Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:18:00 (12595): wrapper (7.7.26015): starting
12:18:00 (12595): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:18:00] Arguments: --nthreads 8
[2025-06-04 12:18:00] Threads: 8
[2025-06-04 12:18:00] Checking for CVMFS
[2025-06-04 12:18:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:18:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:18:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:18:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:18:02] 2.11.2.0 13500 33190 88320 146775 0 16 18713508 25165825 3910 130560 0 16606526 99.835 19157716 2586 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 12:18:02] CVMFS is ok
[2025-06-04 12:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:18:02] Checking for apptainer binary...
[2025-06-04 12:18:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:18:02] Running /usr/bin/apptainer --version
[2025-06-04 12:18:02] apptainer version 1.3.2-1.el7
[2025-06-04 12:18:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:18:11] cg-vwn363.simple-grid.lan
[2025-06-04 12:18:11] apptainer works
[2025-06-04 12:18:11] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:18:11] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:18:11] Starting ATLAS job with PandaID=6665841790
[2025-06-04 12:18:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:38:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:38:39] 2025-06-04 16:03:08,964 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6665841790/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:38:39] 2025-06-04 16:03:08,965 | INFO     | extracted standard info from prmon json
[2025-06-04 18:38:39] 2025-06-04 16:03:08,965 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:38:39] 2025-06-04 16:03:08,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:38:39] 2025-06-04 16:03:08,965 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:38:39] 2025-06-04 16:03:08,965 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:38:39] 2025-06-04 16:03:08,972 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:38:39] 2025-06-04 16:03:08,973 | INFO     | sum of square deviations: 10842205148.0
[2025-06-04 18:38:39] 2025-06-04 16:03:08,986 | INFO     | sum of deviations: 127893348897.0
[2025-06-04 18:38:39] 2025-06-04 16:03:08,987 | INFO     | mean x: 1749042921.0
[2025-06-04 18:38:39] 2025-06-04 16:03:08,987 | INFO     | mean y: 2453644.1529051987
[2025-06-04 18:38:39] 2025-06-04 16:03:08,987 | INFO     | -- intersect: -20629046449.95332
[2025-06-04 18:38:39] 2025-06-04 16:03:08,987 | INFO     | intersect: -20629046449.95332
[2025-06-04 18:38:39] 2025-06-04 16:03:08,988 | INFO     | chi2: 8.069685390693934
[2025-06-04 18:38:39] 2025-06-04 16:03:08,988 | INFO     | sum of square deviations: 10352419220.5
[2025-06-04 18:38:39] 2025-06-04 16:03:08,991 | INFO     | sum of deviations: 147247803772.49994
[2025-06-04 18:38:39] 2025-06-04 16:03:08,992 | INFO     | mean x: 1749042768.5
[2025-06-04 18:38:39] 2025-06-04 16:03:08,992 | INFO     | mean y: 2459586.363354037
[2025-06-04 18:38:39] 2025-06-04 16:03:08,992 | INFO     | -- intersect: -24875078782.234444
[2025-06-04 18:38:39] 2025-06-04 16:03:08,992 | INFO     | intersect: -24875078782.234444
[2025-06-04 18:38:39] 2025-06-04 16:03:08,993 | INFO     | chi2: 7.351877703851607
[2025-06-04 18:38:39] 2025-06-04 16:03:08,993 | INFO     | current chi2=7.351877703851607 (change=8.895113651767787 %)
[2025-06-04 18:38:39] 2025-06-04 16:03:08,993 | INFO     | right removable region: 321
[2025-06-04 18:38:39] 2025-06-04 16:03:08,994 | INFO     | sum of square deviations: 10352419220.5
[2025-06-04 18:38:39] 2025-06-04 16:03:08,997 | INFO     | sum of deviations: 12119535449.000004
[2025-06-04 18:38:39] 2025-06-04 16:03:08,997 | INFO     | mean x: 1749043073.5
[2025-06-04 18:38:39] 2025-06-04 16:03:08,997 | INFO     | mean y: 2489675.4906832296
[2025-06-04 18:38:39] 2025-06-04 16:03:08,997 | INFO     | -- intersect: -2045107999.9526968
[2025-06-04 18:38:39] 2025-06-04 16:03:08,997 | INFO     | intersect: -2045107999.9526968
[2025-06-04 18:38:39] 2025-06-04 16:03:08,998 | INFO     | chi2: 3.109637729466292
[2025-06-04 18:38:39] 2025-06-04 16:03:08,998 | INFO     | current chi2=3.109637729466292 (change=61.465192520982704 %)
[2025-06-04 18:38:39] 2025-06-04 16:03:08,999 | INFO     | sum of square deviations: 9877610318.0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,002 | INFO     | sum of deviations: -60700280709.0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,002 | INFO     | mean x: 1749043226.0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,002 | INFO     | mean y: 2512996.9211356468
[2025-06-04 18:38:39] 2025-06-04 16:03:09,002 | INFO     | -- intersect: 10750802448.76413
[2025-06-04 18:38:39] 2025-06-04 16:03:09,002 | INFO     | intersect: 10750802448.76413
[2025-06-04 18:38:39] 2025-06-04 16:03:09,003 | INFO     | chi2: 1.0280347637145628
[2025-06-04 18:38:39] 2025-06-04 16:03:09,003 | INFO     | current chi2=1.0280347637145628 (change=66.9403688419035 %)
[2025-06-04 18:38:39] 2025-06-04 16:03:09,004 | INFO     | sum of square deviations: 9417545878.0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,007 | INFO     | sum of deviations: -64046965829.50001
[2025-06-04 18:38:39] 2025-06-04 16:03:09,007 | INFO     | mean x: 1749043378.5
[2025-06-04 18:38:39] 2025-06-04 16:03:09,007 | INFO     | mean y: 2514075.9262820515
[2025-06-04 18:38:39] 2025-06-04 16:03:09,007 | INFO     | -- intersect: 11897430538.057985
[2025-06-04 18:38:39] 2025-06-04 16:03:09,007 | INFO     | intersect: 11897430538.057985
[2025-06-04 18:38:39] 2025-06-04 16:03:09,008 | INFO     | chi2: 0.9810084693016395
[2025-06-04 18:38:39] 2025-06-04 16:03:09,008 | INFO     | current chi2=0.9810084693016395 (change=4.574387566720485 %)
[2025-06-04 18:38:39] 2025-06-04 16:03:09,008 | INFO     | left removable region: 30
[2025-06-04 18:38:39] 2025-06-04 16:03:09,008 | INFO     | sum of square deviations: 7641036290.0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,011 | INFO     | sum of deviations: -12584962276.999964
[2025-06-04 18:38:39] 2025-06-04 16:03:09,011 | INFO     | mean x: 1749043653.0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,012 | INFO     | mean y: 2510231.848797251
[2025-06-04 18:38:39] 2025-06-04 16:03:09,012 | INFO     | -- intersect: 2883225302.2167215
[2025-06-04 18:38:39] 2025-06-04 16:03:09,012 | INFO     | intersect: 2883225302.2167215
[2025-06-04 18:38:39] 2025-06-04 16:03:09,012 | INFO     | chi2: 0.11077744225387061
[2025-06-04 18:38:39] 2025-06-04 16:03:09,012 | INFO     | -- intersect: 2883225302.2167215
[2025-06-04 18:38:39] 2025-06-04 16:03:09,013 | INFO     | current memory leak: -1.65 B/s (using 291 data points, chi2=0.11)
[2025-06-04 18:38:39] 2025-06-04 16:03:09,013 | INFO     | ..............................
[2025-06-04 18:38:39] 2025-06-04 16:03:09,014 | INFO     | . Timing measurements:
[2025-06-04 18:38:39] 2025-06-04 16:03:09,014 | INFO     | . get job = 0 s
[2025-06-04 18:38:39] 2025-06-04 16:03:09,014 | INFO     | . initial setup = 9 s
[2025-06-04 18:38:39] 2025-06-04 16:03:09,014 | INFO     | . payload setup = 154 s
[2025-06-04 18:38:39] 2025-06-04 16:03:09,014 | INFO     | . stage-in = 0 s
[2025-06-04 18:38:39] 2025-06-04 16:03:09,014 | INFO     | . payload execution = 20066 s
[2025-06-04 18:38:39] 2025-06-04 16:03:09,014 | INFO     | . stage-out = 2 s
[2025-06-04 18:38:39] 2025-06-04 16:03:09,014 | INFO     | . log creation = 0 s
[2025-06-04 18:38:39] 2025-06-04 16:03:09,014 | INFO     | ..............................
[2025-06-04 18:38:39] 2025-06-04 16:03:09,147 | INFO     | 
[2025-06-04 18:38:39] 2025-06-04 16:03:09,147 | INFO     | job summary report
[2025-06-04 18:38:39] 2025-06-04 16:03:09,147 | INFO     | --------------------------------------------------
[2025-06-04 18:38:39] 2025-06-04 16:03:09,147 | INFO     | PanDA job id: 6665841790
[2025-06-04 18:38:39] 2025-06-04 16:03:09,147 | INFO     | task id: 44871837
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | errors: (none)
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | pilot state: finished 
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | transexitcode: 0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | exeerrorcode: 0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | exeerrordiag: 
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | exitcode: 0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | exitmsg: OK
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | cpuconsumptiontime: 74533 s
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | nevents: 400
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | neventsw: 0
[2025-06-04 18:38:39] 2025-06-04 16:03:09,148 | INFO     | pid: 27814
[2025-06-04 18:38:39] 2025-06-04 16:03:09,149 | INFO     | pgrp: 27814
[2025-06-04 18:38:39] 2025-06-04 16:03:09,149 | INFO     | corecount: 8
[2025-06-04 18:38:39] 2025-06-04 16:03:09,149 | INFO     | event service: False
[2025-06-04 18:38:39] 2025-06-04 16:03:09,149 | INFO     | sizes: {0: 2404400, 1: 2405085, 2: 2405284, 13: 2405284, 24: 2405340, 34: 2405368, 45: 2405524, 56: 2405552, 67: 2405580, 77: 2405608, 88: 2405664, 93: 2406178, 99
[2025-06-04 18:38:39] 2025-06-04 16:03:09,149 | INFO     | --------------------------------------------------
[2025-06-04 18:38:39] 2025-06-04 16:03:09,149 | INFO     | 
[2025-06-04 18:38:39] 2025-06-04 16:03:09,149 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-04 18:38:39] 2025-06-04 16:03:09,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,600 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:38:39] 2025-06-04 16:03:09,602 | INFO     | job 6665841790 has completed (purged errors)
[2025-06-04 18:38:39] 2025-06-04 16:03:09,602 | INFO     | overall cleanup function is called
[2025-06-04 18:38:39] 2025-06-04 16:03:10,611 | INFO     | --- collectZombieJob: --- 10, [27814]
[2025-06-04 18:38:39] 2025-06-04 16:03:10,611 | INFO     | zombie collector waiting for pid 27814
[2025-06-04 18:38:39] 2025-06-04 16:03:10,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:38:39] 2025-06-04 16:03:10,611 | INFO     | collected zombie processes
[2025-06-04 18:38:39] 2025-06-04 16:03:10,612 | INFO     | will attempt to kill all subprocesses of pid=27814
[2025-06-04 18:38:39] 2025-06-04 16:03:10,747 | INFO     | process IDs to be killed: [27814] (in reverse order)
[2025-06-04 18:38:39] 2025-06-04 16:03:11,675 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:38:39] 2025-06-04 16:03:11,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:38:39] 2025-06-04 16:03:11,679 | INFO     | did not find any defunct processes belonging to 27814
[2025-06-04 18:38:39] 2025-06-04 16:03:11,682 | INFO     | did not find any defunct processes belonging to 27814
[2025-06-04 18:38:39] 2025-06-04 16:03:11,683 | INFO     | ready for new job
[2025-06-04 18:38:39] 2025-06-04 16:03:11,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:38:39] 2025-06-04 16:03:11,685 | INFO     | **************************************
[2025-06-04 18:38:39] 2025-06-04 16:03:11,685 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:38:39] 2025-06-04 16:03:11,685 | INFO     | **************************************
[2025-06-04 18:38:39] 2025-06-04 16:03:11,686 | INFO     | 
[2025-06-04 18:38:39] 2025-06-04 16:03:11,686 | INFO     | pilot is running in a VM
[2025-06-04 18:38:39] 2025-06-04 16:03:11,686 | INFO     | architecture information:
[2025-06-04 18:38:39] 2025-06-04 16:03:11,687 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:38:39] 2025-06-04 16:03:11,821 | INFO     | cat /etc/os-release:
[2025-06-04 18:38:39] NAME="CentOS Linux"
[2025-06-04 18:38:39] VERSION="7 (Core)"
[2025-06-04 18:38:39] ID="centos"
[2025-06-04 18:38:39] ID_LIKE="rhel fedora"
[2025-06-04 18:38:39] VERSION_ID="7"
[2025-06-04 18:38:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:38:39] ANSI_COLOR="0;31"
[2025-06-04 18:38:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:38:39] HOME_URL="https://www.centos.org/"
[2025-06-04 18:38:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:38:39] 
[2025-06-04 18:38:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:38:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:38:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:38:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:38:39] 
[2025-06-04 18:38:39] 2025-06-04 16:03:11,822 | INFO     | **************************************
[2025-06-04 18:38:39] 2025-06-04 16:03:12,324 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-04 18:38:39] 2025-06-04 16:03:12,476 | INFO     | sufficient remaining disk space (496595107840 B)
[2025-06-04 18:38:39] 2025-06-04 16:03:12,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:38:39] 2025-06-04 16:03:12,477 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:38:39] 2025-06-04 16:03:12,477 | INFO     | update_server=False
[2025-06-04 18:38:39] 2025-06-04 16:03:12,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:38:39] 2025-06-04 16:03:12,896 | INFO     | all job control threads have been joined
[2025-06-04 18:38:39] 2025-06-04 16:03:13,189 | INFO     | all payload control threads have been joined
[2025-06-04 18:38:39] 2025-06-04 16:03:13,205 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:38:39] 2025-06-04 16:03:13,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:38:39] 2025-06-04 16:03:13,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:38:39] 2025-06-04 16:03:13,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:38:39] 2025-06-04 16:03:13,350 | INFO     | aborting loop
[2025-06-04 18:38:39] 2025-06-04 16:03:13,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:38:39] 2025-06-04 16:03:13,409 | INFO     | all data control threads have been joined
[2025-06-04 18:38:39] 2025-06-04 16:03:13,483 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:13,519 | INFO     | [job] validate thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:13,629 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:13,714 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:13,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:38:39] 2025-06-04 16:03:13,904 | INFO     | [job] control thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:14,009 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:14,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:38:39] 2025-06-04 16:03:14,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:14,195 | INFO     | [payload] control thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:14,224 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:14,356 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:14,415 | INFO     | [data] control thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:14,569 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:14,600 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:15,171 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:15,358 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:17,797 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:38:39] 2025-06-04 16:03:19,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789065393984)>', '<ExcThread(monitor, started 139788468336384)>']
[2025-06-04 18:38:39] 2025-06-04 16:03:20,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:38:39] 2025-06-04 16:03:20,246 | INFO     | [monitor] control thread has ended
[2025-06-04 18:38:39] 2025-06-04 16:03:24,660 | INFO     | all workflow threads have been joined
[2025-06-04 18:38:39] 2025-06-04 16:03:24,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:38:39] 2025-06-04 16:03:24,660 | INFO     | traces error code: 0
[2025-06-04 18:38:39] 2025-06-04 16:03:24,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:38:39] 2025-06-04 16:03:24,863 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:38:39] 2025-06-04 16:03:24,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:38:39] 2025-06-04 16:03:25,019 [wrapper] pilotpid: 17237
[2025-06-04 18:38:39] 2025-06-04 16:03:25,140 [wrapper] Pilot exit status: 0
[2025-06-04 18:38:39] 2025-06-04 16:03:25,382 [wrapper] pandaids: 6665841790
[2025-06-04 18:38:39] 2025-06-04 16:03:25,501 [wrapper] cleanup supervisor_pilot  7920 17238
[2025-06-04 18:38:39] 2025-06-04 16:03:25,569 [wrapper] Test setup, not cleaning
[2025-06-04 18:38:39] 2025-06-04 16:03:25,629 [wrapper] apfmon messages muted
[2025-06-04 18:38:39] 2025-06-04 16:03:25,713 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:38:39] 2025-06-04 16:03:25,794 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:38:39]  *** Error codes and diagnostics ***
[2025-06-04 18:38:39]     "exeErrorCode": 0,
[2025-06-04 18:38:39]     "exeErrorDiag": "",
[2025-06-04 18:38:39]     "pilotErrorCode": 0,
[2025-06-04 18:38:39]     "pilotErrorDiag": "",
[2025-06-04 18:38:39]  *** Listing of results directory ***
[2025-06-04 18:38:39] total 425308
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc    495897 May 26 09:32 pilot3.tar.gz
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc      5111 May 26 09:44 queuedata.json
[2025-06-04 18:38:39] -rwx------. 1 boinc boinc     37140 May 26 09:46 runpilot2-wrapper.sh
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc       100 Jun  4 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:38:39] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 12:17 run_atlas
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc       105 Jun  4 12:17 job.xml
[2025-06-04 18:38:39] -rw-r--r--. 2 boinc boinc 225059659 Jun  4 12:18 EVNT.44871834._001891.pool.root.1
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc      6392 Jun  4 12:18 init_data.xml
[2025-06-04 18:38:39] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:18 start_atlas.sh
[2025-06-04 18:38:39] drwxrwx--x. 2 boinc boinc        68 Jun  4 12:18 shared
[2025-06-04 18:38:39] -rw-r--r--. 2 boinc boinc    508881 Jun  4 12:18 input.tar.gz
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc         0 Jun  4 12:18 boinc_lockfile
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc      2556 Jun  4 12:18 pandaJob.out
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc    986766 Jun  4 12:21 agis_schedconf.cvmfs.json
[2025-06-04 18:38:39] drwx------. 4 boinc boinc      4096 Jun  4 12:21 pilot3
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc 202307074 Jun  4 18:00 HITS.44871837._047415.pool.root.1
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:01 boinc_task_state.xml
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc      1019 Jun  4 18:01 memory_monitor_summary.json
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc   1598969 Jun  4 18:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc    426432 Jun  4 18:01 log.44871837._047415.job.log.tgz.1
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc        95 Jun  4 18:02 pilot_heartbeat.json
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc      7691 Jun  4 18:03 heartbeat.json
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc      4416 Jun  4 18:03 pilotlog.txt
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc   1732667 Jun  4 18:03 log.44871837._047415.job.log.1
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc       357 Jun  4 18:03 output.list
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:03 runtime_log
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc   2181120 Jun  4 18:03 result.tar.gz
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc      8659 Jun  4 18:03 runtime_log.err
[2025-06-04 18:38:39] -rw-------. 1 boinc boinc       658 Jun  4 18:03 6bQODmMihd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYoPKDmo5LWAn.diag
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:38 boinc_mmap_file
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:38 wrapper_checkpoint.txt
[2025-06-04 18:38:39] -rw-r--r--. 1 boinc boinc     20537 Jun  4 18:38 stderr.txt
[2025-06-04 18:38:40] HITS file was successfully produced:
[2025-06-04 18:38:40] -rw-------. 1 boinc boinc 202307074 Jun  4 18:00 shared/HITS.pool.root.1
[2025-06-04 18:38:40]  *** Contents of shared directory: ***
[2025-06-04 18:38:40] total 420004
[2025-06-04 18:38:40] -rw-r--r--. 2 boinc boinc 225059659 Jun  4 12:18 ATLAS.root_0
[2025-06-04 18:38:40] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:18 start_atlas.sh
[2025-06-04 18:38:40] -rw-r--r--. 2 boinc boinc    508881 Jun  4 12:18 input.tar.gz
[2025-06-04 18:38:40] -rw-------. 1 boinc boinc 202307074 Jun  4 18:00 HITS.pool.root.1
[2025-06-04 18:38:40] -rw-------. 1 boinc boinc   2181120 Jun  4 18:03 result.tar.gz
18:38:41 (12595): run_atlas exited; CPU time 74821.632048
18:38:41 (12595): called boinc_finish(0)

</stderr_txt>
]]>

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