Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:38:42 (2888450): wrapper (7.7.26015): starting
00:38:42 (2888450): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 00:38:42] Arguments: --nthreads 4
[2025-06-05 00:38:42] Threads: 4
[2025-06-05 00:38:42] Checking for CVMFS
[2025-06-05 00:38:42] No cvmfs_config command found, will try listing directly
[2025-06-05 00:38:42] CVMFS is ok
[2025-06-05 00:38:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:38:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:38:42] Further information can be found at the LHC@home message board.
[2025-06-05 00:38:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:38:42] Checking for apptainer binary...
[2025-06-05 00:38:42] which: no apptainer in ((null))
[2025-06-05 00:38:42] apptainer is not installed, using version from CVMFS
[2025-06-05 00:38:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:38:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-06-05 00:38:42] apptainer works
[2025-06-05 00:38:42] Set ATHENA_PROC_NUMBER=4
[2025-06-05 00:38:42] Set ATHENA_CORE_NUMBER=4
[2025-06-05 00:38:42] Starting ATLAS job with PandaID=6677977868
[2025-06-05 00:38:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:48:03]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:48:03] 2025-06-05 01:47:22,416 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 03:48:03] 2025-06-05 01:47:23,093 | INFO     | monitor loop #834: job 0:6677977868 is in state 'finished'
[2025-06-05 03:48:03] 2025-06-05 01:47:23,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:48:03] 2025-06-05 01:47:24,661 | INFO     | PID=2892018 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 03:48:03] 2025-06-05 01:47:24,661 | INFO     | .. there are 5 such processes running
[2025-06-05 03:48:03] 2025-06-05 01:47:25,599 | INFO     | monitor loop #835: job 0:6677977868 is in state 'finished'
[2025-06-05 03:48:03] 2025-06-05 01:47:25,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:48:03] 2025-06-05 01:47:26,857 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 03:48:03] 2025-06-05 01:47:26,857 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6677977868/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:48:03] 2025-06-05 01:47:26,858 | INFO     | extracted standard info from prmon json
[2025-06-05 03:48:03] 2025-06-05 01:47:26,858 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:48:03] 2025-06-05 01:47:26,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:48:03] 2025-06-05 01:47:26,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:48:03] 2025-06-05 01:47:26,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:48:03] 2025-06-05 01:47:26,863 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:48:03] 2025-06-05 01:47:26,863 | INFO     | sum of square deviations: 1963274020.0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,865 | INFO     | sum of deviations: -25203259467.999996
[2025-06-05 03:48:03] 2025-06-05 01:47:26,865 | INFO     | mean x: 1749082367.0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,865 | INFO     | mean y: 2373656.372972973
[2025-06-05 03:48:03] 2025-06-05 01:47:26,865 | INFO     | -- intersect: 22455977319.09785
[2025-06-05 03:48:03] 2025-06-05 01:47:26,865 | INFO     | intersect: 22455977319.09785
[2025-06-05 03:48:03] 2025-06-05 01:47:26,866 | INFO     | chi2: 1.9016538859163585
[2025-06-05 03:48:03] 2025-06-05 01:47:26,866 | INFO     | sum of square deviations: 1808350185.0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,867 | INFO     | sum of deviations: -24198677551.99999
[2025-06-05 03:48:03] 2025-06-05 01:47:26,867 | INFO     | mean x: 1749082214.5
[2025-06-05 03:48:03] 2025-06-05 01:47:26,868 | INFO     | mean y: 2374645.4777777777
[2025-06-05 03:48:03] 2025-06-05 01:47:26,868 | INFO     | -- intersect: 23407949999.02778
[2025-06-05 03:48:03] 2025-06-05 01:47:26,868 | INFO     | intersect: 23407949999.02778
[2025-06-05 03:48:03] 2025-06-05 01:47:26,868 | INFO     | chi2: 1.8976751499626945
[2025-06-05 03:48:03] 2025-06-05 01:47:26,868 | INFO     | current chi2=1.8976751499626945 (change=0.2092250321223305 %)
[2025-06-05 03:48:03] 2025-06-05 01:47:26,868 | INFO     | right removable region: 179
[2025-06-05 03:48:03] 2025-06-05 01:47:26,869 | INFO     | sum of square deviations: 1808350185.0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,870 | INFO     | sum of deviations: -51024734599.000015
[2025-06-05 03:48:03] 2025-06-05 01:47:26,870 | INFO     | mean x: 1749082519.5
[2025-06-05 03:48:03] 2025-06-05 01:47:26,870 | INFO     | mean y: 2398737.2
[2025-06-05 03:48:03] 2025-06-05 01:47:26,870 | INFO     | -- intersect: 49354826209.22626
[2025-06-05 03:48:03] 2025-06-05 01:47:26,871 | INFO     | intersect: 49354826209.22626
[2025-06-05 03:48:03] 2025-06-05 01:47:26,871 | INFO     | chi2: 0.4027975185388984
[2025-06-05 03:48:03] 2025-06-05 01:47:26,871 | INFO     | current chi2=0.4027975185388984 (change=78.81856832507664 %)
[2025-06-05 03:48:03] 2025-06-05 01:47:26,872 | INFO     | sum of square deviations: 1661798600.0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,873 | INFO     | sum of deviations: -43354905149.99999
[2025-06-05 03:48:03] 2025-06-05 01:47:26,873 | INFO     | mean x: 1749082672.0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,873 | INFO     | mean y: 2390733.302857143
[2025-06-05 03:48:03] 2025-06-05 01:47:26,873 | INFO     | -- intersect: 45634462720.88821
[2025-06-05 03:48:03] 2025-06-05 01:47:26,873 | INFO     | intersect: 45634462720.88821
[2025-06-05 03:48:03] 2025-06-05 01:47:26,874 | INFO     | chi2: 0.3867028787946478
[2025-06-05 03:48:03] 2025-06-05 01:47:26,874 | INFO     | current chi2=0.3867028787946478 (change=3.9957147210419826 %)
[2025-06-05 03:48:03] 2025-06-05 01:47:26,874 | INFO     | left removable region: 20
[2025-06-05 03:48:03] 2025-06-05 01:47:26,874 | INFO     | sum of square deviations: 1246386160.0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,875 | INFO     | sum of deviations: -23988224807.000004
[2025-06-05 03:48:03] 2025-06-05 01:47:26,875 | INFO     | mean x: 1749082794.0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,875 | INFO     | mean y: 2371019.3836477986
[2025-06-05 03:48:03] 2025-06-05 01:47:26,876 | INFO     | -- intersect: 33665606872.811028
[2025-06-05 03:48:03] 2025-06-05 01:47:26,876 | INFO     | intersect: 33665606872.811028
[2025-06-05 03:48:03] 2025-06-05 01:47:26,876 | INFO     | chi2: 0.2961349545100112
[2025-06-05 03:48:03] 2025-06-05 01:47:26,876 | INFO     | -- intersect: 33665606872.811028
[2025-06-05 03:48:03] 2025-06-05 01:47:26,876 | INFO     | current memory leak: -19.25 B/s (using 159 data points, chi2=0.30)
[2025-06-05 03:48:03] 2025-06-05 01:47:26,877 | INFO     | ..............................
[2025-06-05 03:48:03] 2025-06-05 01:47:26,877 | INFO     | . Timing measurements:
[2025-06-05 03:48:03] 2025-06-05 01:47:26,877 | INFO     | . get job = 0 s
[2025-06-05 03:48:03] 2025-06-05 01:47:26,877 | INFO     | . initial setup = 1 s
[2025-06-05 03:48:03] 2025-06-05 01:47:26,878 | INFO     | . payload setup = 5 s
[2025-06-05 03:48:03] 2025-06-05 01:47:26,878 | INFO     | . stage-in = 0 s
[2025-06-05 03:48:03] 2025-06-05 01:47:26,878 | INFO     | . payload execution = 11284 s
[2025-06-05 03:48:03] 2025-06-05 01:47:26,878 | INFO     | . stage-out = 1 s
[2025-06-05 03:48:03] 2025-06-05 01:47:26,878 | INFO     | . log creation = 0 s
[2025-06-05 03:48:03] 2025-06-05 01:47:26,878 | INFO     | ..............................
[2025-06-05 03:48:03] 2025-06-05 01:47:26,990 | INFO     | 
[2025-06-05 03:48:03] 2025-06-05 01:47:26,990 | INFO     | job summary report
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | --------------------------------------------------
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | PanDA job id: 6677977868
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | task id: 45006595
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | errors: (none)
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | pilot state: finished 
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | transexitcode: 0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | exeerrorcode: 0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | exeerrordiag: 
[2025-06-05 03:48:03] 2025-06-05 01:47:26,991 | INFO     | exitcode: 0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | exitmsg: OK
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | cpuconsumptiontime: 43362 s
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | nevents: 400
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | neventsw: 0
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | pid: 2898873
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | pgrp: 2898873
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | corecount: 4
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | event service: False
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | sizes: {0: 2397351, 4: 2397557, 11: 2397585, 11294: 2426651, 11295: 2426650, 11296: 2435669, 11297: 2435853, 11302: 2436023}
[2025-06-05 03:48:03] 2025-06-05 01:47:26,992 | INFO     | --------------------------------------------------
[2025-06-05 03:48:03] 2025-06-05 01:47:26,993 | INFO     | 
[2025-06-05 03:48:03] 2025-06-05 01:47:26,993 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-06-05 03:48:03] 2025-06-05 01:47:27,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,013 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,013 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,013 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,013 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,014 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,014 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:48:03] 2025-06-05 01:47:27,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:48:03] 2025-06-05 01:47:27,014 | INFO     | job 6677977868 has completed (purged errors)
[2025-06-05 03:48:03] 2025-06-05 01:47:27,014 | INFO     | overall cleanup function is called
[2025-06-05 03:48:03] 2025-06-05 01:47:28,021 | INFO     | --- collectZombieJob: --- 10, [2898873]
[2025-06-05 03:48:03] 2025-06-05 01:47:28,021 | INFO     | zombie collector waiting for pid 2898873
[2025-06-05 03:48:03] 2025-06-05 01:47:28,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:48:03] 2025-06-05 01:47:28,021 | INFO     | collected zombie processes
[2025-06-05 03:48:03] 2025-06-05 01:47:28,022 | INFO     | will attempt to kill all subprocesses of pid=2898873
[2025-06-05 03:48:03] 2025-06-05 01:47:28,259 | INFO     | process IDs to be killed: [2898873] (in reverse order)
[2025-06-05 03:48:03] 2025-06-05 01:47:28,328 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:48:03] 2025-06-05 01:47:28,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:48:03] 2025-06-05 01:47:28,336 | INFO     | did not find any defunct processes belonging to 2898873
[2025-06-05 03:48:03] 2025-06-05 01:47:28,342 | INFO     | did not find any defunct processes belonging to 2898873
[2025-06-05 03:48:03] 2025-06-05 01:47:28,342 | INFO     | ready for new job
[2025-06-05 03:48:03] 2025-06-05 01:47:28,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:48:03] 2025-06-05 01:47:28,345 | INFO     | **************************************
[2025-06-05 03:48:03] 2025-06-05 01:47:28,345 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:48:03] 2025-06-05 01:47:28,345 | INFO     | **************************************
[2025-06-05 03:48:03] 2025-06-05 01:47:28,345 | INFO     | 
[2025-06-05 03:48:03] 2025-06-05 01:47:28,347 | INFO     | architecture information:
[2025-06-05 03:48:03] 2025-06-05 01:47:28,347 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:48:03] 2025-06-05 01:47:28,361 | INFO     | cat /etc/os-release:
[2025-06-05 03:48:03] NAME="CentOS Linux"
[2025-06-05 03:48:03] VERSION="7 (Core)"
[2025-06-05 03:48:03] ID="centos"
[2025-06-05 03:48:03] ID_LIKE="rhel fedora"
[2025-06-05 03:48:03] VERSION_ID="7"
[2025-06-05 03:48:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:48:03] ANSI_COLOR="0;31"
[2025-06-05 03:48:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:48:03] HOME_URL="https://www.centos.org/"
[2025-06-05 03:48:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:48:03] 
[2025-06-05 03:48:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:48:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:48:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:48:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:48:03] 
[2025-06-05 03:48:03] 2025-06-05 01:47:28,362 | INFO     | **************************************
[2025-06-05 03:48:03] 2025-06-05 01:47:28,864 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-06-05 03:48:03] 2025-06-05 01:47:28,884 | INFO     | sufficient remaining disk space (3468390563840 B)
[2025-06-05 03:48:03] 2025-06-05 01:47:28,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:48:03] 2025-06-05 01:47:28,884 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:48:03] 2025-06-05 01:47:28,884 | INFO     | update_server=False
[2025-06-05 03:48:03] 2025-06-05 01:47:28,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:48:03] 2025-06-05 01:47:28,885 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:48:03] 2025-06-05 01:47:28,885 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:48:03] 2025-06-05 01:47:28,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:48:03] 2025-06-05 01:47:28,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:48:03] 2025-06-05 01:47:28,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:48:03] 2025-06-05 01:47:29,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:48:03] 2025-06-05 01:47:29,108 | INFO     | aborting loop
[2025-06-05 03:48:03] 2025-06-05 01:47:29,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:48:03] 2025-06-05 01:47:29,372 | INFO     | all payload control threads have been joined
[2025-06-05 03:48:03] 2025-06-05 01:47:29,833 | INFO     | all data control threads have been joined
[2025-06-05 03:48:03] 2025-06-05 01:47:29,890 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:29,891 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:29,974 | INFO     | all job control threads have been joined
[2025-06-05 03:48:03] 2025-06-05 01:47:29,975 | INFO     | [job] validate thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,081 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,113 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,377 | INFO     | [payload] control thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,587 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,667 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,781 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,839 | INFO     | [data] control thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,924 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:30,979 | INFO     | [job] control thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:31,095 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:31,151 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:32,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:48:03] 2025-06-05 01:47:36,367 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:48:03] 2025-06-05 01:47:38,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22393190500160)>', '<ExcThread(monitor, started 22392615200512)>']
[2025-06-05 03:48:03] 2025-06-05 01:47:38,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:48:03] 2025-06-05 01:47:38,933 | INFO     | [monitor] control thread has ended
[2025-06-05 03:48:03] 2025-06-05 01:47:43,109 | INFO     | all workflow threads have been joined
[2025-06-05 03:48:03] 2025-06-05 01:47:43,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:48:03] 2025-06-05 01:47:43,109 | INFO     | traces error code: 0
[2025-06-05 03:48:03] 2025-06-05 01:47:43,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:48:03] 2025-06-05 01:47:43,262 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:48:03] 2025-06-05 01:47:43,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:48:03] 2025-06-05 01:47:43,267 [wrapper] pilotpid: 2892018
[2025-06-05 03:48:03] 2025-06-05 01:47:43,270 [wrapper] Pilot exit status: 0
[2025-06-05 03:48:03] 2025-06-05 01:47:43,308 [wrapper] pandaids: 6677977868
[2025-06-05 03:48:03] 2025-06-05 01:47:43,353 [wrapper] cleanup supervisor_pilot 3135355 2892019
[2025-06-05 03:48:03] 2025-06-05 01:47:43,359 [wrapper] Test setup, not cleaning
[2025-06-05 03:48:03] 2025-06-05 01:47:43,362 [wrapper] apfmon messages muted
[2025-06-05 03:48:03] 2025-06-05 01:47:43,365 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:48:03] 2025-06-05 01:47:43,367 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:48:03]  *** Error codes and diagnostics ***
[2025-06-05 03:48:03]     "exeErrorCode": 0,
[2025-06-05 03:48:03]     "exeErrorDiag": "",
[2025-06-05 03:48:03]     "pilotErrorCode": 0,
[2025-06-05 03:48:03]     "pilotErrorDiag": "",
[2025-06-05 03:48:03]  *** Listing of results directory ***
[2025-06-05 03:48:03] total 399240
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:16 queuedata.json
[2025-06-05 03:48:03] -rwx------ 1 boinc boinc     37140 Jun  3 21:18 runpilot2-wrapper.sh
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc       100 Jun  5 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:48:03] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:38 run_atlas
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc       105 Jun  5 00:38 job.xml
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc      6418 Jun  5 00:38 init_data.xml
[2025-06-05 03:48:03] -rw-r--r-- 2 boinc boinc 216037154 Jun  5 00:38 EVNT.45006593._001748.pool.root.1
[2025-06-05 03:48:03] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:38 start_atlas.sh
[2025-06-05 03:48:03] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:38 shared
[2025-06-05 03:48:03] -rw-r--r-- 2 boinc boinc    508879 Jun  5 00:38 input.tar.gz
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc         0 Jun  5 00:38 boinc_lockfile
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc      2524 Jun  5 00:38 pandaJob.out
[2025-06-05 03:48:03] -rw------- 1 boinc boinc    987032 Jun  5 00:38 agis_schedconf.cvmfs.json
[2025-06-05 03:48:03] drwx------ 4 boinc boinc      4096 Jun  5 00:38 pilot3
[2025-06-05 03:48:03] -rw------- 1 boinc boinc 186216593 Jun  5 03:46 HITS.45006595._043598.pool.root.1
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc       528 Jun  5 03:46 boinc_task_state.xml
[2025-06-05 03:48:03] -rw------- 1 boinc boinc        95 Jun  5 03:47 pilot_heartbeat.json
[2025-06-05 03:48:03] -rw------- 1 boinc boinc      1032 Jun  5 03:47 memory_monitor_summary.json
[2025-06-05 03:48:03] -rw------- 1 boinc boinc   1598969 Jun  5 03:47 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:48:03] -rw------- 1 boinc boinc    295166 Jun  5 03:47 log.45006595._043598.job.log.tgz.1
[2025-06-05 03:48:03] -rw------- 1 boinc boinc      7721 Jun  5 03:47 heartbeat.json
[2025-06-05 03:48:03] -rw------- 1 boinc boinc      4487 Jun  5 03:47 pilotlog.txt
[2025-06-05 03:48:03] -rw------- 1 boinc boinc   1071728 Jun  5 03:47 log.45006595._043598.job.log.1
[2025-06-05 03:48:03] -rw------- 1 boinc boinc       357 Jun  5 03:47 output.list
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc       620 Jun  5 03:47 runtime_log
[2025-06-05 03:48:03] -rw------- 1 boinc boinc   1382400 Jun  5 03:47 result.tar.gz
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc      9021 Jun  5 03:47 runtime_log.err
[2025-06-05 03:48:03] -rw------- 1 boinc boinc       664 Jun  5 03:47 UPINDmSKmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8jZKDmhMXjVn.diag
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc      8192 Jun  5 03:48 boinc_mmap_file
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc     21067 Jun  5 03:48 stderr.txt
[2025-06-05 03:48:03] -rw-r--r-- 1 boinc boinc        26 Jun  5 03:48 wrapper_checkpoint.txt
[2025-06-05 03:48:03] HITS file was successfully produced:
[2025-06-05 03:48:03] -rw------- 1 boinc boinc 186216593 Jun  5 03:46 shared/HITS.pool.root.1
[2025-06-05 03:48:03]  *** Contents of shared directory: ***
[2025-06-05 03:48:03] total 394708
[2025-06-05 03:48:03] -rw-r--r-- 2 boinc boinc 216037154 Jun  5 00:38 ATLAS.root_0
[2025-06-05 03:48:03] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:38 start_atlas.sh
[2025-06-05 03:48:03] -rw-r--r-- 2 boinc boinc    508879 Jun  5 00:38 input.tar.gz
[2025-06-05 03:48:03] -rw------- 1 boinc boinc 186216593 Jun  5 03:46 HITS.pool.root.1
[2025-06-05 03:48:03] -rw------- 1 boinc boinc   1382400 Jun  5 03:47 result.tar.gz
03:48:05 (2888450): run_atlas exited; CPU time 43683.624246
03:48:05 (2888450): called boinc_finish(0)

</stderr_txt>
]]>

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