Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:07:47 (26564): wrapper (7.7.26015): starting
11:07:47 (26564): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:07:47] Arguments: --nthreads 8
[2025-06-04 11:07:47] Threads: 8
[2025-06-04 11:07:47] Checking for CVMFS
[2025-06-04 11:07:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:07:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:07:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:07:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:07:49] 2.11.2.0 23942 33004 101408 146773 3 62 24947438 25165824 3907 130560 0 18162077 99.848 17554504 1859 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 11:07:49] CVMFS is ok
[2025-06-04 11:07:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:07:49] Checking for apptainer binary...
[2025-06-04 11:07:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:07:49] Running /usr/bin/apptainer --version
[2025-06-04 11:07:50] apptainer version 1.3.2-1.el7
[2025-06-04 11:07:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:38:14] cg-vwn380.simple-grid.lan
[2025-06-04 11:38:14] apptainer works
[2025-06-04 11:38:14] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:38:14] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:38:14] Starting ATLAS job with PandaID=6677917733
[2025-06-04 11:38:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:43:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:43:59] 2025-06-04 13:24:43,998 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:43:59] 2025-06-04 13:24:43,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:43:59] 2025-06-04 13:24:43,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:43:59] 2025-06-04 13:24:43,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:43:59] 2025-06-04 13:24:44,004 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:43:59] 2025-06-04 13:24:44,005 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 15:43:59] 2025-06-04 13:24:44,006 | INFO     | sum of deviations: 71549409753.50003
[2025-06-04 15:43:59] 2025-06-04 13:24:44,006 | INFO     | mean x: 1749036997.5
[2025-06-04 15:43:59] 2025-06-04 13:24:44,006 | INFO     | mean y: 2420224.9857142856
[2025-06-04 15:43:59] 2025-06-04 13:24:44,007 | INFO     | -- intersect: -43576713351.49419
[2025-06-04 15:43:59] 2025-06-04 13:24:44,007 | INFO     | intersect: -43576713351.49419
[2025-06-04 15:43:59] 2025-06-04 13:24:44,007 | INFO     | chi2: 7.4814969892799965
[2025-06-04 15:43:59] 2025-06-04 13:24:44,008 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,009 | INFO     | sum of deviations: 83551549208.0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,010 | INFO     | mean x: 1749036845.0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,010 | INFO     | mean y: 2429161.7463414636
[2025-06-04 15:43:59] 2025-06-04 13:24:44,010 | INFO     | -- intersect: -54702163997.61857
[2025-06-04 15:43:59] 2025-06-04 13:24:44,010 | INFO     | intersect: -54702163997.61857
[2025-06-04 15:43:59] 2025-06-04 13:24:44,010 | INFO     | chi2: 6.789552183836983
[2025-06-04 15:43:59] 2025-06-04 13:24:44,010 | INFO     | current chi2=6.789552183836983 (change=9.248748030434017 %)
[2025-06-04 15:43:59] 2025-06-04 13:24:44,010 | INFO     | right removable region: 204
[2025-06-04 15:43:59] 2025-06-04 13:24:44,011 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,012 | INFO     | sum of deviations: -720428788.0000114
[2025-06-04 15:43:59] 2025-06-04 13:24:44,013 | INFO     | mean x: 1749037150.0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,013 | INFO     | mean y: 2475215.926829268
[2025-06-04 15:43:59] 2025-06-04 13:24:44,013 | INFO     | -- intersect: 474169289.7522969
[2025-06-04 15:43:59] 2025-06-04 13:24:44,016 | INFO     | intersect: 474169289.7522969
[2025-06-04 15:43:59] 2025-06-04 13:24:44,017 | INFO     | chi2: 2.5227053097056484
[2025-06-04 15:43:59] 2025-06-04 13:24:44,017 | INFO     | current chi2=2.5227053097056484 (change=66.28074149705128 %)
[2025-06-04 15:43:59] 2025-06-04 13:24:44,017 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,019 | INFO     | sum of deviations: -39003779267.5
[2025-06-04 15:43:59] 2025-06-04 13:24:44,019 | INFO     | mean x: 1749037302.5
[2025-06-04 15:43:59] 2025-06-04 13:24:44,019 | INFO     | mean y: 2505646.755
[2025-06-04 15:43:59] 2025-06-04 13:24:44,019 | INFO     | -- intersect: 27503488069.461346
[2025-06-04 15:43:59] 2025-06-04 13:24:44,019 | INFO     | intersect: 27503488069.461346
[2025-06-04 15:43:59] 2025-06-04 13:24:44,020 | INFO     | chi2: 0.9718399437412654
[2025-06-04 15:43:59] 2025-06-04 13:24:44,020 | INFO     | current chi2=0.9718399437412654 (change=61.47627945276491 %)
[2025-06-04 15:43:59] 2025-06-04 13:24:44,020 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,022 | INFO     | sum of deviations: -41292132383.0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,022 | INFO     | mean x: 1749037455.0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,022 | INFO     | mean y: 2507522.205128205
[2025-06-04 15:43:59] 2025-06-04 13:24:44,022 | INFO     | -- intersect: 31414507193.56695
[2025-06-04 15:43:59] 2025-06-04 13:24:44,022 | INFO     | intersect: 31414507193.56695
[2025-06-04 15:43:59] 2025-06-04 13:24:44,023 | INFO     | chi2: 0.9371736320337027
[2025-06-04 15:43:59] 2025-06-04 13:24:44,023 | INFO     | current chi2=0.9371736320337027 (change=3.5670803542102503 %)
[2025-06-04 15:43:59] 2025-06-04 13:24:44,023 | INFO     | left removable region: 30
[2025-06-04 15:43:59] 2025-06-04 13:24:44,023 | INFO     | sum of square deviations: 1633472487.5
[2025-06-04 15:43:59] 2025-06-04 13:24:44,024 | INFO     | sum of deviations: -8415221327.999999
[2025-06-04 15:43:59] 2025-06-04 13:24:44,025 | INFO     | mean x: 1749037729.5
[2025-06-04 15:43:59] 2025-06-04 13:24:44,025 | INFO     | mean y: 2500640.4942528736
[2025-06-04 15:43:59] 2025-06-04 13:24:44,025 | INFO     | -- intersect: 9013083749.421635
[2025-06-04 15:43:59] 2025-06-04 13:24:44,025 | INFO     | intersect: 9013083749.421635
[2025-06-04 15:43:59] 2025-06-04 13:24:44,025 | INFO     | chi2: 0.07674076647882841
[2025-06-04 15:43:59] 2025-06-04 13:24:44,026 | INFO     | -- intersect: 9013083749.421635
[2025-06-04 15:43:59] 2025-06-04 13:24:44,026 | INFO     | current memory leak: -5.15 B/s (using 174 data points, chi2=0.08)
[2025-06-04 15:43:59] 2025-06-04 13:24:44,026 | INFO     | ..............................
[2025-06-04 15:43:59] 2025-06-04 13:24:44,027 | INFO     | . Timing measurements:
[2025-06-04 15:43:59] 2025-06-04 13:24:44,027 | INFO     | . get job = 0 s
[2025-06-04 15:43:59] 2025-06-04 13:24:44,027 | INFO     | . initial setup = 9 s
[2025-06-04 15:43:59] 2025-06-04 13:24:44,027 | INFO     | . payload setup = 189 s
[2025-06-04 15:43:59] 2025-06-04 13:24:44,027 | INFO     | . stage-in = 0 s
[2025-06-04 15:43:59] 2025-06-04 13:24:44,027 | INFO     | . payload execution = 12914 s
[2025-06-04 15:43:59] 2025-06-04 13:24:44,027 | INFO     | . stage-out = 4 s
[2025-06-04 15:43:59] 2025-06-04 13:24:44,027 | INFO     | . log creation = 0 s
[2025-06-04 15:43:59] 2025-06-04 13:24:44,027 | INFO     | ..............................
[2025-06-04 15:43:59] 2025-06-04 13:24:44,164 | INFO     | 
[2025-06-04 15:43:59] 2025-06-04 13:24:44,164 | INFO     | job summary report
[2025-06-04 15:43:59] 2025-06-04 13:24:44,164 | INFO     | --------------------------------------------------
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | PanDA job id: 6677917733
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | task id: 45006595
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | errors: (none)
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | pilot state: finished 
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | transexitcode: 0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | exeerrorcode: 0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | exeerrordiag: 
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | exitcode: 0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | exitmsg: OK
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | cpuconsumptiontime: 47564 s
[2025-06-04 15:43:59] 2025-06-04 13:24:44,165 | INFO     | nevents: 400
[2025-06-04 15:43:59] 2025-06-04 13:24:44,166 | INFO     | neventsw: 0
[2025-06-04 15:43:59] 2025-06-04 13:24:44,166 | INFO     | pid: 23501
[2025-06-04 15:43:59] 2025-06-04 13:24:44,166 | INFO     | pgrp: 23501
[2025-06-04 15:43:59] 2025-06-04 13:24:44,166 | INFO     | corecount: 8
[2025-06-04 15:43:59] 2025-06-04 13:24:44,166 | INFO     | event service: False
[2025-06-04 15:43:59] 2025-06-04 13:24:44,166 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 77: 2405508, 87: 2405798, 13107: 2435090, 13108: 2435
[2025-06-04 15:43:59] 2025-06-04 13:24:44,166 | INFO     | --------------------------------------------------
[2025-06-04 15:43:59] 2025-06-04 13:24:44,166 | INFO     | 
[2025-06-04 15:43:59] 2025-06-04 13:24:44,166 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 15:43:59] 2025-06-04 13:24:44,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:43:59] 2025-06-04 13:24:44,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:43:59] 2025-06-04 13:24:44,474 | INFO     | job 6677917733 has completed (purged errors)
[2025-06-04 15:43:59] 2025-06-04 13:24:44,474 | INFO     | overall cleanup function is called
[2025-06-04 15:43:59] 2025-06-04 13:24:45,483 | INFO     | --- collectZombieJob: --- 10, [23501]
[2025-06-04 15:43:59] 2025-06-04 13:24:45,483 | INFO     | zombie collector waiting for pid 23501
[2025-06-04 15:43:59] 2025-06-04 13:24:45,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:43:59] 2025-06-04 13:24:45,484 | INFO     | collected zombie processes
[2025-06-04 15:43:59] 2025-06-04 13:24:45,484 | INFO     | will attempt to kill all subprocesses of pid=23501
[2025-06-04 15:43:59] 2025-06-04 13:24:45,601 | INFO     | process IDs to be killed: [23501] (in reverse order)
[2025-06-04 15:43:59] 2025-06-04 13:24:46,323 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:43:59] 2025-06-04 13:24:46,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:43:59] 2025-06-04 13:24:46,326 | INFO     | did not find any defunct processes belonging to 23501
[2025-06-04 15:43:59] 2025-06-04 13:24:46,330 | INFO     | did not find any defunct processes belonging to 23501
[2025-06-04 15:43:59] 2025-06-04 13:24:46,330 | INFO     | ready for new job
[2025-06-04 15:43:59] 2025-06-04 13:24:46,330 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:43:59] 2025-06-04 13:24:46,332 | INFO     | **************************************
[2025-06-04 15:43:59] 2025-06-04 13:24:46,333 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:43:59] 2025-06-04 13:24:46,333 | INFO     | **************************************
[2025-06-04 15:43:59] 2025-06-04 13:24:46,333 | INFO     | 
[2025-06-04 15:43:59] 2025-06-04 13:24:46,342 | INFO     | pilot is running in a VM
[2025-06-04 15:43:59] 2025-06-04 13:24:46,342 | INFO     | architecture information:
[2025-06-04 15:43:59] 2025-06-04 13:24:46,348 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:43:59] 2025-06-04 13:24:46,610 | INFO     | cat /etc/os-release:
[2025-06-04 15:43:59] NAME="CentOS Linux"
[2025-06-04 15:43:59] VERSION="7 (Core)"
[2025-06-04 15:43:59] ID="centos"
[2025-06-04 15:43:59] ID_LIKE="rhel fedora"
[2025-06-04 15:43:59] VERSION_ID="7"
[2025-06-04 15:43:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:43:59] ANSI_COLOR="0;31"
[2025-06-04 15:43:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:43:59] HOME_URL="https://www.centos.org/"
[2025-06-04 15:43:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:43:59] 
[2025-06-04 15:43:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:43:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:43:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:43:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:43:59] 
[2025-06-04 15:43:59] 2025-06-04 13:24:46,610 | INFO     | **************************************
[2025-06-04 15:43:59] 2025-06-04 13:24:47,115 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 15:43:59] 2025-06-04 13:24:47,293 | INFO     | sufficient remaining disk space (496436772864 B)
[2025-06-04 15:43:59] 2025-06-04 13:24:47,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:43:59] 2025-06-04 13:24:47,294 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:43:59] 2025-06-04 13:24:47,294 | INFO     | update_server=False
[2025-06-04 15:43:59] 2025-06-04 13:24:47,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:43:59] 2025-06-04 13:24:47,388 | INFO     | all data control threads have been joined
[2025-06-04 15:43:59] 2025-06-04 13:24:47,500 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 15:43:59] 2025-06-04 13:24:47,500 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 15:43:59] 2025-06-04 13:24:47,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:43:59] 2025-06-04 13:24:47,501 | INFO     | will abort loop
[2025-06-04 15:43:59] 2025-06-04 13:24:48,080 | INFO     | all job control threads have been joined
[2025-06-04 15:43:59] 2025-06-04 13:24:48,270 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:43:59] 2025-06-04 13:24:48,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:43:59] 2025-06-04 13:24:48,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:43:59] 2025-06-04 13:24:48,300 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:48,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:43:59] 2025-06-04 13:24:48,394 | INFO     | [data] control thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:48,442 | INFO     | all payload control threads have been joined
[2025-06-04 15:43:59] 2025-06-04 13:24:48,506 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:48,702 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:49,029 | INFO     | [job] validate thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:49,086 | INFO     | [job] control thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:49,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:43:59] 2025-06-04 13:24:49,253 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:49,413 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:49,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:43:59] 2025-06-04 13:24:49,448 | INFO     | [payload] control thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:49,637 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:49,654 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:49,657 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:49,799 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:50,194 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:50,349 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:53,447 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:43:59] 2025-06-04 13:24:54,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896965224256)>', '<ExcThread(monitor, started 139896530392832)>']
[2025-06-04 15:43:59] 2025-06-04 13:24:55,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:43:59] 2025-06-04 13:24:55,312 | INFO     | [monitor] control thread has ended
[2025-06-04 15:43:59] 2025-06-04 13:24:59,680 | INFO     | all workflow threads have been joined
[2025-06-04 15:43:59] 2025-06-04 13:24:59,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:43:59] 2025-06-04 13:24:59,681 | INFO     | traces error code: 0
[2025-06-04 15:43:59] 2025-06-04 13:24:59,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:43:59] 2025-06-04 13:24:59,954 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:43:59] 2025-06-04 13:24:59,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:43:59] 2025-06-04 13:25:00,067 [wrapper] pilotpid: 14860
[2025-06-04 15:43:59] 2025-06-04 13:25:00,145 [wrapper] Pilot exit status: 0
[2025-06-04 15:43:59] 2025-06-04 13:25:00,644 [wrapper] pandaids: 6677917733
[2025-06-04 15:43:59] 2025-06-04 13:25:01,569 [wrapper] cleanup supervisor_pilot 21327 14861
[2025-06-04 15:43:59] 2025-06-04 13:25:01,652 [wrapper] Test setup, not cleaning
[2025-06-04 15:43:59] 2025-06-04 13:25:01,715 [wrapper] apfmon messages muted
[2025-06-04 15:43:59] 2025-06-04 13:25:01,800 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:43:59] 2025-06-04 13:25:01,859 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:43:59]  *** Error codes and diagnostics ***
[2025-06-04 15:43:59]     "exeErrorCode": 0,
[2025-06-04 15:43:59]     "exeErrorDiag": "",
[2025-06-04 15:43:59]     "pilotErrorCode": 0,
[2025-06-04 15:43:59]     "pilotErrorDiag": "",
[2025-06-04 15:43:59]  *** Listing of results directory ***
[2025-06-04 15:43:59] total 387984
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:52 queuedata.json
[2025-06-04 15:43:59] -rwx------. 1 boinc boinc     37140 Jun  3 19:53 runpilot2-wrapper.sh
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc       100 Jun  4 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:43:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 11:07 run_atlas
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc       105 Jun  4 11:07 job.xml
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc      6392 Jun  4 11:07 init_data.xml
[2025-06-04 15:43:59] -rw-r--r--. 2 boinc boinc 216746842 Jun  4 11:07 EVNT.45006593._001651.pool.root.1
[2025-06-04 15:43:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:07 start_atlas.sh
[2025-06-04 15:43:59] drwxrwx--x. 2 boinc boinc        68 Jun  4 11:07 shared
[2025-06-04 15:43:59] -rw-r--r--. 2 boinc boinc    508884 Jun  4 11:07 input.tar.gz
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc         0 Jun  4 11:07 boinc_lockfile
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc      2525 Jun  4 11:38 pandaJob.out
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc    986766 Jun  4 11:41 agis_schedconf.cvmfs.json
[2025-06-04 15:43:59] drwx------. 4 boinc boinc      4096 Jun  4 11:41 pilot3
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc 173675409 Jun  4 15:21 HITS.45006595._041241.pool.root.1
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc       531 Jun  4 15:22 boinc_task_state.xml
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc      1016 Jun  4 15:23 memory_monitor_summary.json
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc   1598969 Jun  4 15:23 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc    386520 Jun  4 15:23 log.45006595._041241.job.log.tgz.1
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc        95 Jun  4 15:23 pilot_heartbeat.json
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc      7689 Jun  4 15:24 heartbeat.json
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc      4602 Jun  4 15:24 pilotlog.txt
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc   1142594 Jun  4 15:25 log.45006595._041241.job.log.1
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc       357 Jun  4 15:25 output.list
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc       620 Jun  4 15:25 runtime_log
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc   1546240 Jun  4 15:25 result.tar.gz
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc      8659 Jun  4 15:25 runtime_log.err
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc       657 Jun  4 15:25 DRJNDmG0kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMUlKDmkxgpXn.diag
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc      8192 Jun  4 15:43 boinc_mmap_file
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc        28 Jun  4 15:43 wrapper_checkpoint.txt
[2025-06-04 15:43:59] -rw-r--r--. 1 boinc boinc     20485 Jun  4 15:43 stderr.txt
[2025-06-04 15:43:59] HITS file was successfully produced:
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc 173675409 Jun  4 15:21 shared/HITS.pool.root.1
[2025-06-04 15:43:59]  *** Contents of shared directory: ***
[2025-06-04 15:43:59] total 383304
[2025-06-04 15:43:59] -rw-r--r--. 2 boinc boinc 216746842 Jun  4 11:07 ATLAS.root_0
[2025-06-04 15:43:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:07 start_atlas.sh
[2025-06-04 15:43:59] -rw-r--r--. 2 boinc boinc    508884 Jun  4 11:07 input.tar.gz
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc 173675409 Jun  4 15:21 HITS.pool.root.1
[2025-06-04 15:43:59] -rw-------. 1 boinc boinc   1546240 Jun  4 15:25 result.tar.gz
15:44:01 (26564): run_atlas exited; CPU time 47760.006420
15:44:01 (26564): called boinc_finish(0)

</stderr_txt>
]]>

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