Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:08:10 (4662): wrapper (7.7.26015): starting
09:08:10 (4662): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:08:10] Arguments: --nthreads 8
[2025-06-04 09:08:10] Threads: 8
[2025-06-04 09:08:10] Checking for CVMFS
[2025-06-04 09:08:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:08:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:08:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:08:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:08:13] 2.11.2.0 20077 33054 92636 146771 3 18 18596852 25165824 3525 130560 0 16802058 99.759 19105844 1974 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 09:08:13] CVMFS is ok
[2025-06-04 09:08:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:08:13] Checking for apptainer binary...
[2025-06-04 09:08:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:08:13] Running /usr/bin/apptainer --version
[2025-06-04 09:08:13] apptainer version 1.3.2-1.el7
[2025-06-04 09:08:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:38:35] cg-vwn315.simple-grid.lan
[2025-06-04 09:38:35] apptainer works
[2025-06-04 09:38:35] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:38:35] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:38:35] Starting ATLAS job with PandaID=6666011324
[2025-06-04 09:38:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:17:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:17:28] 2025-06-04 13:08:30,373 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:17:28] 2025-06-04 13:08:30,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:17:28] 2025-06-04 13:08:30,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:17:28] 2025-06-04 13:08:30,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:17:28] 2025-06-04 13:08:30,380 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:17:28] 2025-06-04 13:08:30,380 | INFO     | sum of square deviations: 9237596457.5
[2025-06-04 15:17:28] 2025-06-04 13:08:30,384 | INFO     | sum of deviations: 129692157736.49998
[2025-06-04 15:17:28] 2025-06-04 13:08:30,384 | INFO     | mean x: 1749032843.5
[2025-06-04 15:17:28] 2025-06-04 13:08:30,384 | INFO     | mean y: 2471283.1903225807
[2025-06-04 15:17:28] 2025-06-04 13:08:30,384 | INFO     | -- intersect: -24553249944.63547
[2025-06-04 15:17:28] 2025-06-04 13:08:30,384 | INFO     | intersect: -24553249944.63547
[2025-06-04 15:17:28] 2025-06-04 13:08:30,385 | INFO     | chi2: 5.382975845467347
[2025-06-04 15:17:28] 2025-06-04 13:08:30,385 | INFO     | sum of square deviations: 8797783560.0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,388 | INFO     | sum of deviations: 127070908528.00003
[2025-06-04 15:17:28] 2025-06-04 13:08:30,389 | INFO     | mean x: 1749032691.0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,389 | INFO     | mean y: 2470375.593442623
[2025-06-04 15:17:28] 2025-06-04 13:08:30,389 | INFO     | -- intersect: -25259707487.138924
[2025-06-04 15:17:28] 2025-06-04 13:08:30,389 | INFO     | intersect: -25259707487.138924
[2025-06-04 15:17:28] 2025-06-04 13:08:30,390 | INFO     | chi2: 5.38796351307798
[2025-06-04 15:17:28] 2025-06-04 13:08:30,390 | INFO     | current chi2=5.38796351307798 (change=-0.09265632530811159 %)
[2025-06-04 15:17:28] 2025-06-04 13:08:30,390 | INFO     | right removable region: 304
[2025-06-04 15:17:28] 2025-06-04 13:08:30,390 | INFO     | sum of square deviations: 8797783560.0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,394 | INFO     | sum of deviations: 23063369037.0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,394 | INFO     | mean x: 1749032996.0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,394 | INFO     | mean y: 2508224.48852459
[2025-06-04 15:17:28] 2025-06-04 13:08:30,394 | INFO     | -- intersect: -4582577686.017524
[2025-06-04 15:17:28] 2025-06-04 13:08:30,394 | INFO     | intersect: -4582577686.017524
[2025-06-04 15:17:28] 2025-06-04 13:08:30,395 | INFO     | chi2: 0.8517892371417275
[2025-06-04 15:17:28] 2025-06-04 13:08:30,395 | INFO     | current chi2=0.8517892371417275 (change=84.17623891329619 %)
[2025-06-04 15:17:28] 2025-06-04 13:08:30,395 | INFO     | sum of square deviations: 8372156975.0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,398 | INFO     | sum of deviations: -12656429388.999994
[2025-06-04 15:17:28] 2025-06-04 13:08:30,399 | INFO     | mean x: 1749033148.5
[2025-06-04 15:17:28] 2025-06-04 13:08:30,399 | INFO     | mean y: 2520943.12
[2025-06-04 15:17:28] 2025-06-04 13:08:30,399 | INFO     | -- intersect: 2646584427.489939
[2025-06-04 15:17:28] 2025-06-04 13:08:30,399 | INFO     | intersect: 2646584427.489939
[2025-06-04 15:17:28] 2025-06-04 13:08:30,399 | INFO     | chi2: 0.13822231227585963
[2025-06-04 15:17:28] 2025-06-04 13:08:30,400 | INFO     | current chi2=0.13822231227585963 (change=83.77270969756793 %)
[2025-06-04 15:17:28] 2025-06-04 13:08:30,400 | INFO     | sum of square deviations: 7960484140.0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,403 | INFO     | sum of deviations: -14672911635.000002
[2025-06-04 15:17:28] 2025-06-04 13:08:30,403 | INFO     | mean x: 1749033301.0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,403 | INFO     | mean y: 2521677.481355932
[2025-06-04 15:17:28] 2025-06-04 13:08:30,403 | INFO     | -- intersect: 3226372214.823845
[2025-06-04 15:17:28] 2025-06-04 13:08:30,404 | INFO     | intersect: 3226372214.823845
[2025-06-04 15:17:28] 2025-06-04 13:08:30,404 | INFO     | chi2: 0.1257088352535522
[2025-06-04 15:17:28] 2025-06-04 13:08:30,404 | INFO     | current chi2=0.1257088352535522 (change=9.053152719174191 %)
[2025-06-04 15:17:28] 2025-06-04 13:08:30,404 | INFO     | left removable region: 30
[2025-06-04 15:17:28] 2025-06-04 13:08:30,405 | INFO     | sum of square deviations: 6378584712.5
[2025-06-04 15:17:28] 2025-06-04 13:08:30,407 | INFO     | sum of deviations: 14521431677.000002
[2025-06-04 15:17:28] 2025-06-04 13:08:30,407 | INFO     | mean x: 1749033575.5
[2025-06-04 15:17:28] 2025-06-04 13:08:30,408 | INFO     | mean y: 2509389.686131387
[2025-06-04 15:17:28] 2025-06-04 13:08:30,408 | INFO     | -- intersect: -3979325564.6461887
[2025-06-04 15:17:28] 2025-06-04 13:08:30,408 | INFO     | intersect: -3979325564.6461887
[2025-06-04 15:17:28] 2025-06-04 13:08:30,408 | INFO     | chi2: 0.0015391569859612695
[2025-06-04 15:17:28] 2025-06-04 13:08:30,408 | INFO     | -- intersect: -3979325564.6461887
[2025-06-04 15:17:28] 2025-06-04 13:08:30,409 | INFO     | current memory leak: 2.28 B/s (using 274 data points, chi2=0.00)
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | ..............................
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | . Timing measurements:
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | . get job = 0 s
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | . initial setup = 7 s
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | . payload setup = 179 s
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | . stage-in = 0 s
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | . payload execution = 19059 s
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | . stage-out = 88 s
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | . log creation = 1 s
[2025-06-04 15:17:28] 2025-06-04 13:08:30,410 | INFO     | ..............................
[2025-06-04 15:17:28] 2025-06-04 13:08:30,536 | INFO     | 
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | job summary report
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | --------------------------------------------------
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | PanDA job id: 6666011324
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | task id: 44871837
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | errors: (none)
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | pilot state: finished 
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | transexitcode: 0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | exeerrorcode: 0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | exeerrordiag: 
[2025-06-04 15:17:28] 2025-06-04 13:08:30,537 | INFO     | exitcode: 0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | exitmsg: OK
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | cpuconsumptiontime: 71821 s
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | nevents: 400
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | neventsw: 0
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | pid: 2064
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | pgrp: 2064
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | corecount: 8
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | event service: False
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | sizes: {0: 2405007, 1: 2405262, 12: 2405262, 23: 2405290, 34: 2405318, 44: 2405346, 55: 2405502, 66: 2405530, 77: 2405558, 87: 2405614, 91: 2405848, 98: 2406156, 1
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | --------------------------------------------------
[2025-06-04 15:17:28] 2025-06-04 13:08:30,538 | INFO     | 
[2025-06-04 15:17:28] 2025-06-04 13:08:30,539 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-06-04 15:17:28] 2025-06-04 13:08:30,999 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:30,999 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:30,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:30,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:30,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:30,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:30,999 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,000 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:17:28] 2025-06-04 13:08:31,001 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,001 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:17:28] 2025-06-04 13:08:31,001 | INFO     | job 6666011324 has completed (purged errors)
[2025-06-04 15:17:28] 2025-06-04 13:08:31,001 | INFO     | overall cleanup function is called
[2025-06-04 15:17:28] 2025-06-04 13:08:32,010 | INFO     | --- collectZombieJob: --- 10, [2064]
[2025-06-04 15:17:28] 2025-06-04 13:08:32,010 | INFO     | zombie collector waiting for pid 2064
[2025-06-04 15:17:28] 2025-06-04 13:08:32,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:17:28] 2025-06-04 13:08:32,011 | INFO     | collected zombie processes
[2025-06-04 15:17:28] 2025-06-04 13:08:32,011 | INFO     | will attempt to kill all subprocesses of pid=2064
[2025-06-04 15:17:28] 2025-06-04 13:08:32,131 | INFO     | process IDs to be killed: [2064] (in reverse order)
[2025-06-04 15:17:28] 2025-06-04 13:08:32,918 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:17:28] 2025-06-04 13:08:32,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:17:28] 2025-06-04 13:08:32,922 | INFO     | did not find any defunct processes belonging to 2064
[2025-06-04 15:17:28] 2025-06-04 13:08:32,932 | INFO     | did not find any defunct processes belonging to 2064
[2025-06-04 15:17:28] 2025-06-04 13:08:32,933 | INFO     | ready for new job
[2025-06-04 15:17:28] 2025-06-04 13:08:32,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:17:28] 2025-06-04 13:08:32,935 | INFO     | **************************************
[2025-06-04 15:17:28] 2025-06-04 13:08:32,935 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:17:28] 2025-06-04 13:08:32,936 | INFO     | **************************************
[2025-06-04 15:17:28] 2025-06-04 13:08:32,936 | INFO     | 
[2025-06-04 15:17:28] 2025-06-04 13:08:32,936 | INFO     | pilot is running in a VM
[2025-06-04 15:17:28] 2025-06-04 13:08:32,936 | INFO     | architecture information:
[2025-06-04 15:17:28] 2025-06-04 13:08:32,950 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:17:28] 2025-06-04 13:08:33,173 | INFO     | cat /etc/os-release:
[2025-06-04 15:17:28] NAME="CentOS Linux"
[2025-06-04 15:17:28] VERSION="7 (Core)"
[2025-06-04 15:17:28] ID="centos"
[2025-06-04 15:17:28] ID_LIKE="rhel fedora"
[2025-06-04 15:17:28] VERSION_ID="7"
[2025-06-04 15:17:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:17:28] ANSI_COLOR="0;31"
[2025-06-04 15:17:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:17:28] HOME_URL="https://www.centos.org/"
[2025-06-04 15:17:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:17:28] 
[2025-06-04 15:17:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:17:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:17:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:17:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:17:28] 
[2025-06-04 15:17:28] 2025-06-04 13:08:33,173 | INFO     | **************************************
[2025-06-04 15:17:28] 2025-06-04 13:08:33,677 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-06-04 15:17:28] 2025-06-04 13:08:33,964 | INFO     | sufficient remaining disk space (496836280320 B)
[2025-06-04 15:17:28] 2025-06-04 13:08:33,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:17:28] 2025-06-04 13:08:33,964 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:17:28] 2025-06-04 13:08:33,964 | INFO     | update_server=False
[2025-06-04 15:17:28] 2025-06-04 13:08:33,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:17:28] 2025-06-04 13:08:33,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:17:28] 2025-06-04 13:08:34,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:17:28] 2025-06-04 13:08:34,113 | INFO     | aborting loop
[2025-06-04 15:17:28] 2025-06-04 13:08:34,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:17:28] 2025-06-04 13:08:34,781 | INFO     | PID=25818 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 15:17:28] 2025-06-04 13:08:34,781 | INFO     | .. there are 9 such processes running
[2025-06-04 15:17:28] 2025-06-04 13:08:34,781 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:17:28] 2025-06-04 13:08:34,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:17:28] 2025-06-04 13:08:34,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:17:28] 2025-06-04 13:08:34,914 | INFO     | all data control threads have been joined
[2025-06-04 15:17:28] 2025-06-04 13:08:34,971 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:35,079 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:35,111 | INFO     | all job control threads have been joined
[2025-06-04 15:17:28] 2025-06-04 13:08:35,119 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:35,282 | INFO     | all payload control threads have been joined
[2025-06-04 15:17:28] 2025-06-04 13:08:35,439 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:35,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:35,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:17:28] 2025-06-04 13:08:35,920 | INFO     | [data] control thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:35,948 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:35,951 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:35,955 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:36,061 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:36,117 | INFO     | [job] control thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:36,180 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:36,288 | INFO     | [payload] control thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:36,409 | INFO     | [job] validate thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:36,557 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:37,974 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:17:28] 2025-06-04 13:08:39,216 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240100423488)>', '<ExcThread(monitor, started 140239515404032)>']
[2025-06-04 15:17:28] 2025-06-04 13:08:39,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:17:28] 2025-06-04 13:08:39,812 | INFO     | [monitor] control thread has ended
[2025-06-04 15:17:28] 2025-06-04 13:08:44,242 | INFO     | all workflow threads have been joined
[2025-06-04 15:17:28] 2025-06-04 13:08:44,242 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:17:28] 2025-06-04 13:08:44,243 | INFO     | traces error code: 0
[2025-06-04 15:17:28] 2025-06-04 13:08:44,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:17:28] 2025-06-04 13:08:44,539 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:17:28] 2025-06-04 13:08:44,592 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:17:28] 2025-06-04 13:08:44,693 [wrapper] pilotpid: 25818
[2025-06-04 15:17:28] 2025-06-04 13:08:44,790 [wrapper] Pilot exit status: 0
[2025-06-04 15:17:28] 2025-06-04 13:08:45,198 [wrapper] pandaids: 6666011324
[2025-06-04 15:17:28] 2025-06-04 13:08:46,006 [wrapper] cleanup supervisor_pilot  3348 25819
[2025-06-04 15:17:28] 2025-06-04 13:08:46,088 [wrapper] Test setup, not cleaning
[2025-06-04 15:17:28] 2025-06-04 13:08:46,157 [wrapper] apfmon messages muted
[2025-06-04 15:17:28] 2025-06-04 13:08:46,230 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:17:28] 2025-06-04 13:08:46,344 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:17:28]  *** Error codes and diagnostics ***
[2025-06-04 15:17:28]     "exeErrorCode": 0,
[2025-06-04 15:17:28]     "exeErrorDiag": "",
[2025-06-04 15:17:28]     "pilotErrorCode": 0,
[2025-06-04 15:17:28]     "pilotErrorDiag": "",
[2025-06-04 15:17:28]  *** Listing of results directory ***
[2025-06-04 15:17:28] total 422916
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc    495897 May 26 16:06 pilot3.tar.gz
[2025-06-04 15:17:28] -rwx------. 1 boinc boinc     37140 May 26 17:00 runpilot2-wrapper.sh
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc      5111 May 26 17:00 queuedata.json
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc       100 Jun  4 09:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:17:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 09:08 run_atlas
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc       105 Jun  4 09:08 job.xml
[2025-06-04 15:17:28] -rw-r--r--. 2 boinc boinc 227961019 Jun  4 09:08 EVNT.44871834._002100.pool.root.1
[2025-06-04 15:17:28] -rw-r--r--. 2 boinc boinc    508871 Jun  4 09:08 input.tar.gz
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc      6391 Jun  4 09:08 init_data.xml
[2025-06-04 15:17:28] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:08 start_atlas.sh
[2025-06-04 15:17:28] drwxrwx--x. 2 boinc boinc        68 Jun  4 09:08 shared
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc         0 Jun  4 09:08 boinc_lockfile
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc      2558 Jun  4 09:38 pandaJob.out
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc    986745 Jun  4 09:41 agis_schedconf.cvmfs.json
[2025-06-04 15:17:28] drwx------. 4 boinc boinc      4096 Jun  4 09:41 pilot3
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc 197101801 Jun  4 15:04 HITS.44871837._052799.pool.root.1
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc       531 Jun  4 15:04 boinc_task_state.xml
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc      1013 Jun  4 15:05 memory_monitor_summary.json
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc   1598969 Jun  4 15:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc    442724 Jun  4 15:06 log.44871837._052799.job.log.tgz.1
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc        95 Jun  4 15:08 pilot_heartbeat.json
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc      7689 Jun  4 15:08 heartbeat.json
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc      4809 Jun  4 15:08 pilotlog.txt
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc   1652081 Jun  4 15:08 log.44871837._052799.job.log.1
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc       357 Jun  4 15:08 output.list
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc       620 Jun  4 15:08 runtime_log
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc   2109440 Jun  4 15:08 result.tar.gz
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc      8673 Jun  4 15:08 runtime_log.err
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc       657 Jun  4 15:08 eNSLDmhUod7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIMQKDmB4kZXm.diag
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc      8192 Jun  4 15:17 boinc_mmap_file
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc        28 Jun  4 15:17 wrapper_checkpoint.txt
[2025-06-04 15:17:28] -rw-r--r--. 1 boinc boinc     20585 Jun  4 15:17 stderr.txt
[2025-06-04 15:17:28] HITS file was successfully produced:
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc 197101801 Jun  4 15:04 shared/HITS.pool.root.1
[2025-06-04 15:17:28]  *** Contents of shared directory: ***
[2025-06-04 15:17:28] total 417680
[2025-06-04 15:17:28] -rw-r--r--. 2 boinc boinc 227961019 Jun  4 09:08 ATLAS.root_0
[2025-06-04 15:17:28] -rw-r--r--. 2 boinc boinc    508871 Jun  4 09:08 input.tar.gz
[2025-06-04 15:17:28] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:08 start_atlas.sh
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc 197101801 Jun  4 15:04 HITS.pool.root.1
[2025-06-04 15:17:28] -rw-------. 1 boinc boinc   2109440 Jun  4 15:08 result.tar.gz
15:17:30 (4662): run_atlas exited; CPU time 72095.659614
15:17:30 (4662): called boinc_finish(0)

</stderr_txt>
]]>

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