Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:18:13 (26828): wrapper (7.7.26015): starting
10:18:13 (26828): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:18:13] Arguments: --nthreads 8
[2025-06-04 10:18:13] Threads: 8
[2025-06-04 10:18:13] Checking for CVMFS
[2025-06-04 10:18:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:18:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:18:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:18:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:18:15] 2.11.2.0 7179 33077 89620 146772 3 52 16337122 25165825 4135 130560 0 18187769 99.843 18509922 2461 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:18:15] CVMFS is ok
[2025-06-04 10:18:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:18:15] Checking for apptainer binary...
[2025-06-04 10:18:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:18:15] Running /usr/bin/apptainer --version
[2025-06-04 10:18:15] apptainer version 1.3.2-1.el7
[2025-06-04 10:18:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:18:25] cg-vwn286.simple-grid.lan
[2025-06-04 10:18:25] apptainer works
[2025-06-04 10:18:25] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:18:25] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:18:25] Starting ATLAS job with PandaID=6677919794
[2025-06-04 10:18:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:55:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:55:44] 2025-06-04 12:26:28,091 | INFO     | extracted standard info from prmon json
[2025-06-04 14:55:44] 2025-06-04 12:26:28,091 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:55:44] 2025-06-04 12:26:28,091 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:55:44] 2025-06-04 12:26:28,091 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:55:44] 2025-06-04 12:26:28,091 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:55:44] 2025-06-04 12:26:28,096 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:55:44] 2025-06-04 12:26:28,097 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,100 | INFO     | sum of deviations: 48525383337.499985
[2025-06-04 14:55:44] 2025-06-04 12:26:28,101 | INFO     | mean x: 1749032801.5
[2025-06-04 14:55:44] 2025-06-04 12:26:28,101 | INFO     | mean y: 2449621.0129310344
[2025-06-04 14:55:44] 2025-06-04 12:26:28,101 | INFO     | -- intersect: -21917150116.06914
[2025-06-04 14:55:44] 2025-06-04 12:26:28,101 | INFO     | intersect: -21917150116.06914
[2025-06-04 14:55:44] 2025-06-04 12:26:28,102 | INFO     | chi2: 6.943584452320721
[2025-06-04 14:55:44] 2025-06-04 12:26:28,102 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,104 | INFO     | sum of deviations: 62904856698.99999
[2025-06-04 14:55:44] 2025-06-04 12:26:28,104 | INFO     | mean x: 1749032649.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,104 | INFO     | mean y: 2458404.2555066077
[2025-06-04 14:55:44] 2025-06-04 12:26:28,105 | INFO     | -- intersect: -30331879939.95519
[2025-06-04 14:55:44] 2025-06-04 12:26:28,105 | INFO     | intersect: -30331879939.95519
[2025-06-04 14:55:44] 2025-06-04 12:26:28,105 | INFO     | chi2: 6.226167350919411
[2025-06-04 14:55:44] 2025-06-04 12:26:28,105 | INFO     | current chi2=6.226167350919411 (change=10.332085773962623 %)
[2025-06-04 14:55:44] 2025-06-04 12:26:28,105 | INFO     | right removable region: 226
[2025-06-04 14:55:44] 2025-06-04 12:26:28,106 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,108 | INFO     | sum of deviations: -31725915963.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,108 | INFO     | mean x: 1749032954.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,108 | INFO     | mean y: 2499530.7136563878
[2025-06-04 14:55:44] 2025-06-04 12:26:28,108 | INFO     | -- intersect: 15301554125.644533
[2025-06-04 14:55:44] 2025-06-04 12:26:28,108 | INFO     | intersect: 15301554125.644533
[2025-06-04 14:55:44] 2025-06-04 12:26:28,109 | INFO     | chi2: 2.1284988503947173
[2025-06-04 14:55:44] 2025-06-04 12:26:28,109 | INFO     | current chi2=2.1284988503947173 (change=69.34582037547885 %)
[2025-06-04 14:55:44] 2025-06-04 12:26:28,109 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 14:55:44] 2025-06-04 12:26:28,111 | INFO     | sum of deviations: -66600892632.00001
[2025-06-04 14:55:44] 2025-06-04 12:26:28,111 | INFO     | mean x: 1749033106.5
[2025-06-04 14:55:44] 2025-06-04 12:26:28,112 | INFO     | mean y: 2522082.936936937
[2025-06-04 14:55:44] 2025-06-04 12:26:28,112 | INFO     | -- intersect: 34338509794.17203
[2025-06-04 14:55:44] 2025-06-04 12:26:28,112 | INFO     | intersect: 34338509794.17203
[2025-06-04 14:55:44] 2025-06-04 12:26:28,112 | INFO     | chi2: 1.019999958016079
[2025-06-04 14:55:44] 2025-06-04 12:26:28,113 | INFO     | current chi2=1.019999958016079 (change=52.07890491334181 %)
[2025-06-04 14:55:44] 2025-06-04 12:26:28,113 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,115 | INFO     | sum of deviations: -62883946082.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,115 | INFO     | mean x: 1749033259.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,115 | INFO     | mean y: 2519525.6958525344
[2025-06-04 14:55:44] 2025-06-04 12:26:28,115 | INFO     | -- intersect: 34715304013.67109
[2025-06-04 14:55:44] 2025-06-04 12:26:28,115 | INFO     | intersect: 34715304013.67109
[2025-06-04 14:55:44] 2025-06-04 12:26:28,116 | INFO     | chi2: 1.01104041697468
[2025-06-04 14:55:44] 2025-06-04 12:26:28,116 | INFO     | current chi2=1.01104041697468 (change=0.8783864127627463 %)
[2025-06-04 14:55:44] 2025-06-04 12:26:28,116 | INFO     | left removable region: 30
[2025-06-04 14:55:44] 2025-06-04 12:26:28,116 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,118 | INFO     | sum of deviations: -25556437451.000004
[2025-06-04 14:55:44] 2025-06-04 12:26:28,118 | INFO     | mean x: 1749033533.5
[2025-06-04 14:55:44] 2025-06-04 12:26:28,118 | INFO     | mean y: 2513811.775510204
[2025-06-04 14:55:44] 2025-06-04 12:26:28,118 | INFO     | -- intersect: 19147855278.888393
[2025-06-04 14:55:44] 2025-06-04 12:26:28,118 | INFO     | intersect: 19147855278.888393
[2025-06-04 14:55:44] 2025-06-04 12:26:28,119 | INFO     | chi2: 0.16057316470416572
[2025-06-04 14:55:44] 2025-06-04 12:26:28,119 | INFO     | -- intersect: 19147855278.888393
[2025-06-04 14:55:44] 2025-06-04 12:26:28,119 | INFO     | current memory leak: -10.95 B/s (using 196 data points, chi2=0.16)
[2025-06-04 14:55:44] 2025-06-04 12:26:28,120 | INFO     | ..............................
[2025-06-04 14:55:44] 2025-06-04 12:26:28,120 | INFO     | . Timing measurements:
[2025-06-04 14:55:44] 2025-06-04 12:26:28,120 | INFO     | . get job = 0 s
[2025-06-04 14:55:44] 2025-06-04 12:26:28,120 | INFO     | . initial setup = 8 s
[2025-06-04 14:55:44] 2025-06-04 12:26:28,121 | INFO     | . payload setup = 146 s
[2025-06-04 14:55:44] 2025-06-04 12:26:28,121 | INFO     | . stage-in = 0 s
[2025-06-04 14:55:44] 2025-06-04 12:26:28,121 | INFO     | . payload execution = 14279 s
[2025-06-04 14:55:44] 2025-06-04 12:26:28,121 | INFO     | . stage-out = 3 s
[2025-06-04 14:55:44] 2025-06-04 12:26:28,121 | INFO     | . log creation = 0 s
[2025-06-04 14:55:44] 2025-06-04 12:26:28,121 | INFO     | ..............................
[2025-06-04 14:55:44] 2025-06-04 12:26:28,255 | INFO     | 
[2025-06-04 14:55:44] 2025-06-04 12:26:28,256 | INFO     | job summary report
[2025-06-04 14:55:44] 2025-06-04 12:26:28,256 | INFO     | --------------------------------------------------
[2025-06-04 14:55:44] 2025-06-04 12:26:28,256 | INFO     | PanDA job id: 6677919794
[2025-06-04 14:55:44] 2025-06-04 12:26:28,256 | INFO     | task id: 45006595
[2025-06-04 14:55:44] 2025-06-04 12:26:28,256 | INFO     | errors: (none)
[2025-06-04 14:55:44] 2025-06-04 12:26:28,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:55:44] 2025-06-04 12:26:28,256 | INFO     | pilot state: finished 
[2025-06-04 14:55:44] 2025-06-04 12:26:28,256 | INFO     | transexitcode: 0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | exeerrorcode: 0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | exeerrordiag: 
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | exitcode: 0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | exitmsg: OK
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | cpuconsumptiontime: 51352 s
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | nevents: 400
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | neventsw: 0
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | pid: 11053
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | pgrp: 11053
[2025-06-04 14:55:44] 2025-06-04 12:26:28,257 | INFO     | corecount: 8
[2025-06-04 14:55:44] 2025-06-04 12:26:28,258 | INFO     | event service: False
[2025-06-04 14:55:44] 2025-06-04 12:26:28,258 | INFO     | sizes: {0: 2405013, 1: 2405212, 2: 2405212, 12: 2405240, 23: 2405268, 34: 2405296, 45: 2405452, 55: 2405480, 66: 2405508, 77: 2405536, 88: 2405592, 89: 2406106, 98
[2025-06-04 14:55:44] 2025-06-04 12:26:28,258 | INFO     | --------------------------------------------------
[2025-06-04 14:55:44] 2025-06-04 12:26:28,258 | INFO     | 
[2025-06-04 14:55:44] 2025-06-04 12:26:28,258 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 14:55:44] 2025-06-04 12:26:28,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:55:44] 2025-06-04 12:26:28,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:55:44] 2025-06-04 12:26:28,318 | INFO     | job 6677919794 has completed (purged errors)
[2025-06-04 14:55:44] 2025-06-04 12:26:28,318 | INFO     | overall cleanup function is called
[2025-06-04 14:55:44] 2025-06-04 12:26:29,327 | INFO     | --- collectZombieJob: --- 10, [11053]
[2025-06-04 14:55:44] 2025-06-04 12:26:29,328 | INFO     | zombie collector waiting for pid 11053
[2025-06-04 14:55:44] 2025-06-04 12:26:29,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:55:44] 2025-06-04 12:26:29,328 | INFO     | collected zombie processes
[2025-06-04 14:55:44] 2025-06-04 12:26:29,328 | INFO     | will attempt to kill all subprocesses of pid=11053
[2025-06-04 14:55:44] 2025-06-04 12:26:29,429 | INFO     | process IDs to be killed: [11053] (in reverse order)
[2025-06-04 14:55:44] 2025-06-04 12:26:29,848 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:55:44] 2025-06-04 12:26:29,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:55:44] 2025-06-04 12:26:29,852 | INFO     | did not find any defunct processes belonging to 11053
[2025-06-04 14:55:44] 2025-06-04 12:26:29,855 | INFO     | did not find any defunct processes belonging to 11053
[2025-06-04 14:55:44] 2025-06-04 12:26:29,856 | INFO     | ready for new job
[2025-06-04 14:55:44] 2025-06-04 12:26:29,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:55:44] 2025-06-04 12:26:29,861 | INFO     | **************************************
[2025-06-04 14:55:44] 2025-06-04 12:26:29,862 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:55:44] 2025-06-04 12:26:29,862 | INFO     | **************************************
[2025-06-04 14:55:44] 2025-06-04 12:26:29,862 | INFO     | 
[2025-06-04 14:55:44] 2025-06-04 12:26:29,863 | INFO     | pilot is running in a VM
[2025-06-04 14:55:44] 2025-06-04 12:26:29,863 | INFO     | architecture information:
[2025-06-04 14:55:44] 2025-06-04 12:26:29,872 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:55:44] 2025-06-04 12:26:30,084 | INFO     | cat /etc/os-release:
[2025-06-04 14:55:44] NAME="CentOS Linux"
[2025-06-04 14:55:44] VERSION="7 (Core)"
[2025-06-04 14:55:44] ID="centos"
[2025-06-04 14:55:44] ID_LIKE="rhel fedora"
[2025-06-04 14:55:44] VERSION_ID="7"
[2025-06-04 14:55:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:55:44] ANSI_COLOR="0;31"
[2025-06-04 14:55:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:55:44] HOME_URL="https://www.centos.org/"
[2025-06-04 14:55:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:55:44] 
[2025-06-04 14:55:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:55:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:55:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:55:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:55:44] 
[2025-06-04 14:55:44] 2025-06-04 12:26:30,084 | INFO     | **************************************
[2025-06-04 14:55:44] 2025-06-04 12:26:30,588 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 14:55:44] 2025-06-04 12:26:30,916 | INFO     | sufficient remaining disk space (496488153088 B)
[2025-06-04 14:55:44] 2025-06-04 12:26:30,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:55:44] 2025-06-04 12:26:30,917 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:55:44] 2025-06-04 12:26:30,917 | INFO     | update_server=False
[2025-06-04 14:55:44] 2025-06-04 12:26:30,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:55:44] 2025-06-04 12:26:30,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:55:44] 2025-06-04 12:26:30,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:55:44] 2025-06-04 12:26:30,918 | INFO     | aborting loop
[2025-06-04 14:55:44] 2025-06-04 12:26:31,213 | INFO     | all payload control threads have been joined
[2025-06-04 14:55:44] 2025-06-04 12:26:31,436 | INFO     | all job control threads have been joined
[2025-06-04 14:55:44] 2025-06-04 12:26:31,705 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:55:44] 2025-06-04 12:26:31,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:55:44] 2025-06-04 12:26:31,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:55:44] 2025-06-04 12:26:31,901 | INFO     | all data control threads have been joined
[2025-06-04 14:55:44] 2025-06-04 12:26:31,923 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:31,924 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:31,990 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:32,099 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:32,220 | INFO     | [payload] control thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:32,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:55:44] 2025-06-04 12:26:32,443 | INFO     | [job] control thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:32,479 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:32,602 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:32,622 | INFO     | [job] validate thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:32,908 | INFO     | [data] control thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:32,946 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:33,088 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:33,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:55:44] 2025-06-04 12:26:34,275 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:34,292 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:34,927 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:41,574 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:55:44] 2025-06-04 12:26:42,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:55:44] 2025-06-04 12:26:43,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773354194752)>', '<ExcThread(monitor, started 139772748076800)>']
[2025-06-04 14:55:44] 2025-06-04 12:26:43,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:55:44] 2025-06-04 12:26:43,777 | INFO     | [monitor] control thread has ended
[2025-06-04 14:55:44] 2025-06-04 12:26:48,063 | INFO     | all workflow threads have been joined
[2025-06-04 14:55:44] 2025-06-04 12:26:48,064 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:55:44] 2025-06-04 12:26:48,064 | INFO     | traces error code: 0
[2025-06-04 14:55:44] 2025-06-04 12:26:48,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:55:44] 2025-06-04 12:26:48,420 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:55:44] 2025-06-04 12:26:48,532 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:55:44] 2025-06-04 12:26:48,627 [wrapper] pilotpid: 343
[2025-06-04 14:55:44] 2025-06-04 12:26:48,684 [wrapper] Pilot exit status: 0
[2025-06-04 14:55:44] 2025-06-04 12:26:49,156 [wrapper] pandaids: 6677919794
[2025-06-04 14:55:44] 2025-06-04 12:26:50,110 [wrapper] cleanup supervisor_pilot 28988 344
[2025-06-04 14:55:44] 2025-06-04 12:26:50,168 [wrapper] Test setup, not cleaning
[2025-06-04 14:55:44] 2025-06-04 12:26:50,240 [wrapper] apfmon messages muted
[2025-06-04 14:55:44] 2025-06-04 12:26:50,283 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:55:44] 2025-06-04 12:26:50,350 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:55:44]  *** Error codes and diagnostics ***
[2025-06-04 14:55:44]     "exeErrorCode": 0,
[2025-06-04 14:55:44]     "exeErrorDiag": "",
[2025-06-04 14:55:44]     "pilotErrorCode": 0,
[2025-06-04 14:55:44]     "pilotErrorDiag": "",
[2025-06-04 14:55:44]  *** Listing of results directory ***
[2025-06-04 14:55:44] total 391128
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:59 queuedata.json
[2025-06-04 14:55:44] -rwx------. 1 boinc boinc     37140 Jun  3 19:59 runpilot2-wrapper.sh
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:55:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:18 run_atlas
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:18 job.xml
[2025-06-04 14:55:44] -rw-r--r--. 2 boinc boinc 217292514 Jun  4 10:18 EVNT.45006593._001672.pool.root.1
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc      6391 Jun  4 10:18 init_data.xml
[2025-06-04 14:55:44] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:18 start_atlas.sh
[2025-06-04 14:55:44] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:18 shared
[2025-06-04 14:55:44] -rw-r--r--. 2 boinc boinc    508886 Jun  4 10:18 input.tar.gz
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:18 boinc_lockfile
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:18 pandaJob.out
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc    986745 Jun  4 10:21 agis_schedconf.cvmfs.json
[2025-06-04 14:55:44] drwx------. 4 boinc boinc      4096 Jun  4 10:21 pilot3
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc 176088732 Jun  4 14:23 HITS.45006595._041720.pool.root.1
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:24 boinc_task_state.xml
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc      1017 Jun  4 14:24 memory_monitor_summary.json
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc   1598969 Jun  4 14:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc    402385 Jun  4 14:25 log.45006595._041720.job.log.tgz.1
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc        95 Jun  4 14:25 pilot_heartbeat.json
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc      7691 Jun  4 14:26 heartbeat.json
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc      4488 Jun  4 14:26 pilotlog.txt
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc   1253649 Jun  4 14:26 log.45006595._041720.job.log.1
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc       357 Jun  4 14:26 output.list
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:26 runtime_log
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc   1679360 Jun  4 14:26 result.tar.gz
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc      8659 Jun  4 14:26 runtime_log.err
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc       657 Jun  4 14:26 MemMDmS6kg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMWZKDmxKMtWm.diag
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:55 boinc_mmap_file
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:55 wrapper_checkpoint.txt
[2025-06-04 14:55:44] -rw-r--r--. 1 boinc boinc     20453 Jun  4 14:55 stderr.txt
[2025-06-04 14:55:44] HITS file was successfully produced:
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc 176088732 Jun  4 14:23 shared/HITS.pool.root.1
[2025-06-04 14:55:44]  *** Contents of shared directory: ***
[2025-06-04 14:55:44] total 386320
[2025-06-04 14:55:44] -rw-r--r--. 2 boinc boinc 217292514 Jun  4 10:18 ATLAS.root_0
[2025-06-04 14:55:44] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:18 start_atlas.sh
[2025-06-04 14:55:44] -rw-r--r--. 2 boinc boinc    508886 Jun  4 10:18 input.tar.gz
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc 176088732 Jun  4 14:23 HITS.pool.root.1
[2025-06-04 14:55:44] -rw-------. 1 boinc boinc   1679360 Jun  4 14:26 result.tar.gz
14:55:46 (26828): run_atlas exited; CPU time 51553.625722
14:55:46 (26828): called boinc_finish(0)

</stderr_txt>
]]>

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