Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:09:36 (1866025): wrapper (7.7.26015): starting
19:09:36 (1866025): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 19:09:36] Arguments: --nthreads 8
[2025-06-03 19:09:36] Threads: 8
[2025-06-03 19:09:36] Checking for CVMFS
[2025-06-03 19:09:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 19:09:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 19:09:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 19:09:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 19:09:36] 2.12.6.0 5613 540 74108 146760 0 200 27388781 40960001 5530 16776704 0 3535410 99.998 158747 49132 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 19:09:36] CVMFS is ok
[2025-06-03 19:09:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:09:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:09:36] Further information can be found at the LHC@home message board.
[2025-06-03 19:09:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:09:36] Checking for apptainer binary...
[2025-06-03 19:09:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 19:09:36] Running /usr/bin/apptainer --version
[2025-06-03 19:09:36] apptainer version 1.4.1-1.el9
[2025-06-03 19:09:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:09:36] c6-8-12-2.aglt2.org
[2025-06-03 19:09:36] apptainer works
[2025-06-03 19:09:36] Set ATHENA_PROC_NUMBER=8
[2025-06-03 19:09:36] Set ATHENA_CORE_NUMBER=8
[2025-06-03 19:09:36] Starting ATLAS job with PandaID=6677977947
[2025-06-03 19:09:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:32:30]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:32:30] 2025-06-04 03:32:14,461 | INFO     | sum of deviations: 139389326283.23645
[2025-06-03 23:32:30] 2025-06-04 03:32:14,461 | INFO     | mean x: 1749000051.0503876
[2025-06-03 23:32:30] 2025-06-04 03:32:14,461 | INFO     | mean y: 2051155.1356589147
[2025-06-03 23:32:30] 2025-06-04 03:32:14,461 | INFO     | -- intersect: -45787092799.16701
[2025-06-03 23:32:30] 2025-06-04 03:32:14,461 | INFO     | intersect: -45787092799.16701
[2025-06-03 23:32:30] 2025-06-04 03:32:14,462 | INFO     | chi2: 4.322613503186381
[2025-06-03 23:32:30] 2025-06-04 03:32:14,462 | INFO     | sum of square deviations: 5020630512.300405
[2025-06-03 23:32:30] 2025-06-04 03:32:14,464 | INFO     | sum of deviations: 135935918989.68382
[2025-06-03 23:32:30] 2025-06-04 03:32:14,464 | INFO     | mean x: 1748999898.5612648
[2025-06-03 23:32:30] 2025-06-04 03:32:14,464 | INFO     | mean y: 2049416.9881422925
[2025-06-03 23:32:30] 2025-06-04 03:32:14,464 | INFO     | -- intersect: -47352940746.35962
[2025-06-03 23:32:30] 2025-06-04 03:32:14,464 | INFO     | intersect: -47352940746.35962
[2025-06-03 23:32:30] 2025-06-04 03:32:14,464 | INFO     | chi2: 4.318855513043431
[2025-06-03 23:32:30] 2025-06-04 03:32:14,464 | INFO     | current chi2=4.318855513043431 (change=0.08693791707678494 %)
[2025-06-03 23:32:30] 2025-06-04 03:32:14,464 | INFO     | right removable region: 252
[2025-06-03 23:32:30] 2025-06-04 03:32:14,465 | INFO     | sum of square deviations: 5020543892.300405
[2025-06-03 23:32:30] 2025-06-04 03:32:14,466 | INFO     | sum of deviations: 84061217160.60474
[2025-06-03 23:32:30] 2025-06-04 03:32:14,466 | INFO     | mean x: 1749000203.5612648
[2025-06-03 23:32:30] 2025-06-04 03:32:14,466 | INFO     | mean y: 2078890.7351778657
[2025-06-03 23:32:30] 2025-06-04 03:32:14,467 | INFO     | -- intersect: -29282215615.878456
[2025-06-03 23:32:30] 2025-06-04 03:32:14,467 | INFO     | intersect: -29282215615.878456
[2025-06-03 23:32:30] 2025-06-04 03:32:14,467 | INFO     | chi2: 1.7701888254726423
[2025-06-03 23:32:30] 2025-06-04 03:32:14,467 | INFO     | current chi2=1.7701888254726423 (change=59.04818175005096 %)
[2025-06-03 23:32:30] 2025-06-04 03:32:14,467 | INFO     | sum of square deviations: 4728625340.693571
[2025-06-03 23:32:30] 2025-06-04 03:32:14,469 | INFO     | sum of deviations: 45827496449.459694
[2025-06-03 23:32:30] 2025-06-04 03:32:14,469 | INFO     | mean x: 1749000356.0725806
[2025-06-03 23:32:30] 2025-06-04 03:32:14,469 | INFO     | mean y: 2098845.1411290322
[2025-06-03 23:32:30] 2025-06-04 03:32:14,469 | INFO     | -- intersect: -16948346967.988905
[2025-06-03 23:32:30] 2025-06-04 03:32:14,469 | INFO     | intersect: -16948346967.988905
[2025-06-03 23:32:30] 2025-06-04 03:32:14,470 | INFO     | chi2: 0.65993790501775
[2025-06-03 23:32:30] 2025-06-04 03:32:14,470 | INFO     | current chi2=0.65993790501775 (change=62.719349737079845 %)
[2025-06-03 23:32:30] 2025-06-04 03:32:14,470 | INFO     | sum of square deviations: 4448241889.020556
[2025-06-03 23:32:30] 2025-06-04 03:32:14,472 | INFO     | sum of deviations: 24630428796.111103
[2025-06-03 23:32:30] 2025-06-04 03:32:14,472 | INFO     | mean x: 1749000508.584362
[2025-06-03 23:32:30] 2025-06-04 03:32:14,472 | INFO     | mean y: 2110334.5555555555
[2025-06-03 23:32:30] 2025-06-04 03:32:14,472 | INFO     | -- intersect: -9682307367.048925
[2025-06-03 23:32:30] 2025-06-04 03:32:14,472 | INFO     | intersect: -9682307367.048925
[2025-06-03 23:32:30] 2025-06-04 03:32:14,473 | INFO     | chi2: 0.3000711079927443
[2025-06-03 23:32:30] 2025-06-04 03:32:14,473 | INFO     | current chi2=0.3000711079927443 (change=54.53040267710135 %)
[2025-06-03 23:32:30] 2025-06-04 03:32:14,473 | INFO     | sum of square deviations: 4179190743.147055
[2025-06-03 23:32:30] 2025-06-04 03:32:14,475 | INFO     | sum of deviations: 18270846955.735294
[2025-06-03 23:32:30] 2025-06-04 03:32:14,475 | INFO     | mean x: 1749000661.0882354
[2025-06-03 23:32:30] 2025-06-04 03:32:14,476 | INFO     | mean y: 2113922.155462185
[2025-06-03 23:32:30] 2025-06-04 03:32:14,476 | INFO     | -- intersect: -7644276340.510412
[2025-06-03 23:32:30] 2025-06-04 03:32:14,476 | INFO     | intersect: -7644276340.510412
[2025-06-03 23:32:30] 2025-06-04 03:32:14,476 | INFO     | chi2: 0.26895588594403264
[2025-06-03 23:32:30] 2025-06-04 03:32:14,476 | INFO     | current chi2=0.26895588594403264 (change=10.369282886596336 %)
[2025-06-03 23:32:30] 2025-06-04 03:32:14,477 | INFO     | left removable region: 40
[2025-06-03 23:32:30] 2025-06-04 03:32:14,477 | INFO     | sum of square deviations: 2953711678.957552
[2025-06-03 23:32:30] 2025-06-04 03:32:14,478 | INFO     | sum of deviations: 16723462304.297165
[2025-06-03 23:32:30] 2025-06-04 03:32:14,479 | INFO     | mean x: 1749001088.0141509
[2025-06-03 23:32:30] 2025-06-04 03:32:14,479 | INFO     | mean y: 2112773.900943396
[2025-06-03 23:32:30] 2025-06-04 03:32:14,479 | INFO     | -- intersect: -9900463017.078865
[2025-06-03 23:32:30] 2025-06-04 03:32:14,479 | INFO     | intersect: -9900463017.078865
[2025-06-03 23:32:30] 2025-06-04 03:32:14,479 | INFO     | chi2: 0.24688760501752835
[2025-06-03 23:32:30] 2025-06-04 03:32:14,479 | INFO     | -- intersect: -9900463017.078865
[2025-06-03 23:32:30] 2025-06-04 03:32:14,480 | INFO     | current memory leak: 5.66 B/s (using 212 data points, chi2=0.25)
[2025-06-03 23:32:30] 2025-06-04 03:32:14,480 | INFO     | ..............................
[2025-06-03 23:32:30] 2025-06-04 03:32:14,480 | INFO     | . Timing measurements:
[2025-06-03 23:32:30] 2025-06-04 03:32:14,480 | INFO     | . get job = 0 s
[2025-06-03 23:32:30] 2025-06-04 03:32:14,480 | INFO     | . initial setup = 2 s
[2025-06-03 23:32:30] 2025-06-04 03:32:14,480 | INFO     | . payload setup = 6 s
[2025-06-03 23:32:30] 2025-06-04 03:32:14,481 | INFO     | . stage-in = 0 s
[2025-06-03 23:32:30] 2025-06-04 03:32:14,481 | INFO     | . payload execution = 15711 s
[2025-06-03 23:32:30] 2025-06-04 03:32:14,481 | INFO     | . stage-out = 2 s
[2025-06-03 23:32:30] 2025-06-04 03:32:14,481 | INFO     | . log creation = 0 s
[2025-06-03 23:32:30] 2025-06-04 03:32:14,481 | INFO     | ..............................
[2025-06-03 23:32:30] 2025-06-04 03:32:15,007 | INFO     | 
[2025-06-03 23:32:30] 2025-06-04 03:32:15,007 | INFO     | job summary report
[2025-06-03 23:32:30] 2025-06-04 03:32:15,007 | INFO     | --------------------------------------------------
[2025-06-03 23:32:30] 2025-06-04 03:32:15,007 | INFO     | PanDA job id: 6677977947
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | task id: 45006595
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | errors: (none)
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | pilot state: finished 
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | transexitcode: 0
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | exeerrorcode: 0
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | exeerrordiag: 
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | exitcode: 0
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | exitmsg: OK
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | cpuconsumptiontime: 36330 s
[2025-06-03 23:32:30] 2025-06-04 03:32:15,008 | INFO     | nevents: 400
[2025-06-03 23:32:30] 2025-06-04 03:32:15,009 | INFO     | neventsw: 0
[2025-06-03 23:32:30] 2025-06-04 03:32:15,009 | INFO     | pid: 1890647
[2025-06-03 23:32:30] 2025-06-04 03:32:15,009 | INFO     | pgrp: 1890647
[2025-06-03 23:32:30] 2025-06-04 03:32:15,009 | INFO     | corecount: 8
[2025-06-03 23:32:30] 2025-06-04 03:32:15,009 | INFO     | event service: False
[2025-06-03 23:32:30] 2025-06-04 03:32:15,009 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 15722: 2436512, 15726: 2445453, 15729: 2445509, 15734: 2445807}
[2025-06-03 23:32:30] 2025-06-04 03:32:15,009 | INFO     | --------------------------------------------------
[2025-06-03 23:32:30] 2025-06-04 03:32:15,009 | INFO     | 
[2025-06-03 23:32:30] 2025-06-04 03:32:15,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-03 23:32:30] 2025-06-04 03:32:15,027 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,028 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,028 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:32:30] 2025-06-04 03:32:15,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:32:30] 2025-06-04 03:32:15,030 | INFO     | job 6677977947 has completed (purged errors)
[2025-06-03 23:32:30] 2025-06-04 03:32:15,030 | INFO     | overall cleanup function is called
[2025-06-03 23:32:30] 2025-06-04 03:32:16,039 | INFO     | --- collectZombieJob: --- 10, [1890647]
[2025-06-03 23:32:30] 2025-06-04 03:32:16,040 | INFO     | zombie collector waiting for pid 1890647
[2025-06-03 23:32:30] 2025-06-04 03:32:16,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:32:30] 2025-06-04 03:32:16,040 | INFO     | collected zombie processes
[2025-06-03 23:32:30] 2025-06-04 03:32:16,041 | INFO     | will attempt to kill all subprocesses of pid=1890647
[2025-06-03 23:32:30] 2025-06-04 03:32:16,327 | INFO     | process IDs to be killed: [1890647] (in reverse order)
[2025-06-03 23:32:30] 2025-06-04 03:32:16,435 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:32:30] 2025-06-04 03:32:16,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:32:30] 2025-06-04 03:32:16,447 | INFO     | did not find any defunct processes belonging to 1890647
[2025-06-03 23:32:30] 2025-06-04 03:32:16,458 | INFO     | did not find any defunct processes belonging to 1890647
[2025-06-03 23:32:30] 2025-06-04 03:32:16,458 | INFO     | ready for new job
[2025-06-03 23:32:30] 2025-06-04 03:32:16,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:32:30] 2025-06-04 03:32:16,460 | INFO     | **************************************
[2025-06-03 23:32:30] 2025-06-04 03:32:16,460 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:32:30] 2025-06-04 03:32:16,460 | INFO     | **************************************
[2025-06-03 23:32:30] 2025-06-04 03:32:16,460 | INFO     | 
[2025-06-03 23:32:30] 2025-06-04 03:32:16,475 | INFO     | architecture information:
[2025-06-03 23:32:30] 2025-06-04 03:32:16,476 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:32:30] 2025-06-04 03:32:16,489 | INFO     | cat /etc/os-release:
[2025-06-03 23:32:30] NAME="CentOS Linux"
[2025-06-03 23:32:30] VERSION="7 (Core)"
[2025-06-03 23:32:30] ID="centos"
[2025-06-03 23:32:30] ID_LIKE="rhel fedora"
[2025-06-03 23:32:30] VERSION_ID="7"
[2025-06-03 23:32:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:32:30] ANSI_COLOR="0;31"
[2025-06-03 23:32:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:32:30] HOME_URL="https://www.centos.org/"
[2025-06-03 23:32:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:32:30] 
[2025-06-03 23:32:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:32:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:32:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:32:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:32:30] 
[2025-06-03 23:32:30] 2025-06-04 03:32:16,489 | INFO     | **************************************
[2025-06-03 23:32:30] 2025-06-04 03:32:16,992 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-03 23:32:30] 2025-06-04 03:32:17,007 | INFO     | sufficient remaining disk space (56302239744 B)
[2025-06-03 23:32:30] 2025-06-04 03:32:17,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:32:30] 2025-06-04 03:32:17,008 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:32:30] 2025-06-04 03:32:17,008 | INFO     | update_server=False
[2025-06-03 23:32:30] 2025-06-04 03:32:17,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:32:30] 2025-06-04 03:32:17,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:32:30] 2025-06-04 03:32:17,009 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 23:32:30] 2025-06-04 03:32:17,009 | INFO     | aborting loop
[2025-06-03 23:32:30] 2025-06-04 03:32:17,009 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:32:30] 2025-06-04 03:32:17,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:32:30] 2025-06-04 03:32:17,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:32:30] 2025-06-04 03:32:17,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:32:30] 2025-06-04 03:32:17,586 | INFO     | all job control threads have been joined
[2025-06-03 23:32:30] 2025-06-04 03:32:17,716 | INFO     | all data control threads have been joined
[2025-06-03 23:32:30] 2025-06-04 03:32:18,013 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:18,014 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:18,074 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:18,288 | INFO     | all payload control threads have been joined
[2025-06-03 23:32:30] 2025-06-04 03:32:18,409 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:18,584 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:18,591 | INFO     | [job] control thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:18,721 | INFO     | [data] control thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:18,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:18,846 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:19,051 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:19,100 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:19,214 | INFO     | [job] validate thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:19,293 | INFO     | [payload] control thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:19,559 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:19,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:32:30] 2025-06-04 03:32:20,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:32:30] 2025-06-04 03:32:20,580 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:24,259 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:32:30] 2025-06-04 03:32:25,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577995896640)>', '<ExcThread(monitor, started 140577714702080)>']
[2025-06-03 23:32:30] 2025-06-04 03:32:26,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:32:30] 2025-06-04 03:32:26,050 | INFO     | [monitor] control thread has ended
[2025-06-03 23:32:30] 2025-06-04 03:32:30,436 | INFO     | all workflow threads have been joined
[2025-06-03 23:32:30] 2025-06-04 03:32:30,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:32:30] 2025-06-04 03:32:30,437 | INFO     | traces error code: 0
[2025-06-03 23:32:30] 2025-06-04 03:32:30,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:32:30] 2025-06-04 03:32:30,612 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:32:30] 2025-06-04 03:32:30,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:32:30] 2025-06-04 03:32:30,618 [wrapper] pilotpid: 1872508
[2025-06-03 23:32:30] 2025-06-04 03:32:30,620 [wrapper] Pilot exit status: 0
[2025-06-03 23:32:30] 2025-06-04 03:32:30,631 [wrapper] pandaids: 6677977947
[2025-06-03 23:32:30] 2025-06-04 03:32:30,703 [wrapper] cleanup supervisor_pilot 2991961 1872509
[2025-06-03 23:32:30] 2025-06-04 03:32:30,706 [wrapper] Test setup, not cleaning
[2025-06-03 23:32:30] 2025-06-04 03:32:30,709 [wrapper] apfmon messages muted
[2025-06-03 23:32:30] 2025-06-04 03:32:30,712 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:32:30] 2025-06-04 03:32:30,715 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:32:30]  *** Error codes and diagnostics ***
[2025-06-03 23:32:30]     "exeErrorCode": 0,
[2025-06-03 23:32:30]     "exeErrorDiag": "",
[2025-06-03 23:32:30]     "pilotErrorCode": 0,
[2025-06-03 23:32:30]     "pilotErrorDiag": "",
[2025-06-03 23:32:30]  *** Listing of results directory ***
[2025-06-03 23:32:30] total 393116
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 23:32:30] -rwx------. 1 boincer umatlas     37140 Jun  3 15:18 runpilot2-wrapper.sh
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:18 queuedata.json
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas       100 Jun  3 19:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:32:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 19:09 run_atlas
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas       105 Jun  3 19:09 job.xml
[2025-06-03 23:32:30] -rw-r--r--. 2 boincer umatlas 215503079 Jun  3 19:09 EVNT.45006593._001751.pool.root.1
[2025-06-03 23:32:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 19:09 start_atlas.sh
[2025-06-03 23:32:30] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 19:09 shared
[2025-06-03 23:32:30] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 19:09 input.tar.gz
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas         0 Jun  3 19:09 boinc_lockfile
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 19:09 pandaJob.out
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas    986861 Jun  3 19:09 agis_schedconf.cvmfs.json
[2025-06-03 23:32:30] drwx------. 4 boincer umatlas      4096 Jun  3 19:09 pilot3
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas      6841 Jun  3 23:30 init_data.xml
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas 179821536 Jun  3 23:31 HITS.45006595._043677.pool.root.1
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas       529 Jun  3 23:31 boinc_task_state.xml
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas      1039 Jun  3 23:31 memory_monitor_summary.json
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas        95 Jun  3 23:32 pilot_heartbeat.json
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas   1603667 Jun  3 23:32 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas    395731 Jun  3 23:32 log.45006595._043677.job.log.tgz.1
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas      7715 Jun  3 23:32 heartbeat.json
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas        27 Jun  3 23:32 wrapper_checkpoint.txt
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas      4476 Jun  3 23:32 pilotlog.txt
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas   1300300 Jun  3 23:32 log.45006595._043677.job.log.1
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 23:32 boinc_mmap_file
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas       357 Jun  3 23:32 output.list
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas       620 Jun  3 23:32 runtime_log
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas   1710080 Jun  3 23:32 result.tar.gz
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas      8665 Jun  3 23:32 runtime_log.err
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas       657 Jun  3 23:32 i1pMDmwKmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6slKDmohBMem.diag
[2025-06-03 23:32:30] -rw-r--r--. 1 boincer umatlas     20833 Jun  3 23:32 stderr.txt
[2025-06-03 23:32:30] HITS file was successfully produced:
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas 179821536 Jun  3 23:31 shared/HITS.pool.root.1
[2025-06-03 23:32:30]  *** Contents of shared directory: ***
[2025-06-03 23:32:30] total 388260
[2025-06-03 23:32:30] -rw-r--r--. 2 boincer umatlas 215503079 Jun  3 19:09 ATLAS.root_0
[2025-06-03 23:32:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 19:09 start_atlas.sh
[2025-06-03 23:32:30] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 19:09 input.tar.gz
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas 179821536 Jun  3 23:31 HITS.pool.root.1
[2025-06-03 23:32:30] -rw-------. 1 boincer umatlas   1710080 Jun  3 23:32 result.tar.gz
23:32:52 (1866025): run_atlas exited; CPU time 36885.219332
23:32:52 (1866025): called boinc_finish(0)

</stderr_txt>
]]>

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