Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
05:35:12 (365528): wrapper (7.7.26015): starting
05:35:12 (365528): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 05:35:12] Arguments: --nthreads 4
[2025-06-05 05:35:12] Threads: 4
[2025-06-05 05:35:12] Checking for CVMFS
[2025-06-05 05:35:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:35:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:35:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:35:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:35:12] 2.12.7.0 3155475 3135 54364 146804 3 56 5307955 6144001 917 130560 0 4027723 99.994 761339 14084 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-06-05 05:35:12] CVMFS is ok
[2025-06-05 05:35:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:35:12] Checking for apptainer binary...
[2025-06-05 05:35:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:35:12] Running /usr/bin/apptainer --version
[2025-06-05 05:35:12] apptainer version 1.4.0
[2025-06-05 05:35:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:35:12] TS-P320
[2025-06-05 05:35:12] apptainer works
[2025-06-05 05:35:12] Set ATHENA_PROC_NUMBER=4
[2025-06-05 05:35:12] Set ATHENA_CORE_NUMBER=4
[2025-06-05 05:35:12] Starting ATLAS job with PandaID=6677786689
[2025-06-05 05:35:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:25:40]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:25:40] 2025-06-05 05:25:25,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:25:40] 2025-06-05 05:25:25,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:25:40] 2025-06-05 05:25:25,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:25:40] 2025-06-05 05:25:25,722 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:25:40] 2025-06-05 05:25:25,722 | INFO     | sum of square deviations: 390582207.0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,722 | INFO     | sum of deviations: -2907583483.0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,722 | INFO     | mean x: 1749097800.5
[2025-06-05 07:25:40] 2025-06-05 05:25:25,722 | INFO     | mean y: 2394456.9444444445
[2025-06-05 07:25:40] 2025-06-05 05:25:25,723 | INFO     | -- intersect: 13023079433.732004
[2025-06-05 07:25:40] 2025-06-05 05:25:25,723 | INFO     | intersect: 13023079433.732004
[2025-06-05 07:25:40] 2025-06-05 05:25:25,723 | INFO     | chi2: 1.4479241843946022
[2025-06-05 07:25:40] 2025-06-05 05:25:25,723 | INFO     | sum of square deviations: 338804492.0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,723 | INFO     | sum of deviations: -2521294333.9999967
[2025-06-05 07:25:40] 2025-06-05 05:25:25,723 | INFO     | mean x: 1749097648.0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,723 | INFO     | mean y: 2395599.1165048545
[2025-06-05 07:25:40] 2025-06-05 05:25:25,723 | INFO     | -- intersect: 13018722400.105673
[2025-06-05 07:25:40] 2025-06-05 05:25:25,724 | INFO     | intersect: 13018722400.105673
[2025-06-05 07:25:40] 2025-06-05 05:25:25,724 | INFO     | chi2: 1.4479064788371598
[2025-06-05 07:25:40] 2025-06-05 05:25:25,724 | INFO     | current chi2=1.4479064788371598 (change=0.001222823517503956 %)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,724 | INFO     | right removable region: 102
[2025-06-05 07:25:40] 2025-06-05 05:25:25,724 | INFO     | sum of square deviations: 338804492.0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,725 | INFO     | sum of deviations: -14241659142.000002
[2025-06-05 07:25:40] 2025-06-05 05:25:25,725 | INFO     | mean x: 1749097953.0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,725 | INFO     | mean y: 2426669.0485436893
[2025-06-05 07:25:40] 2025-06-05 05:25:25,725 | INFO     | -- intersect: 73525822730.14899
[2025-06-05 07:25:40] 2025-06-05 05:25:25,725 | INFO     | intersect: 73525822730.14899
[2025-06-05 07:25:40] 2025-06-05 05:25:25,725 | INFO     | chi2: 0.1023497519406406
[2025-06-05 07:25:40] 2025-06-05 05:25:25,725 | INFO     | current chi2=0.1023497519406406 (change=92.93127685525644 %)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,725 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 07:25:40] 2025-06-05 05:25:25,726 | INFO     | sum of deviations: -11461357374.500004
[2025-06-05 07:25:40] 2025-06-05 05:25:25,726 | INFO     | mean x: 1749098105.5
[2025-06-05 07:25:40] 2025-06-05 05:25:25,726 | INFO     | mean y: 2417645.3775510206
[2025-06-05 07:25:40] 2025-06-05 05:25:25,726 | INFO     | -- intersect: 68699579533.30225
[2025-06-05 07:25:40] 2025-06-05 05:25:25,726 | INFO     | intersect: 68699579533.30225
[2025-06-05 07:25:40] 2025-06-05 05:25:25,726 | INFO     | chi2: 0.09976147485739867
[2025-06-05 07:25:40] 2025-06-05 05:25:25,726 | INFO     | current chi2=0.09976147485739867 (change=2.5288552577470247 %)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,726 | INFO     | left removable region: 20
[2025-06-05 07:25:40] 2025-06-05 05:25:25,726 | INFO     | sum of square deviations: 170944600.5
[2025-06-05 07:25:40] 2025-06-05 05:25:25,727 | INFO     | sum of deviations: -5384657727.499998
[2025-06-05 07:25:40] 2025-06-05 05:25:25,727 | INFO     | mean x: 1749098227.5
[2025-06-05 07:25:40] 2025-06-05 05:25:25,727 | INFO     | mean y: 2397948.451219512
[2025-06-05 07:25:40] 2025-06-05 05:25:25,727 | INFO     | -- intersect: 55097997688.46421
[2025-06-05 07:25:40] 2025-06-05 05:25:25,727 | INFO     | intersect: 55097997688.46421
[2025-06-05 07:25:40] 2025-06-05 05:25:25,727 | INFO     | chi2: 0.0801252848548762
[2025-06-05 07:25:40] 2025-06-05 05:25:25,727 | INFO     | sufficient remaining disk space (204523700224 B)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,727 | INFO     | -- intersect: 55097997688.46421
[2025-06-05 07:25:40] 2025-06-05 05:25:25,727 | INFO     | current memory leak: -31.50 B/s (using 82 data points, chi2=0.08)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | ..............................
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | . Timing measurements:
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | . get job = 0 s
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | . initial setup = 1 s
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | . payload setup = 3 s
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | . stage-in = 0 s
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | . payload execution = 6580 s
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | . stage-out = 0 s
[2025-06-05 07:25:40] 2025-06-05 05:25:25,728 | INFO     | . log creation = 0 s
[2025-06-05 07:25:40] 2025-06-05 05:25:25,729 | INFO     | ..............................
[2025-06-05 07:25:40] 2025-06-05 05:25:25,792 | INFO     | 
[2025-06-05 07:25:40] 2025-06-05 05:25:25,792 | INFO     | job summary report
[2025-06-05 07:25:40] 2025-06-05 05:25:25,792 | INFO     | --------------------------------------------------
[2025-06-05 07:25:40] 2025-06-05 05:25:25,792 | INFO     | PanDA job id: 6677786689
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | task id: 45006595
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | errors: (none)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | pilot state: finished 
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | transexitcode: 0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | exeerrorcode: 0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | exeerrordiag: 
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | exitcode: 0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | exitmsg: OK
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | cpuconsumptiontime: 25200 s
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | nevents: 400
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | neventsw: 0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | pid: 375603
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | pgrp: 375603
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | corecount: 4
[2025-06-05 07:25:40] 2025-06-05 05:25:25,793 | INFO     | event service: False
[2025-06-05 07:25:40] 2025-06-05 05:25:25,794 | INFO     | sizes: {0: 2396514, 1: 2397371, 3: 2397577, 12: 2397605, 6586: 2424612, 6587: 2424611, 6588: 2433738, 6589: 2433794, 6595: 2433964}
[2025-06-05 07:25:40] 2025-06-05 05:25:25,794 | INFO     | --------------------------------------------------
[2025-06-05 07:25:40] 2025-06-05 05:25:25,794 | INFO     | 
[2025-06-05 07:25:40] 2025-06-05 05:25:25,794 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-06-05 07:25:40] 2025-06-05 05:25:25,797 | INFO     | size of work directory /var/lib/boinc2/slots/0/PanDA_Pilot-6677786689: 3065068 B (within 2537553920 B limit)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,798 | INFO     | pfn file=/var/lib/boinc2/slots/0/PanDA_Pilot-6677786689/HITS.45006595._040006.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,798 | INFO     | total size of present files: 0 B (workdir size: 3065068 B)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,798 | INFO     | output file size check: skipping output file /var/lib/boinc2/slots/0/PanDA_Pilot-6677786689/HITS.45006595._040006.pool.root.1 since it does not exist
[2025-06-05 07:25:40] 2025-06-05 05:25:25,805 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,805 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,805 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,805 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,805 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,806 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:25:40] 2025-06-05 05:25:25,807 | INFO     | job 6677786689 has completed (purged errors)
[2025-06-05 07:25:40] 2025-06-05 05:25:25,807 | INFO     | overall cleanup function is called
[2025-06-05 07:25:40] 2025-06-05 05:25:25,860 | INFO     | number of running child processes to parent process 375603: 1
[2025-06-05 07:25:40] 2025-06-05 05:25:25,861 | INFO     | maximum number of monitored processes: 6
[2025-06-05 07:25:40] 2025-06-05 05:25:25,861 | INFO     | aborting job monitoring since job object (job id=6677786689) has expired
[2025-06-05 07:25:40] 2025-06-05 05:25:26,517 | INFO     | PID=369141 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 07:25:40] 2025-06-05 05:25:26,517 | INFO     | .. there are 2 such processes running
[2025-06-05 07:25:40] 2025-06-05 05:25:26,814 | INFO     | --- collectZombieJob: --- 10, [375603]
[2025-06-05 07:25:40] 2025-06-05 05:25:26,814 | INFO     | zombie collector waiting for pid 375603
[2025-06-05 07:25:40] 2025-06-05 05:25:26,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:25:40] 2025-06-05 05:25:26,814 | INFO     | collected zombie processes
[2025-06-05 07:25:40] 2025-06-05 05:25:26,814 | INFO     | will attempt to kill all subprocesses of pid=375603
[2025-06-05 07:25:40] 2025-06-05 05:25:26,875 | INFO     | process IDs to be killed: [375603] (in reverse order)
[2025-06-05 07:25:40] 2025-06-05 05:25:26,900 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:25:40] 2025-06-05 05:25:26,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:25:40] 2025-06-05 05:25:26,902 | INFO     | did not find any defunct processes belonging to 375603
[2025-06-05 07:25:40] 2025-06-05 05:25:26,904 | INFO     | did not find any defunct processes belonging to 375603
[2025-06-05 07:25:40] 2025-06-05 05:25:26,904 | INFO     | ready for new job
[2025-06-05 07:25:40] 2025-06-05 05:25:26,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:25:40] 2025-06-05 05:25:26,905 | INFO     | **************************************
[2025-06-05 07:25:40] 2025-06-05 05:25:26,905 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:25:40] 2025-06-05 05:25:26,905 | INFO     | **************************************
[2025-06-05 07:25:40] 2025-06-05 05:25:26,905 | INFO     | 
[2025-06-05 07:25:40] 2025-06-05 05:25:26,906 | INFO     | architecture information:
[2025-06-05 07:25:40] 2025-06-05 05:25:26,906 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:25:40] 2025-06-05 05:25:26,914 | INFO     | cat /etc/os-release:
[2025-06-05 07:25:40] NAME="CentOS Linux"
[2025-06-05 07:25:40] VERSION="7 (Core)"
[2025-06-05 07:25:40] ID="centos"
[2025-06-05 07:25:40] ID_LIKE="rhel fedora"
[2025-06-05 07:25:40] VERSION_ID="7"
[2025-06-05 07:25:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:25:40] ANSI_COLOR="0;31"
[2025-06-05 07:25:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:25:40] HOME_URL="https://www.centos.org/"
[2025-06-05 07:25:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:25:40] 
[2025-06-05 07:25:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:25:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:25:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:25:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:25:40] 
[2025-06-05 07:25:40] 2025-06-05 05:25:26,914 | INFO     | **************************************
[2025-06-05 07:25:40] 2025-06-05 05:25:27,417 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-06-05 07:25:40] 2025-06-05 05:25:27,426 | INFO     | sufficient remaining disk space (204526845952 B)
[2025-06-05 07:25:40] 2025-06-05 05:25:27,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:25:40] 2025-06-05 05:25:27,426 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:25:40] 2025-06-05 05:25:27,426 | INFO     | update_server=False
[2025-06-05 07:25:40] 2025-06-05 05:25:27,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:25:40] 2025-06-05 05:25:27,426 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 07:25:40] 2025-06-05 05:25:27,427 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:25:40] 2025-06-05 05:25:27,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:25:40] 2025-06-05 05:25:27,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:25:40] 2025-06-05 05:25:27,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:25:40] 2025-06-05 05:25:27,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:25:40] 2025-06-05 05:25:27,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:25:40] 2025-06-05 05:25:27,427 | INFO     | aborting loop
[2025-06-05 07:25:40] 2025-06-05 05:25:27,663 | INFO     | all data control threads have been joined
[2025-06-05 07:25:40] 2025-06-05 05:25:28,432 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:28,432 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:28,432 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:28,440 | INFO     | all payload control threads have been joined
[2025-06-05 07:25:40] 2025-06-05 05:25:28,580 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:28,607 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:28,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:28,668 | INFO     | [data] control thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:28,674 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:28,842 | INFO     | all job control threads have been joined
[2025-06-05 07:25:40] 2025-06-05 05:25:29,134 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:29,324 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:29,430 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:29,444 | INFO     | [payload] control thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:29,679 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:29,844 | INFO     | [job] control thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:29,845 | INFO     | [job] validate thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:30,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:25:40] 2025-06-05 05:25:34,794 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:25:40] 2025-06-05 05:25:35,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134463182276416)>', '<ExcThread(monitor, started 134462474024704)>']
[2025-06-05 07:25:40] 2025-06-05 05:25:36,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:25:40] 2025-06-05 05:25:36,466 | INFO     | [monitor] control thread has ended
[2025-06-05 07:25:40] 2025-06-05 05:25:40,492 | INFO     | all workflow threads have been joined
[2025-06-05 07:25:40] 2025-06-05 05:25:40,492 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:25:40] 2025-06-05 05:25:40,492 | INFO     | traces error code: 0
[2025-06-05 07:25:40] 2025-06-05 05:25:40,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:25:40] 2025-06-05 05:25:40,565 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:25:40] 2025-06-05 05:25:40,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:25:40] 2025-06-05 05:25:40,569 [wrapper] pilotpid: 369141
[2025-06-05 07:25:40] 2025-06-05 05:25:40,570 [wrapper] Pilot exit status: 0
[2025-06-05 07:25:40] 2025-06-05 05:25:40,576 [wrapper] pandaids: 6677786689
[2025-06-05 07:25:40] 2025-06-05 05:25:40,593 [wrapper] cleanup supervisor_pilot  415681 369142
[2025-06-05 07:25:40] 2025-06-05 05:25:40,594 [wrapper] Test setup, not cleaning
[2025-06-05 07:25:40] 2025-06-05 05:25:40,596 [wrapper] apfmon messages muted
[2025-06-05 07:25:40] 2025-06-05 05:25:40,598 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:25:40] 2025-06-05 05:25:40,599 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:25:40]  *** Error codes and diagnostics ***
[2025-06-05 07:25:40]     "exeErrorCode": 0,
[2025-06-05 07:25:40]     "exeErrorDiag": "",
[2025-06-05 07:25:40]     "pilotErrorCode": 0,
[2025-06-05 07:25:40]     "pilotErrorDiag": "",
[2025-06-05 07:25:40]  *** Listing of results directory ***
[2025-06-05 07:25:40] insgesamt 386156
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc    495897  3. Jun 18:58 pilot3.tar.gz
[2025-06-05 07:25:40] -rwx------ 1 boinc boinc     37140  3. Jun 19:12 runpilot2-wrapper.sh
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc      5111  3. Jun 19:12 queuedata.json
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc       100  5. Jun 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:25:40] -rwxr-xr-x 1 boinc boinc      7986  5. Jun 05:35 run_atlas
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc       105  5. Jun 05:35 job.xml
[2025-06-05 07:25:40] -rw-r--r-- 2 boinc boinc 215599809  5. Jun 05:35 EVNT.45006593._001604.pool.root.1
[2025-06-05 07:25:40] drwxrwx--x 2 boinc boinc      4096  5. Jun 05:35 shared
[2025-06-05 07:25:40] -rw-r--r-- 2 boinc boinc    508879  5. Jun 05:35 input.tar.gz
[2025-06-05 07:25:40] -rw-r--r-- 2 boinc boinc     15093  5. Jun 05:35 start_atlas.sh
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc         0  5. Jun 05:35 boinc_lockfile
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc      2525  5. Jun 05:35 pandaJob.out
[2025-06-05 07:25:40] -rw------- 1 boinc boinc    987109  5. Jun 05:35 agis_schedconf.cvmfs.json
[2025-06-05 07:25:40] -rw------- 1 boinc boinc   1598969  5. Jun 05:35 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:25:40] drwx------ 4 boinc boinc      4096  5. Jun 05:35 pilot3
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc      9816  5. Jun 07:04 init_data.xml
[2025-06-05 07:25:40] -rw------- 1 boinc boinc 174157443  5. Jun 07:24 HITS.45006595._040006.pool.root.1
[2025-06-05 07:25:40] -rw------- 1 boinc boinc        95  5. Jun 07:25 pilot_heartbeat.json
[2025-06-05 07:25:40] -rw------- 1 boinc boinc      1016  5. Jun 07:25 memory_monitor_summary.json
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc       529  5. Jun 07:25 boinc_task_state.xml
[2025-06-05 07:25:40] -rw------- 1 boinc boinc    272240  5. Jun 07:25 log.45006595._040006.job.log.tgz.1
[2025-06-05 07:25:40] -rw------- 1 boinc boinc      7654  5. Jun 07:25 heartbeat.json
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc      8192  5. Jun 07:25 boinc_mmap_file
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc        27  5. Jun 07:25 wrapper_checkpoint.txt
[2025-06-05 07:25:40] -rw------- 1 boinc boinc      4478  5. Jun 07:25 pilotlog.txt
[2025-06-05 07:25:40] -rw------- 1 boinc boinc    645298  5. Jun 07:25 log.45006595._040006.job.log.1
[2025-06-05 07:25:40] -rw------- 1 boinc boinc       357  5. Jun 07:25 output.list
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc       620  5. Jun 07:25 runtime_log
[2025-06-05 07:25:40] -rw------- 1 boinc boinc    931840  5. Jun 07:25 result.tar.gz
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc      8641  5. Jun 07:25 runtime_log.err
[2025-06-05 07:25:40] -rw------- 1 boinc boinc       643  5. Jun 07:25 JINKDmHNkg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvOZKDmwHRvNo.diag
[2025-06-05 07:25:40] -rw-r--r-- 1 boinc boinc     21059  5. Jun 07:25 stderr.txt
[2025-06-05 07:25:40] HITS file was successfully produced:
[2025-06-05 07:25:40] -rw------- 1 boinc boinc 174157443  5. Jun 07:24 shared/HITS.pool.root.1
[2025-06-05 07:25:40]  *** Contents of shared directory: ***
[2025-06-05 07:25:40] insgesamt 382060
[2025-06-05 07:25:40] -rw-r--r-- 2 boinc boinc 215599809  5. Jun 05:35 ATLAS.root_0
[2025-06-05 07:25:40] -rw-r--r-- 2 boinc boinc    508879  5. Jun 05:35 input.tar.gz
[2025-06-05 07:25:40] -rw-r--r-- 2 boinc boinc     15093  5. Jun 05:35 start_atlas.sh
[2025-06-05 07:25:40] -rw------- 1 boinc boinc 174157443  5. Jun 07:24 HITS.pool.root.1
[2025-06-05 07:25:40] -rw------- 1 boinc boinc    931840  5. Jun 07:25 result.tar.gz
07:25:41 (365528): run_atlas exited; CPU time 25263.854328
07:25:41 (365528): called boinc_finish(0)

</stderr_txt>
]]>

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