer binary...
[2025-06-04 09:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:09:44] Running /usr/bin/apptainer --version
[2025-06-04 09:09:44] apptainer version 1.3.6-6.1
[2025-06-04 09:09:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:09:44] thA383a
[2025-06-04 09:09:44] apptainer works
[2025-06-04 09:09:44] Set ATHENA_PROC_NUMBER=4
[2025-06-04 09:09:44] Set ATHENA_CORE_NUMBER=4
[2025-06-04 09:09:44] Starting ATLAS job with PandaID=6677976125
[2025-06-04 09:09:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:12:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:12:28]  guid=5a1a4c93-cacc-4360-b3f9-4c395053255c
[2025-06-04 10:12:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:12:28]  is_altstaged=None
[2025-06-04 10:12:28]  is_tar=False
[2025-06-04 10:12:28]  lfn=log.45006595._043100.job.log.tgz.1
[2025-06-04 10:12:28]  mtime=0
[2025-06-04 10:12:28]  protocol_id=None
[2025-06-04 10:12:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:12:28]  replicas=None
[2025-06-04 10:12:28]  scope=mc23_13p6TeV
[2025-06-04 10:12:28]  status=None
[2025-06-04 10:12:28]  status_code=0
[2025-06-04 10:12:28]  storage_token=
[2025-06-04 10:12:28]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677976125/log.45006595._043100.job.log.tgz.1
[2025-06-04 10:12:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/15/log.45006595._043100.job.log.tgz.1
[2025-06-04 10:12:28]  workdir=None
[2025-06-04 10:12:28] ]
[2025-06-04 10:12:28] 2025-06-04 08:12:09,932 | INFO     | transferring file log.45006595._043100.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677976125/log.45006595._043100.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 10:12:28] 2025-06-04 08:12:09,932 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677976125/log.45006595._043100.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0431
[2025-06-04 10:12:28] 2025-06-04 08:12:09,953 | INFO     | adding to output.list: log.45006595._043100.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/15/log.45006595._043100.job.log.tg
[2025-06-04 10:12:28] 2025-06-04 08:12:09,954 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:12:28] 2025-06-04 08:12:09,954 | INFO     | summary of transferred files:
[2025-06-04 10:12:28] 2025-06-04 08:12:09,954 | INFO     |  -- lfn=log.45006595._043100.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:12:28] 2025-06-04 08:12:09,954 | INFO     | stage-out finished correctly
[2025-06-04 10:12:28] 2025-06-04 08:12:10,037 | INFO     | PID=1180791 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 10:12:28] 2025-06-04 08:12:10,651 | INFO     | monitor loop #289: job 0:6677976125 is in state 'finished'
[2025-06-04 10:12:28] 2025-06-04 08:12:10,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:12:28] 2025-06-04 08:12:11,410 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:12:28] 2025-06-04 08:12:11,452 | INFO     | job 6677976125 has state=finished
[2025-06-04 10:12:28] 2025-06-04 08:12:11,452 | INFO     | preparing for final server update for job 6677976125 in state='finished'
[2025-06-04 10:12:28] 2025-06-04 08:12:11,453 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:12:28] 2025-06-04 08:12:11,453 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:12:28] 2025-06-04 08:12:11,453 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:12:28] 2025-06-04 08:12:11,453 | INFO     | job 6677976125 has finished - writing final server update
[2025-06-04 10:12:28] 2025-06-04 08:12:11,453 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:12:28] 2025-06-04 08:12:11,454 | INFO     | executing command: lscpu
[2025-06-04 10:12:28] 2025-06-04 08:12:11,475 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:12:28] 2025-06-04 08:12:13,043 | INFO     | 3742s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 10:12:28] 2025-06-04 08:12:13,154 | INFO     | monitor loop #290: job 0:6677976125 is in state 'finished'
[2025-06-04 10:12:28] 2025-06-04 08:12:13,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:12:28] 2025-06-04 08:12:14,961 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:12:28] 2025-06-04 08:12:14,961 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677976125/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:12:28] 2025-06-04 08:12:14,962 | INFO     | extracted standard info from prmon json
[2025-06-04 10:12:28] 2025-06-04 08:12:14,962 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:12:28] 2025-06-04 08:12:14,962 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:12:28] 2025-06-04 08:12:14,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:12:28] 2025-06-04 08:12:14,962 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:12:28] 2025-06-04 08:12:14,963 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:12:28] 2025-06-04 08:12:14,963 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 10:12:28] 2025-06-04 08:12:14,963 | INFO     | sum of deviations: -841724542.9999999
[2025-06-04 10:12:28] 2025-06-04 08:12:14,963 | INFO     | mean x: 1749022937.5
[2025-06-04 10:12:28] 2025-06-04 08:12:14,963 | INFO     | mean y: 2417126.6666666665
[2025-06-04 10:12:28] 2025-06-04 08:12:14,963 | INFO     | -- intersect: 30164043281.348415
[2025-06-04 10:12:28] 2025-06-04 08:12:14,963 | INFO     | intersect: 30164043281.348415
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | chi2: 0.041567841584046326
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | -- intersect: 30164043281.348415
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | current memory leak: -17.24 B/s (using 54 data points, chi2=0.04)
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | ..............................
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | . Timing measurements:
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | . get job = 0 s
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | . initial setup = 1 s
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | . payload setup = 5 s
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | . stage-in = 0 s
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | . payload execution = 3714 s
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | . stage-out = 0 s
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | . log creation = 0 s
[2025-06-04 10:12:28] 2025-06-04 08:12:14,964 | INFO     | ..............................
[2025-06-04 10:12:28] 2025-06-04 08:12:15,005 | INFO     | 
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | job summary report
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | --------------------------------------------------
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | PanDA job id: 6677976125
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | task id: 45006595
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | errors: (none)
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | pilot state: finished 
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | transexitcode: 0
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | exeerrorcode: 0
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | exeerrordiag: 
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | exitcode: 0
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | exitmsg: OK
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | cpuconsumptiontime: 14009 s
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | nevents: 400
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | neventsw: 0
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | pid: 1187421
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | pgrp: 1187421
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | corecount: 4
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | event service: False
[2025-06-04 10:12:28] 2025-06-04 08:12:15,006 | INFO     | sizes: {0: 2405187, 4: 2405393, 11: 2405421, 3723: 2431185, 3724: 2440132, 3725: 2440188, 3729: 2440486}
[2025-06-04 10:12:28] 2025-06-04 08:12:15,007 | INFO     | --------------------------------------------------
[2025-06-04 10:12:28] 2025-06-04 08:12:15,007 | INFO     | 
[2025-06-04 10:12:28] 2025-06-04 08:12:15,007 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 10:12:28] 2025-06-04 08:12:15,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | job 6677976125 has completed (purged errors)
[2025-06-04 10:12:28] 2025-06-04 08:12:15,027 | INFO     | overall cleanup function is called
[2025-06-04 10:12:28] 2025-06-04 08:12:16,034 | INFO     | --- collectZombieJob: --- 10, [1187421]
[2025-06-04 10:12:28] 2025-06-04 08:12:16,034 | INFO     | zombie collector waiting for pid 1187421
[2025-06-04 10:12:28] 2025-06-04 08:12:16,034 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:12:28] 2025-06-04 08:12:16,034 | INFO     | collected zombie processes
[2025-06-04 10:12:28] 2025-06-04 08:12:16,034 | INFO     | will attempt to kill all subprocesses of pid=1187421
[2025-06-04 10:12:28] 2025-06-04 08:12:16,081 | INFO     | process IDs to be killed: [1187421] (in reverse order)
[2025-06-04 10:12:28] 2025-06-04 08:12:16,115 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:12:28] 2025-06-04 08:12:16,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:12:28] 2025-06-04 08:12:16,117 | INFO     | did not find any defunct processes belonging to 1187421
[2025-06-04 10:12:28] 2025-06-04 08:12:16,118 | INFO     | did not find any defunct processes belonging to 1187421
[2025-06-04 10:12:28] 2025-06-04 08:12:16,119 | INFO     | ready for new job
[2025-06-04 10:12:28] 2025-06-04 08:12:16,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:12:28] 2025-06-04 08:12:16,119 | INFO     | **************************************
[2025-06-04 10:12:28] 2025-06-04 08:12:16,119 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:12:28] 2025-06-04 08:12:16,119 | INFO     | **************************************
[2025-06-04 10:12:28] 2025-06-04 08:12:16,119 | INFO     | 
[2025-06-04 10:12:28] 2025-06-04 08:12:16,120 | INFO     | architecture information:
[2025-06-04 10:12:28] 2025-06-04 08:12:16,120 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:12:28] 2025-06-04 08:12:16,134 | INFO     | cat /etc/os-release:
[2025-06-04 10:12:28] NAME="CentOS Linux"
[2025-06-04 10:12:28] VERSION="7 (Core)"
[2025-06-04 10:12:28] ID="centos"
[2025-06-04 10:12:28] ID_LIKE="rhel fedora"
[2025-06-04 10:12:28] VERSION_ID="7"
[2025-06-04 10:12:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:12:28] ANSI_COLOR="0;31"
[2025-06-04 10:12:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:12:28] HOME_URL="https://www.centos.org/"
[2025-06-04 10:12:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:12:28] 
[2025-06-04 10:12:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:12:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:12:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:12:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:12:28] 
[2025-06-04 10:12:28] 2025-06-04 08:12:16,135 | INFO     | **************************************
[2025-06-04 10:12:28] 2025-06-04 08:12:16,638 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 10:12:28] 2025-06-04 08:12:16,655 | INFO     | sufficient remaining disk space (225127170048 B)
[2025-06-04 10:12:28] 2025-06-04 08:12:16,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:12:28] 2025-06-04 08:12:16,655 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:12:28] 2025-06-04 08:12:16,655 | INFO     | update_server=False
[2025-06-04 10:12:28] 2025-06-04 08:12:16,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:12:28] 2025-06-04 08:12:16,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:12:28] 2025-06-04 08:12:16,656 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:12:28] 2025-06-04 08:12:16,656 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:12:28] 2025-06-04 08:12:16,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:12:28] 2025-06-04 08:12:16,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:12:28] 2025-06-04 08:12:16,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:12:28] 2025-06-04 08:12:16,663 | INFO     | aborting loop
[2025-06-04 10:12:28] 2025-06-04 08:12:17,135 | INFO     | all payload control threads have been joined
[2025-06-04 10:12:28] 2025-06-04 08:12:17,434 | INFO     | all job control threads have been joined
[2025-06-04 10:12:28] 2025-06-04 08:12:17,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:12:28] 2025-06-04 08:12:17,487 | INFO     | all data control threads have been joined
[2025-06-04 10:12:28] 2025-06-04 08:12:17,661 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:17,662 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:17,668 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:17,703 | INFO     | [job] validate thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:17,779 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:17,855 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:17,994 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:18,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:12:28] 2025-06-04 08:12:18,136 | INFO     | [payload] control thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:18,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:18,440 | INFO     | [job] control thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:18,493 | INFO     | [data] control thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:18,501 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:18,530 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:19,119 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:20,019 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:21,465 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:12:28] 2025-06-04 08:12:23,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947740956480)>', '<ExcThread(monitor, started 139946702644992)>']
[2025-06-04 10:12:28] 2025-06-04 08:12:23,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:12:28] 2025-06-04 08:12:23,694 | INFO     | [monitor] control thread has ended
[2025-06-04 10:12:28] 2025-06-04 08:12:28,139 | INFO     | all workflow threads have been joined
[2025-06-04 10:12:28] 2025-06-04 08:12:28,140 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:12:28] 2025-06-04 08:12:28,140 | INFO     | traces error code: 0
[2025-06-04 10:12:28] 2025-06-04 08:12:28,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:12:28] 2025-06-04 08:12:28,220 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:12:28] 2025-06-04 08:12:28,224 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:12:28] 2025-06-04 08:12:28,228 [wrapper] pilotpid: 1180791
[2025-06-04 10:12:28] 2025-06-04 08:12:28,232 [wrapper] Pilot exit status: 0
[2025-06-04 10:12:28] 2025-06-04 08:12:28,244 [wrapper] pandaids: 6677976125
[2025-06-04 10:12:28] 2025-06-04 08:12:28,268 [wrapper] cleanup supervisor_pilot 1197225 1180792
[2025-06-04 10:12:28] 2025-06-04 08:12:28,271 [wrapper] Test setup, not cleaning
[2025-06-04 10:12:28] 2025-06-04 08:12:28,276 [wrapper] apfmon messages muted
[2025-06-04 10:12:28] 2025-06-04 08:12:28,279 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:12:28] 2025-06-04 08:12:28,283 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:12:28]  *** Error codes and diagnostics ***
[2025-06-04 10:12:28]     "exeErrorCode": 0,
[2025-06-04 10:12:28]     "exeErrorDiag": "",
[2025-06-04 10:12:28]     "pilotErrorCode": 0,
[2025-06-04 10:12:28]     "pilotErrorDiag": "",
[2025-06-04 10:12:28]  *** Listing of results directory ***
[2025-06-04 10:12:28] total 386900
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 10:12:28] -rwx------ 1 boinc boinc     37140 Jun  3 21:04 runpilot2-wrapper.sh
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:04 queuedata.json
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:12:28] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:09 run_atlas
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:09 job.xml
[2025-06-04 10:12:28] -rw-r--r-- 2 boinc boinc 215482225 Jun  4 09:09 EVNT.45006593._001728.pool.root.1
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc      6861 Jun  4 09:09 init_data.xml
[2025-06-04 10:12:28] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:09 shared
[2025-06-04 10:12:28] -rw-r--r-- 2 boinc boinc    508879 Jun  4 09:09 input.tar.gz
[2025-06-04 10:12:28] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:09 start_atlas.sh
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:09 boinc_lockfile
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc      2525 Jun  4 09:09 pandaJob.out
[2025-06-04 10:12:28] -rw------- 1 boinc boinc    986745 Jun  4 09:09 agis_schedconf.cvmfs.json
[2025-06-04 10:12:28] -rw------- 1 boinc boinc   1603667 Jun  4 09:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:12:28] drwx------ 4 boinc boinc      4096 Jun  4 09:09 pilot3
[2025-06-04 10:12:28] -rw------- 1 boinc boinc 175672658 Jun  4 10:11 HITS.45006595._043100.pool.root.1
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:11 boinc_task_state.xml
[2025-06-04 10:12:28] -rw------- 1 boinc boinc      1035 Jun  4 10:12 memory_monitor_summary.json
[2025-06-04 10:12:28] -rw------- 1 boinc boinc    222133 Jun  4 10:12 log.45006595._043100.job.log.tgz.1
[2025-06-04 10:12:28] -rw------- 1 boinc boinc        95 Jun  4 10:12 pilot_heartbeat.json
[2025-06-04 10:12:28] -rw------- 1 boinc boinc      7658 Jun  4 10:12 heartbeat.json
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:12 boinc_mmap_file
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc        27 Jun  4 10:12 wrapper_checkpoint.txt
[2025-06-04 10:12:28] -rw------- 1 boinc boinc      4480 Jun  4 10:12 pilotlog.txt
[2025-06-04 10:12:28] -rw------- 1 boinc boinc    377718 Jun  4 10:12 log.45006595._043100.job.log.1
[2025-06-04 10:12:28] -rw------- 1 boinc boinc       357 Jun  4 10:12 output.list
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:12 runtime_log
[2025-06-04 10:12:28] -rw------- 1 boinc boinc    614400 Jun  4 10:12 result.tar.gz
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc      8738 Jun  4 10:12 runtime_log.err
[2025-06-04 10:12:28] -rw------- 1 boinc boinc       659 Jun  4 10:12 UezMDml6lg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUeZKDmXuCxSo.diag
[2025-06-04 10:12:28] -rw-r--r-- 1 boinc boinc     21424 Jun  4 10:12 stderr.txt
[2025-06-04 10:12:28] HITS file was successfully produced:
[2025-06-04 10:12:28] -rw------- 1 boinc boinc 175672658 Jun  4 10:11 shared/HITS.pool.root.1
[2025-06-04 10:12:28]  *** Contents of shared directory: ***
[2025-06-04 10:12:28] total 383112
[2025-06-04 10:12:28] -rw-r--r-- 2 boinc boinc 215482225 Jun  4 09:09 ATLAS.root_0
[2025-06-04 10:12:28] -rw-r--r-- 2 boinc boinc    508879 Jun  4 09:09 input.tar.gz
[2025-06-04 10:12:28] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:09 start_atlas.sh
[2025-06-04 10:12:28] -rw------- 1 boinc boinc 175672658 Jun  4 10:11 HITS.pool.root.1
[2025-06-04 10:12:28] -rw------- 1 boinc boinc    614400 Jun  4 10:12 result.tar.gz
10:12:29 (1177088): run_atlas exited; CPU time 14016.095528
10:12:29 (1177088): called boinc_finish(0)

</stderr_txt>
]]>

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