Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:08:40 (2093444): wrapper (7.7.26015): starting
19:08:40 (2093444): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 19:08:40] Arguments: --nthreads 10
[2025-06-03 19:08:40] Threads: 10
[2025-06-03 19:08:40] Checking for CVMFS
[2025-06-03 19:08:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 19:08:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 19:08:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 19:08:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 19:08:41] 2.12.6.0 709574 219959 319124 146760 3 262 31762595 32935937 12520 130560 1 367978350 99.640 358175134 26921 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 19:08:41] CVMFS is ok
[2025-06-03 19:08:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:08:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:08:41] Further information can be found at the LHC@home message board.
[2025-06-03 19:08:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:08:41] Checking for apptainer binary...
[2025-06-03 19:08:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 19:08:41] Running /usr/bin/apptainer --version
[2025-06-03 19:08:41] apptainer version 1.4.1-1.el9
[2025-06-03 19:08:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:08:41] c-5-6.aglt2.org
[2025-06-03 19:08:41] apptainer works
[2025-06-03 19:08:41] Set ATHENA_PROC_NUMBER=10
[2025-06-03 19:08:41] Set ATHENA_CORE_NUMBER=10
[2025-06-03 19:08:41] Starting ATLAS job with PandaID=6677976044
[2025-06-03 19:08:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:34:06]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:34:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 20:34:06]  is_altstaged=None
[2025-06-03 20:34:06]  is_tar=False
[2025-06-03 20:34:06]  lfn=log.45006595._043019.job.log.tgz.1
[2025-06-03 20:34:06]  mtime=0
[2025-06-03 20:34:06]  protocol_id=None
[2025-06-03 20:34:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 20:34:06]  replicas=None
[2025-06-03 20:34:06]  scope=mc23_13p6TeV
[2025-06-03 20:34:06]  status=None
[2025-06-03 20:34:06]  status_code=0
[2025-06-03 20:34:06]  storage_token=
[2025-06-03 20:34:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677976044/log.45006595._043019.job.log.tgz.1
[2025-06-03 20:34:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/b3/log.45006595._043019.job.log.tgz.1
[2025-06-03 20:34:06]  workdir=None
[2025-06-03 20:34:06] ]
[2025-06-03 20:34:06] 2025-06-04 00:33:40,473 | INFO     | transferring file log.45006595._043019.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677976044/log.45006595._043019.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 20:34:06] 2025-06-04 00:33:40,473 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677976044/log.45006595._043019.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._043019.job
[2025-06-03 20:34:06] 2025-06-04 00:33:40,493 | INFO     | adding to output.list: log.45006595._043019.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/b3/log.45006595._043019.job.log.tg
[2025-06-03 20:34:06] 2025-06-04 00:33:40,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 20:34:06] 2025-06-04 00:33:40,495 | INFO     | summary of transferred files:
[2025-06-03 20:34:06] 2025-06-04 00:33:40,495 | INFO     |  -- lfn=log.45006595._043019.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 20:34:06] 2025-06-04 00:33:40,495 | INFO     | stage-out finished correctly
[2025-06-03 20:34:06] 2025-06-04 00:33:40,812 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 20:34:06] 2025-06-04 00:33:40,917 | INFO     | job 6677976044 has state=finished
[2025-06-03 20:34:06] 2025-06-04 00:33:40,917 | INFO     | preparing for final server update for job 6677976044 in state='finished'
[2025-06-03 20:34:06] 2025-06-04 00:33:40,918 | INFO     | this job has now completed (state=finished)
[2025-06-03 20:34:06] 2025-06-04 00:33:40,918 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 20:34:06] 2025-06-04 00:33:40,918 | INFO     | log transfer has been attempted: DONE
[2025-06-03 20:34:06] 2025-06-04 00:33:40,918 | INFO     | job 6677976044 has finished - writing final server update
[2025-06-03 20:34:06] 2025-06-04 00:33:40,918 | INFO     | total number of processed events: 400 (read)
[2025-06-03 20:34:06] 2025-06-04 00:33:40,933 | INFO     | executing command: lscpu
[2025-06-03 20:34:06] 2025-06-04 00:33:40,992 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 20:34:06] 2025-06-04 00:33:42,561 | INFO     | monitor loop #372: job 0:6677976044 is in state 'finished'
[2025-06-03 20:34:06] 2025-06-04 00:33:42,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:34:06] 2025-06-04 00:33:45,064 | INFO     | monitor loop #373: job 0:6677976044 is in state 'finished'
[2025-06-03 20:34:06] 2025-06-04 00:33:45,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:34:06] 2025-06-04 00:33:45,097 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 20:34:06] 2025-06-04 00:33:45,097 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976044/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:34:06] 2025-06-04 00:33:45,098 | INFO     | extracted standard info from prmon json
[2025-06-03 20:34:06] 2025-06-04 00:33:45,099 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:34:06] 2025-06-04 00:33:45,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:34:06] 2025-06-04 00:33:45,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:34:06] 2025-06-04 00:33:45,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:34:06] 2025-06-04 00:33:45,101 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:34:06] 2025-06-04 00:33:45,102 | INFO     | sum of square deviations: 136095575.0
[2025-06-03 20:34:06] 2025-06-04 00:33:45,102 | INFO     | sum of deviations: 11827898688.5
[2025-06-03 20:34:06] 2025-06-04 00:33:45,102 | INFO     | mean x: 1748994751.5
[2025-06-03 20:34:06] 2025-06-04 00:33:45,102 | INFO     | mean y: 2405239.25
[2025-06-03 20:34:06] 2025-06-04 00:33:45,103 | INFO     | -- intersect: -152000573016.73102
[2025-06-03 20:34:06] 2025-06-04 00:33:45,103 | INFO     | intersect: -152000573016.73102
[2025-06-03 20:34:06] 2025-06-04 00:33:45,103 | INFO     | chi2: 1.2316758708254272
[2025-06-03 20:34:06] 2025-06-04 00:33:45,103 | INFO     | -- intersect: -152000573016.73102
[2025-06-03 20:34:06] 2025-06-04 00:33:45,103 | INFO     | current memory leak: 86.91 B/s (using 76 data points, chi2=1.23)
[2025-06-03 20:34:06] 2025-06-04 00:33:45,104 | INFO     | ..............................
[2025-06-03 20:34:06] 2025-06-04 00:33:45,104 | INFO     | . Timing measurements:
[2025-06-03 20:34:06] 2025-06-04 00:33:45,104 | INFO     | . get job = 0 s
[2025-06-03 20:34:06] 2025-06-04 00:33:45,104 | INFO     | . initial setup = 2 s
[2025-06-03 20:34:06] 2025-06-04 00:33:45,104 | INFO     | . payload setup = 6 s
[2025-06-03 20:34:06] 2025-06-04 00:33:45,104 | INFO     | . stage-in = 0 s
[2025-06-03 20:34:06] 2025-06-04 00:33:45,104 | INFO     | . payload execution = 5060 s
[2025-06-03 20:34:06] 2025-06-04 00:33:45,104 | INFO     | . stage-out = 1 s
[2025-06-03 20:34:06] 2025-06-04 00:33:45,104 | INFO     | . log creation = 0 s
[2025-06-03 20:34:06] 2025-06-04 00:33:45,105 | INFO     | ..............................
[2025-06-03 20:34:06] 2025-06-04 00:33:45,213 | INFO     | 
[2025-06-03 20:34:06] 2025-06-04 00:33:45,213 | INFO     | job summary report
[2025-06-03 20:34:06] 2025-06-04 00:33:45,213 | INFO     | --------------------------------------------------
[2025-06-03 20:34:06] 2025-06-04 00:33:45,213 | INFO     | PanDA job id: 6677976044
[2025-06-03 20:34:06] 2025-06-04 00:33:45,213 | INFO     | task id: 45006595
[2025-06-03 20:34:06] 2025-06-04 00:33:45,213 | INFO     | errors: (none)
[2025-06-03 20:34:06] 2025-06-04 00:33:45,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | pilot state: finished 
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | transexitcode: 0
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | exeerrorcode: 0
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | exeerrordiag: 
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | exitcode: 0
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | exitmsg: OK
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | cpuconsumptiontime: 41956 s
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | nevents: 400
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | neventsw: 0
[2025-06-03 20:34:06] 2025-06-04 00:33:45,214 | INFO     | pid: 2105515
[2025-06-03 20:34:06] 2025-06-04 00:33:45,215 | INFO     | pgrp: 2105515
[2025-06-03 20:34:06] 2025-06-04 00:33:45,215 | INFO     | corecount: 10
[2025-06-03 20:34:06] 2025-06-04 00:33:45,215 | INFO     | event service: False
[2025-06-03 20:34:06] 2025-06-04 00:33:45,215 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 5070: 2431529, 5071: 2431528, 5072: 2440525, 5073: 2440709, 5077: 2440879}
[2025-06-03 20:34:06] 2025-06-04 00:33:45,215 | INFO     | --------------------------------------------------
[2025-06-03 20:34:06] 2025-06-04 00:33:45,215 | INFO     | 
[2025-06-03 20:34:06] 2025-06-04 00:33:45,215 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 20:34:06] 2025-06-04 00:33:45,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,237 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:34:06] 2025-06-04 00:33:45,238 | INFO     | job 6677976044 has completed (purged errors)
[2025-06-03 20:34:06] 2025-06-04 00:33:45,239 | INFO     | overall cleanup function is called
[2025-06-03 20:34:06] 2025-06-04 00:33:46,247 | INFO     | --- collectZombieJob: --- 10, [2105515]
[2025-06-03 20:34:06] 2025-06-04 00:33:46,247 | INFO     | zombie collector waiting for pid 2105515
[2025-06-03 20:34:06] 2025-06-04 00:33:46,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:34:06] 2025-06-04 00:33:46,248 | INFO     | collected zombie processes
[2025-06-03 20:34:06] 2025-06-04 00:33:46,248 | INFO     | will attempt to kill all subprocesses of pid=2105515
[2025-06-03 20:34:06] 2025-06-04 00:33:46,590 | INFO     | process IDs to be killed: [2105515] (in reverse order)
[2025-06-03 20:34:06] 2025-06-04 00:33:46,686 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:34:06] 2025-06-04 00:33:46,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:34:06] 2025-06-04 00:33:46,699 | INFO     | did not find any defunct processes belonging to 2105515
[2025-06-03 20:34:06] 2025-06-04 00:33:46,712 | INFO     | did not find any defunct processes belonging to 2105515
[2025-06-03 20:34:06] 2025-06-04 00:33:46,712 | INFO     | ready for new job
[2025-06-03 20:34:06] 2025-06-04 00:33:46,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:34:06] 2025-06-04 00:33:46,714 | INFO     | **************************************
[2025-06-03 20:34:06] 2025-06-04 00:33:46,714 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:34:06] 2025-06-04 00:33:46,714 | INFO     | **************************************
[2025-06-03 20:34:06] 2025-06-04 00:33:46,715 | INFO     | 
[2025-06-03 20:34:06] 2025-06-04 00:33:46,729 | INFO     | architecture information:
[2025-06-03 20:34:06] 2025-06-04 00:33:46,729 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:34:06] 2025-06-04 00:33:46,745 | INFO     | cat /etc/os-release:
[2025-06-03 20:34:06] NAME="CentOS Linux"
[2025-06-03 20:34:06] VERSION="7 (Core)"
[2025-06-03 20:34:06] ID="centos"
[2025-06-03 20:34:06] ID_LIKE="rhel fedora"
[2025-06-03 20:34:06] VERSION_ID="7"
[2025-06-03 20:34:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:34:06] ANSI_COLOR="0;31"
[2025-06-03 20:34:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:34:06] HOME_URL="https://www.centos.org/"
[2025-06-03 20:34:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:34:06] 
[2025-06-03 20:34:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:34:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:34:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:34:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:34:06] 
[2025-06-03 20:34:06] 2025-06-04 00:33:46,745 | INFO     | **************************************
[2025-06-03 20:34:06] 2025-06-04 00:33:47,248 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 20:34:06] 2025-06-04 00:33:47,265 | INFO     | sufficient remaining disk space (76519833600 B)
[2025-06-03 20:34:06] 2025-06-04 00:33:47,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:34:06] 2025-06-04 00:33:47,266 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:34:06] 2025-06-04 00:33:47,266 | INFO     | update_server=False
[2025-06-03 20:34:06] 2025-06-04 00:33:47,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:34:06] 2025-06-04 00:33:47,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:34:06] 2025-06-04 00:33:47,267 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 20:34:06] 2025-06-04 00:33:47,267 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:34:06] 2025-06-04 00:33:47,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:34:06] 2025-06-04 00:33:47,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:34:06] 2025-06-04 00:33:47,567 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 20:34:06] 2025-06-04 00:33:47,567 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 20:34:06] 2025-06-04 00:33:47,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:34:06] 2025-06-04 00:33:47,567 | INFO     | will abort loop
[2025-06-03 20:34:06] 2025-06-04 00:33:48,189 | INFO     | all data control threads have been joined
[2025-06-03 20:34:06] 2025-06-04 00:33:48,269 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:48,327 | INFO     | all payload control threads have been joined
[2025-06-03 20:34:06] 2025-06-04 00:33:48,552 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:48,572 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:48,593 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:48,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:34:06] 2025-06-04 00:33:48,890 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:48,915 | INFO     | all job control threads have been joined
[2025-06-03 20:34:06] 2025-06-04 00:33:48,921 | INFO     | [job] validate thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:49,094 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:49,194 | INFO     | [data] control thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:49,332 | INFO     | [payload] control thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:49,507 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:49,820 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:49,916 | INFO     | [job] control thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:50,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:34:06] 2025-06-04 00:33:50,621 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:51,227 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:51,271 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:33:57,842 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:34:06] 2025-06-04 00:33:58,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:34:06] 2025-06-04 00:34:00,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328699905856)>', '<ExcThread(monitor, started 140327847454464)>']
[2025-06-03 20:34:06] 2025-06-04 00:34:01,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:34:06] 2025-06-04 00:34:01,326 | INFO     | [monitor] control thread has ended
[2025-06-03 20:34:06] 2025-06-04 00:34:05,845 | INFO     | all workflow threads have been joined
[2025-06-03 20:34:06] 2025-06-04 00:34:05,845 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:34:06] 2025-06-04 00:34:05,845 | INFO     | traces error code: 0
[2025-06-03 20:34:06] 2025-06-04 00:34:05,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:34:06] 2025-06-04 00:34:06,022 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:34:06] 2025-06-04 00:34:06,025 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:34:06] 2025-06-04 00:34:06,027 [wrapper] pilotpid: 2097043
[2025-06-03 20:34:06] 2025-06-04 00:34:06,030 [wrapper] Pilot exit status: 0
[2025-06-03 20:34:06] 2025-06-04 00:34:06,040 [wrapper] pandaids: 6677976044
[2025-06-03 20:34:06] 2025-06-04 00:34:06,113 [wrapper] cleanup supervisor_pilot 2377797 2097044
[2025-06-03 20:34:06] 2025-06-04 00:34:06,116 [wrapper] Test setup, not cleaning
[2025-06-03 20:34:06] 2025-06-04 00:34:06,119 [wrapper] apfmon messages muted
[2025-06-03 20:34:06] 2025-06-04 00:34:06,122 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:34:06] 2025-06-04 00:34:06,125 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:34:06]  *** Error codes and diagnostics ***
[2025-06-03 20:34:06]     "exeErrorCode": 0,
[2025-06-03 20:34:06]     "exeErrorDiag": "",
[2025-06-03 20:34:06]     "pilotErrorCode": 0,
[2025-06-03 20:34:06]     "pilotErrorDiag": "",
[2025-06-03 20:34:06]  *** Listing of results directory ***
[2025-06-03 20:34:06] total 388900
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:02 queuedata.json
[2025-06-03 20:34:06] -rwx------. 1 boincer umatlas     37140 Jun  3 15:03 runpilot2-wrapper.sh
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas       100 Jun  3 19:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:34:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 19:08 run_atlas
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas       105 Jun  3 19:08 job.xml
[2025-06-03 20:34:06] -rw-r--r--. 2 boincer umatlas 217085994 Jun  3 19:08 EVNT.45006593._001724.pool.root.1
[2025-06-03 20:34:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 19:08 start_atlas.sh
[2025-06-03 20:34:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 19:08 shared
[2025-06-03 20:34:06] -rw-r--r--. 2 boincer umatlas    508887 Jun  3 19:08 input.tar.gz
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas         0 Jun  3 19:08 boinc_lockfile
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 19:08 pandaJob.out
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas    986861 Jun  3 19:08 agis_schedconf.cvmfs.json
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas   1603667 Jun  3 19:08 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:34:06] drwx------. 4 boincer umatlas      4096 Jun  3 19:08 pilot3
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas      6671 Jun  3 20:31 init_data.xml
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas 175615063 Jun  3 20:33 HITS.45006595._043019.pool.root.1
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas       529 Jun  3 20:33 boinc_task_state.xml
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas      1037 Jun  3 20:33 memory_monitor_summary.json
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 20:33 boinc_mmap_file
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas        27 Jun  3 20:33 wrapper_checkpoint.txt
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas    355303 Jun  3 20:33 log.45006595._043019.job.log.tgz.1
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas      7709 Jun  3 20:33 heartbeat.json
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas        95 Jun  3 20:33 pilot_heartbeat.json
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas      4734 Jun  3 20:34 pilotlog.txt
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas    495009 Jun  3 20:34 log.45006595._043019.job.log.1
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas       357 Jun  3 20:34 output.list
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas       620 Jun  3 20:34 runtime_log
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas    870400 Jun  3 20:34 result.tar.gz
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas       650 Jun  3 20:34 yufMDmS6lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAplKDmJa4dCn.diag
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas      8646 Jun  3 20:34 runtime_log.err
[2025-06-03 20:34:06] -rw-r--r--. 1 boincer umatlas     21348 Jun  3 20:34 stderr.txt
[2025-06-03 20:34:06] HITS file was successfully produced:
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas 175615063 Jun  3 20:33 shared/HITS.pool.root.1
[2025-06-03 20:34:06]  *** Contents of shared directory: ***
[2025-06-03 20:34:06] total 384872
[2025-06-03 20:34:06] -rw-r--r--. 2 boincer umatlas 217085994 Jun  3 19:08 ATLAS.root_0
[2025-06-03 20:34:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 19:08 start_atlas.sh
[2025-06-03 20:34:06] -rw-r--r--. 2 boincer umatlas    508887 Jun  3 19:08 input.tar.gz
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas 175615063 Jun  3 20:33 HITS.pool.root.1
[2025-06-03 20:34:06] -rw-------. 1 boincer umatlas    870400 Jun  3 20:34 result.tar.gz
20:34:27 (2093444): run_atlas exited; CPU time 42046.580589
20:34:27 (2093444): called boinc_finish(0)

</stderr_txt>
]]>

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