Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:01:25 (7490): wrapper (7.7.26015): starting
10:01:25 (7490): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:01:25] Arguments: --nthreads 8
[2025-06-04 10:01:25] Threads: 8
[2025-06-04 10:01:25] Checking for CVMFS
[2025-06-04 10:01:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:01:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:01:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:01:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:01:27] 2.11.2.0 27084 32929 90040 146772 3 16 14636589 25165825 2749 130560 0 16688464 99.801 19460034 2059 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:01:27] CVMFS is ok
[2025-06-04 10:01:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:01:27] Checking for apptainer binary...
[2025-06-04 10:01:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:01:27] Running /usr/bin/apptainer --version
[2025-06-04 10:01:27] apptainer version 1.3.2-1.el7
[2025-06-04 10:01:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:01:39] cg-vwn405.simple-grid.lan
[2025-06-04 10:01:39] apptainer works
[2025-06-04 10:01:39] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:01:39] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:01:39] Starting ATLAS job with PandaID=6677977984
[2025-06-04 10:01:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:54:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:54:10] 2025-06-04 11:52:51,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:54:10] 2025-06-04 11:52:51,734 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:54:10] 2025-06-04 11:52:51,735 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,737 | INFO     | sum of deviations: 87447289380.99997
[2025-06-04 13:54:10] 2025-06-04 11:52:51,737 | INFO     | mean x: 1749031303.0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,737 | INFO     | mean y: 2414282.358139535
[2025-06-04 13:54:10] 2025-06-04 11:52:51,737 | INFO     | -- intersect: -49629328568.033394
[2025-06-04 13:54:10] 2025-06-04 11:52:51,737 | INFO     | intersect: -49629328568.033394
[2025-06-04 13:54:10] 2025-06-04 11:52:51,738 | INFO     | chi2: 6.636523418562543
[2025-06-04 13:54:10] 2025-06-04 11:52:51,738 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 13:54:10] 2025-06-04 11:52:51,740 | INFO     | sum of deviations: 99553617902.99998
[2025-06-04 13:54:10] 2025-06-04 11:52:51,740 | INFO     | mean x: 1749031150.5
[2025-06-04 13:54:10] 2025-06-04 11:52:51,740 | INFO     | mean y: 2422877.9714285713
[2025-06-04 13:54:10] 2025-06-04 11:52:51,740 | INFO     | -- intersect: -60633240283.560104
[2025-06-04 13:54:10] 2025-06-04 11:52:51,740 | INFO     | intersect: -60633240283.560104
[2025-06-04 13:54:10] 2025-06-04 11:52:51,740 | INFO     | chi2: 5.913652216826357
[2025-06-04 13:54:10] 2025-06-04 11:52:51,741 | INFO     | current chi2=5.913652216826357 (change=10.892317500369174 %)
[2025-06-04 13:54:10] 2025-06-04 11:52:51,741 | INFO     | right removable region: 209
[2025-06-04 13:54:10] 2025-06-04 11:52:51,741 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 13:54:10] 2025-06-04 11:52:51,743 | INFO     | sum of deviations: 16212137292.499998
[2025-06-04 13:54:10] 2025-06-04 11:52:51,743 | INFO     | mean x: 1749031455.5
[2025-06-04 13:54:10] 2025-06-04 11:52:51,743 | INFO     | mean y: 2465948.119047619
[2025-06-04 13:54:10] 2025-06-04 11:52:51,743 | INFO     | -- intersect: -9871950352.632442
[2025-06-04 13:54:10] 2025-06-04 11:52:51,744 | INFO     | intersect: -9871950352.632442
[2025-06-04 13:54:10] 2025-06-04 11:52:51,744 | INFO     | chi2: 2.1326716686345
[2025-06-04 13:54:10] 2025-06-04 11:52:51,744 | INFO     | current chi2=2.1326716686345 (change=67.86462528453742 %)
[2025-06-04 13:54:10] 2025-06-04 11:52:51,744 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,746 | INFO     | sum of deviations: -19527187691.0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,746 | INFO     | mean x: 1749031608.0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,746 | INFO     | mean y: 2493014.8731707316
[2025-06-04 13:54:10] 2025-06-04 11:52:51,746 | INFO     | -- intersect: 12787697715.480701
[2025-06-04 13:54:10] 2025-06-04 11:52:51,746 | INFO     | intersect: 12787697715.480701
[2025-06-04 13:54:10] 2025-06-04 11:52:51,747 | INFO     | chi2: 0.8821361760938644
[2025-06-04 13:54:10] 2025-06-04 11:52:51,747 | INFO     | current chi2=0.8821361760938644 (change=58.637037802510136 %)
[2025-06-04 13:54:10] 2025-06-04 11:52:51,747 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,749 | INFO     | sum of deviations: -26247420624.0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,749 | INFO     | mean x: 1749031760.5
[2025-06-04 13:54:10] 2025-06-04 11:52:51,749 | INFO     | mean y: 2498334.37
[2025-06-04 13:54:10] 2025-06-04 11:52:51,749 | INFO     | -- intersect: 18509104093.808018
[2025-06-04 13:54:10] 2025-06-04 11:52:51,749 | INFO     | intersect: 18509104093.808018
[2025-06-04 13:54:10] 2025-06-04 11:52:51,750 | INFO     | chi2: 0.8117248370926811
[2025-06-04 13:54:10] 2025-06-04 11:52:51,750 | INFO     | current chi2=0.8117248370926811 (change=7.981912646748904 %)
[2025-06-04 13:54:10] 2025-06-04 11:52:51,750 | INFO     | left removable region: 30
[2025-06-04 13:54:10] 2025-06-04 11:52:51,750 | INFO     | sum of square deviations: 1778377530.0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,741 | INFO     | monitor loop #1015: job 0:6677977984 is in state 'finished'
[2025-06-04 13:54:10] 2025-06-04 11:52:51,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:54:10] 2025-06-04 11:52:51,752 | INFO     | sum of deviations: -10777602244.000002
[2025-06-04 13:54:10] 2025-06-04 11:52:51,752 | INFO     | mean x: 1749032035.0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,752 | INFO     | mean y: 2508302.4525139667
[2025-06-04 13:54:10] 2025-06-04 11:52:51,753 | INFO     | -- intersect: 10602266378.142939
[2025-06-04 13:54:10] 2025-06-04 11:52:51,753 | INFO     | intersect: 10602266378.142939
[2025-06-04 13:54:10] 2025-06-04 11:52:51,753 | INFO     | chi2: 0.015573269544416613
[2025-06-04 13:54:10] 2025-06-04 11:52:51,753 | INFO     | -- intersect: 10602266378.142939
[2025-06-04 13:54:10] 2025-06-04 11:52:51,753 | INFO     | current memory leak: -6.06 B/s (using 179 data points, chi2=0.02)
[2025-06-04 13:54:10] 2025-06-04 11:52:51,754 | INFO     | ..............................
[2025-06-04 13:54:10] 2025-06-04 11:52:51,754 | INFO     | . Timing measurements:
[2025-06-04 13:54:10] 2025-06-04 11:52:51,754 | INFO     | . get job = 0 s
[2025-06-04 13:54:10] 2025-06-04 11:52:51,754 | INFO     | . initial setup = 6 s
[2025-06-04 13:54:10] 2025-06-04 11:52:51,754 | INFO     | . payload setup = 155 s
[2025-06-04 13:54:10] 2025-06-04 11:52:51,755 | INFO     | . stage-in = 0 s
[2025-06-04 13:54:10] 2025-06-04 11:52:51,755 | INFO     | . payload execution = 13233 s
[2025-06-04 13:54:10] 2025-06-04 11:52:51,755 | INFO     | . stage-out = 5 s
[2025-06-04 13:54:10] 2025-06-04 11:52:51,755 | INFO     | . log creation = 1 s
[2025-06-04 13:54:10] 2025-06-04 11:52:51,755 | INFO     | ..............................
[2025-06-04 13:54:10] 2025-06-04 11:52:51,888 | INFO     | 
[2025-06-04 13:54:10] 2025-06-04 11:52:51,889 | INFO     | job summary report
[2025-06-04 13:54:10] 2025-06-04 11:52:51,889 | INFO     | --------------------------------------------------
[2025-06-04 13:54:10] 2025-06-04 11:52:51,889 | INFO     | PanDA job id: 6677977984
[2025-06-04 13:54:10] 2025-06-04 11:52:51,889 | INFO     | task id: 45006595
[2025-06-04 13:54:10] 2025-06-04 11:52:51,889 | INFO     | errors: (none)
[2025-06-04 13:54:10] 2025-06-04 11:52:51,889 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:54:10] 2025-06-04 11:52:51,889 | INFO     | pilot state: finished 
[2025-06-04 13:54:10] 2025-06-04 11:52:51,889 | INFO     | transexitcode: 0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | exeerrorcode: 0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | exeerrordiag: 
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | exitcode: 0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | exitmsg: OK
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | cpuconsumptiontime: 48899 s
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | nevents: 400
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | neventsw: 0
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | pid: 19839
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | pgrp: 19839
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | corecount: 8
[2025-06-04 13:54:10] 2025-06-04 11:52:51,890 | INFO     | event service: False
[2025-06-04 13:54:10] 2025-06-04 11:52:51,891 | INFO     | sizes: {0: 2404957, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 76: 2405508, 87: 2405564, 94: 2405798, 98: 2406106, 1
[2025-06-04 13:54:10] 2025-06-04 11:52:51,891 | INFO     | --------------------------------------------------
[2025-06-04 13:54:10] 2025-06-04 11:52:51,891 | INFO     | 
[2025-06-04 13:54:10] 2025-06-04 11:52:51,891 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 13:54:10] 2025-06-04 11:52:52,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,222 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,223 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,223 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,223 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,223 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,224 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:54:10] 2025-06-04 11:52:52,224 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,224 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:54:10] 2025-06-04 11:52:52,224 | INFO     | job 6677977984 has completed (purged errors)
[2025-06-04 13:54:10] 2025-06-04 11:52:52,225 | INFO     | overall cleanup function is called
[2025-06-04 13:54:10] 2025-06-04 11:52:53,234 | INFO     | --- collectZombieJob: --- 10, [19839]
[2025-06-04 13:54:10] 2025-06-04 11:52:53,235 | INFO     | zombie collector waiting for pid 19839
[2025-06-04 13:54:10] 2025-06-04 11:52:53,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:54:10] 2025-06-04 11:52:53,235 | INFO     | collected zombie processes
[2025-06-04 13:54:10] 2025-06-04 11:52:53,235 | INFO     | will attempt to kill all subprocesses of pid=19839
[2025-06-04 13:54:10] 2025-06-04 11:52:53,350 | INFO     | process IDs to be killed: [19839] (in reverse order)
[2025-06-04 13:54:10] 2025-06-04 11:52:53,519 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:54:10] 2025-06-04 11:52:53,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:54:10] 2025-06-04 11:52:53,523 | INFO     | did not find any defunct processes belonging to 19839
[2025-06-04 13:54:10] 2025-06-04 11:52:53,527 | INFO     | did not find any defunct processes belonging to 19839
[2025-06-04 13:54:10] 2025-06-04 11:52:53,527 | INFO     | ready for new job
[2025-06-04 13:54:10] 2025-06-04 11:52:53,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:54:10] 2025-06-04 11:52:53,530 | INFO     | **************************************
[2025-06-04 13:54:10] 2025-06-04 11:52:53,530 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:54:10] 2025-06-04 11:52:53,530 | INFO     | **************************************
[2025-06-04 13:54:10] 2025-06-04 11:52:53,530 | INFO     | 
[2025-06-04 13:54:10] 2025-06-04 11:52:53,531 | INFO     | pilot is running in a VM
[2025-06-04 13:54:10] 2025-06-04 11:52:53,531 | INFO     | architecture information:
[2025-06-04 13:54:10] 2025-06-04 11:52:53,531 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:54:10] 2025-06-04 11:52:53,559 | INFO     | cat /etc/os-release:
[2025-06-04 13:54:10] NAME="CentOS Linux"
[2025-06-04 13:54:10] VERSION="7 (Core)"
[2025-06-04 13:54:10] ID="centos"
[2025-06-04 13:54:10] ID_LIKE="rhel fedora"
[2025-06-04 13:54:10] VERSION_ID="7"
[2025-06-04 13:54:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:54:10] ANSI_COLOR="0;31"
[2025-06-04 13:54:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:54:10] HOME_URL="https://www.centos.org/"
[2025-06-04 13:54:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:54:10] 
[2025-06-04 13:54:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:54:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:54:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:54:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:54:10] 
[2025-06-04 13:54:10] 2025-06-04 11:52:53,559 | INFO     | **************************************
[2025-06-04 13:54:10] 2025-06-04 11:52:54,063 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 13:54:10] 2025-06-04 11:52:54,121 | INFO     | sufficient remaining disk space (496996712448 B)
[2025-06-04 13:54:10] 2025-06-04 11:52:54,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:54:10] 2025-06-04 11:52:54,122 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:54:10] 2025-06-04 11:52:54,122 | INFO     | update_server=False
[2025-06-04 13:54:10] 2025-06-04 11:52:54,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:54:10] 2025-06-04 11:52:54,123 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:54:10] 2025-06-04 11:52:54,124 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:54:10] 2025-06-04 11:52:54,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:54:10] 2025-06-04 11:52:54,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:54:10] 2025-06-04 11:52:54,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:54:10] 2025-06-04 11:52:54,258 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 13:54:10] 2025-06-04 11:52:54,259 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 13:54:10] 2025-06-04 11:52:54,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:54:10] 2025-06-04 11:52:54,259 | INFO     | will abort loop
[2025-06-04 13:54:10] 2025-06-04 11:52:54,651 | INFO     | all data control threads have been joined
[2025-06-04 13:54:10] 2025-06-04 11:52:55,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:54:10] 2025-06-04 11:52:55,129 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:55,194 | INFO     | [job] validate thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:55,265 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:55,386 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:55,462 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:55,630 | INFO     | all payload control threads have been joined
[2025-06-04 13:54:10] 2025-06-04 11:52:55,657 | INFO     | [data] control thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:55,755 | INFO     | all job control threads have been joined
[2025-06-04 13:54:10] 2025-06-04 11:52:56,146 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:56,147 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:56,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:56,384 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:56,620 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:56,636 | INFO     | [payload] control thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:56,761 | INFO     | [job] control thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:56,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:54:10] 2025-06-04 11:52:57,010 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:57,906 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:58,165 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:54:10] 2025-06-04 11:52:58,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139927763937088)>', '<ExcThread(monitor, started 139927182358272)>']
[2025-06-04 13:54:10] 2025-06-04 11:52:59,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:54:10] 2025-06-04 11:52:59,154 | INFO     | [monitor] control thread has ended
[2025-06-04 13:54:10] 2025-06-04 11:53:03,773 | INFO     | all workflow threads have been joined
[2025-06-04 13:54:10] 2025-06-04 11:53:03,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:54:10] 2025-06-04 11:53:03,774 | INFO     | traces error code: 0
[2025-06-04 13:54:10] 2025-06-04 11:53:03,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:54:10] 2025-06-04 11:53:04,058 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:54:10] 2025-06-04 11:53:04,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:54:10] 2025-06-04 11:53:04,238 [wrapper] pilotpid: 13237
[2025-06-04 13:54:10] 2025-06-04 11:53:04,360 [wrapper] Pilot exit status: 0
[2025-06-04 13:54:10] 2025-06-04 11:53:04,854 [wrapper] pandaids: 6677977984
[2025-06-04 13:54:10] 2025-06-04 11:53:05,094 [wrapper] cleanup supervisor_pilot 30120 13238
[2025-06-04 13:54:10] 2025-06-04 11:53:05,150 [wrapper] Test setup, not cleaning
[2025-06-04 13:54:10] 2025-06-04 11:53:05,196 [wrapper] apfmon messages muted
[2025-06-04 13:54:10] 2025-06-04 11:53:05,276 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:54:10] 2025-06-04 11:53:05,317 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:54:10]  *** Error codes and diagnostics ***
[2025-06-04 13:54:10]     "exeErrorCode": 0,
[2025-06-04 13:54:10]     "exeErrorDiag": "",
[2025-06-04 13:54:10]     "pilotErrorCode": 0,
[2025-06-04 13:54:10]     "pilotErrorDiag": "",
[2025-06-04 13:54:10]  *** Listing of results directory ***
[2025-06-04 13:54:10] total 385384
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 13:54:10] -rwx------. 1 boinc boinc     37140 Jun  3 21:16 runpilot2-wrapper.sh
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:16 queuedata.json
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:54:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:01 run_atlas
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:01 job.xml
[2025-06-04 13:54:10] -rw-r--r--. 2 boinc boinc 213008614 Jun  4 10:01 EVNT.45006593._001752.pool.root.1
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc      6392 Jun  4 10:01 init_data.xml
[2025-06-04 13:54:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:01 start_atlas.sh
[2025-06-04 13:54:10] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:01 shared
[2025-06-04 13:54:10] -rw-r--r--. 2 boinc boinc    508873 Jun  4 10:01 input.tar.gz
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:01 boinc_lockfile
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:01 pandaJob.out
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc    986745 Jun  4 10:04 agis_schedconf.cvmfs.json
[2025-06-04 13:54:10] drwx------. 4 boinc boinc      4096 Jun  4 10:04 pilot3
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc 174687409 Jun  4 13:49 HITS.45006595._043714.pool.root.1
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc       531 Jun  4 13:50 boinc_task_state.xml
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc      1014 Jun  4 13:51 memory_monitor_summary.json
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc   1598969 Jun  4 13:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc    386453 Jun  4 13:51 log.45006595._043714.job.log.tgz.1
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc        95 Jun  4 13:52 pilot_heartbeat.json
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc      7689 Jun  4 13:52 heartbeat.json
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc      4725 Jun  4 13:53 pilotlog.txt
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc   1173734 Jun  4 13:53 log.45006595._043714.job.log.1
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc       357 Jun  4 13:53 output.list
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:53 runtime_log
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc   1576960 Jun  4 13:53 result.tar.gz
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc      8659 Jun  4 13:53 runtime_log.err
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc       657 Jun  4 13:53 8DIKDmpImg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhslKDm5sDp2m.diag
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc      8192 Jun  4 13:54 boinc_mmap_file
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc        28 Jun  4 13:54 wrapper_checkpoint.txt
[2025-06-04 13:54:10] -rw-r--r--. 1 boinc boinc     20587 Jun  4 13:54 stderr.txt
[2025-06-04 13:54:10] HITS file was successfully produced:
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc 174687409 Jun  4 13:49 shared/HITS.pool.root.1
[2025-06-04 13:54:10]  *** Contents of shared directory: ***
[2025-06-04 13:54:10] total 380672
[2025-06-04 13:54:10] -rw-r--r--. 2 boinc boinc 213008614 Jun  4 10:01 ATLAS.root_0
[2025-06-04 13:54:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:01 start_atlas.sh
[2025-06-04 13:54:10] -rw-r--r--. 2 boinc boinc    508873 Jun  4 10:01 input.tar.gz
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc 174687409 Jun  4 13:49 HITS.pool.root.1
[2025-06-04 13:54:10] -rw-------. 1 boinc boinc   1576960 Jun  4 13:53 result.tar.gz
13:54:11 (7490): run_atlas exited; CPU time 49086.063695
13:54:11 (7490): called boinc_finish(0)

</stderr_txt>
]]>

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