Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:06:09 (32067): wrapper (7.7.26015): starting
11:06:09 (32067): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:06:09] Arguments: --nthreads 8
[2025-06-04 11:06:09] Threads: 8
[2025-06-04 11:06:09] Checking for CVMFS
[2025-06-04 11:06:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:06:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:06:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:06:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:06:12] 2.11.2.0 4277 32994 96012 146773 3 52 18280313 25165824 3747 130560 0 16559763 99.772 18390040 2160 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 11:06:12] CVMFS is ok
[2025-06-04 11:06:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:06:12] Checking for apptainer binary...
[2025-06-04 11:06:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:06:12] Running /usr/bin/apptainer --version
[2025-06-04 11:06:12] apptainer version 1.3.2-1.el7
[2025-06-04 11:06:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:29:04] cg-vwn279.simple-grid.lan
[2025-06-04 11:29:04] apptainer works
[2025-06-04 11:29:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:29:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:29:04] Starting ATLAS job with PandaID=6677621148
[2025-06-04 11:29:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:30:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:30:54] 2025-06-04 13:30:37,087 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:30:54] 2025-06-04 13:30:37,087 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:30:54] 2025-06-04 13:30:37,087 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:30:54] 2025-06-04 13:30:37,093 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:30:54] 2025-06-04 13:30:37,093 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,095 | INFO     | sum of deviations: 55120052254.000046
[2025-06-04 15:30:54] 2025-06-04 13:30:37,095 | INFO     | mean x: 1749036911.0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,096 | INFO     | mean y: 2443538.497797357
[2025-06-04 15:30:54] 2025-06-04 13:30:37,096 | INFO     | -- intersect: -26577926829.194103
[2025-06-04 15:30:54] 2025-06-04 13:30:37,096 | INFO     | intersect: -26577926829.194103
[2025-06-04 15:30:54] 2025-06-04 13:30:37,096 | INFO     | chi2: 6.8262583950948565
[2025-06-04 15:30:54] 2025-06-04 13:30:37,097 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 15:30:54] 2025-06-04 13:30:37,098 | INFO     | sum of deviations: 68883002916.00002
[2025-06-04 15:30:54] 2025-06-04 13:30:37,098 | INFO     | mean x: 1749036758.5
[2025-06-04 15:30:54] 2025-06-04 13:30:37,099 | INFO     | mean y: 2452317.018018018
[2025-06-04 15:30:54] 2025-06-04 13:30:37,099 | INFO     | -- intersect: -35510147989.96874
[2025-06-04 15:30:54] 2025-06-04 13:30:37,099 | INFO     | intersect: -35510147989.96874
[2025-06-04 15:30:54] 2025-06-04 13:30:37,099 | INFO     | chi2: 6.11652219737608
[2025-06-04 15:30:54] 2025-06-04 13:30:37,099 | INFO     | current chi2=6.11652219737608 (change=10.397148139437146 %)
[2025-06-04 15:30:54] 2025-06-04 13:30:37,099 | INFO     | right removable region: 221
[2025-06-04 15:30:54] 2025-06-04 13:30:37,100 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 15:30:54] 2025-06-04 13:30:37,101 | INFO     | sum of deviations: -23355639770.500004
[2025-06-04 15:30:54] 2025-06-04 13:30:37,102 | INFO     | mean x: 1749037063.5
[2025-06-04 15:30:54] 2025-06-04 13:30:37,102 | INFO     | mean y: 2494543.427927928
[2025-06-04 15:30:54] 2025-06-04 13:30:37,102 | INFO     | -- intersect: 12043485928.933502
[2025-06-04 15:30:54] 2025-06-04 13:30:37,102 | INFO     | intersect: 12043485928.933502
[2025-06-04 15:30:54] 2025-06-04 13:30:37,102 | INFO     | chi2: 2.009151133423369
[2025-06-04 15:30:54] 2025-06-04 13:30:37,102 | INFO     | current chi2=2.009151133423369 (change=70.56731496031436 %)
[2025-06-04 15:30:54] 2025-06-04 13:30:37,103 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,104 | INFO     | sum of deviations: -55274741666.00001
[2025-06-04 15:30:54] 2025-06-04 13:30:37,105 | INFO     | mean x: 1749037216.0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,105 | INFO     | mean y: 2516122.880184332
[2025-06-04 15:30:54] 2025-06-04 13:30:37,105 | INFO     | -- intersect: 30514986404.59671
[2025-06-04 15:30:54] 2025-06-04 13:30:37,105 | INFO     | intersect: 30514986404.59671
[2025-06-04 15:30:54] 2025-06-04 13:30:37,105 | INFO     | chi2: 1.0138627072929063
[2025-06-04 15:30:54] 2025-06-04 13:30:37,105 | INFO     | current chi2=1.0138627072929063 (change=49.53775799009218 %)
[2025-06-04 15:30:54] 2025-06-04 13:30:37,106 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,107 | INFO     | sum of deviations: -54981361007.0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,107 | INFO     | mean x: 1749037368.5
[2025-06-04 15:30:54] 2025-06-04 13:30:37,107 | INFO     | mean y: 2515877.4245283017
[2025-06-04 15:30:54] 2025-06-04 13:30:37,107 | INFO     | -- intersect: 32551559388.10295
[2025-06-04 15:30:54] 2025-06-04 13:30:37,108 | INFO     | intersect: 32551559388.10295
[2025-06-04 15:30:54] 2025-06-04 13:30:37,108 | INFO     | chi2: 0.9949035029520557
[2025-06-04 15:30:54] 2025-06-04 13:30:37,108 | INFO     | current chi2=0.9949035029520557 (change=1.8699972101225826 %)
[2025-06-04 15:30:54] 2025-06-04 13:30:37,108 | INFO     | left removable region: 30
[2025-06-04 15:30:54] 2025-06-04 13:30:37,108 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,110 | INFO     | sum of deviations: -19317377154.000008
[2025-06-04 15:30:54] 2025-06-04 13:30:37,110 | INFO     | mean x: 1749037643.0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,110 | INFO     | mean y: 2510218.8586387434
[2025-06-04 15:30:54] 2025-06-04 13:30:37,110 | INFO     | -- intersect: 15640491708.695011
[2025-06-04 15:30:54] 2025-06-04 13:30:37,111 | INFO     | intersect: 15640491708.695011
[2025-06-04 15:30:54] 2025-06-04 13:30:37,111 | INFO     | chi2: 0.14882770921157187
[2025-06-04 15:30:54] 2025-06-04 13:30:37,111 | INFO     | -- intersect: 15640491708.695011
[2025-06-04 15:30:54] 2025-06-04 13:30:37,111 | INFO     | current memory leak: -8.94 B/s (using 191 data points, chi2=0.15)
[2025-06-04 15:30:54] 2025-06-04 13:30:37,112 | INFO     | ..............................
[2025-06-04 15:30:54] 2025-06-04 13:30:37,112 | INFO     | . Timing measurements:
[2025-06-04 15:30:54] 2025-06-04 13:30:37,112 | INFO     | . get job = 0 s
[2025-06-04 15:30:54] 2025-06-04 13:30:37,113 | INFO     | . initial setup = 6 s
[2025-06-04 15:30:54] 2025-06-04 13:30:37,113 | INFO     | . payload setup = 135 s
[2025-06-04 15:30:54] 2025-06-04 13:30:37,113 | INFO     | . stage-in = 0 s
[2025-06-04 15:30:54] 2025-06-04 13:30:37,113 | INFO     | . payload execution = 13956 s
[2025-06-04 15:30:54] 2025-06-04 13:30:37,113 | INFO     | . stage-out = 1 s
[2025-06-04 15:30:54] 2025-06-04 13:30:37,113 | INFO     | . log creation = 0 s
[2025-06-04 15:30:54] 2025-06-04 13:30:37,113 | INFO     | ..............................
[2025-06-04 15:30:54] 2025-06-04 13:30:37,236 | INFO     | 
[2025-06-04 15:30:54] 2025-06-04 13:30:37,237 | INFO     | job summary report
[2025-06-04 15:30:54] 2025-06-04 13:30:37,237 | INFO     | --------------------------------------------------
[2025-06-04 15:30:54] 2025-06-04 13:30:37,237 | INFO     | PanDA job id: 6677621148
[2025-06-04 15:30:54] 2025-06-04 13:30:37,237 | INFO     | task id: 45006595
[2025-06-04 15:30:54] 2025-06-04 13:30:37,237 | INFO     | errors: (none)
[2025-06-04 15:30:54] 2025-06-04 13:30:37,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:30:54] 2025-06-04 13:30:37,237 | INFO     | pilot state: finished 
[2025-06-04 15:30:54] 2025-06-04 13:30:37,237 | INFO     | transexitcode: 0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | exeerrorcode: 0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | exeerrordiag: 
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | exitcode: 0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | exitmsg: OK
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | cpuconsumptiontime: 49877 s
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | nevents: 400
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | neventsw: 0
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | pid: 28056
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | pgrp: 28056
[2025-06-04 15:30:54] 2025-06-04 13:30:37,238 | INFO     | corecount: 8
[2025-06-04 15:30:54] 2025-06-04 13:30:37,239 | INFO     | event service: False
[2025-06-04 15:30:54] 2025-06-04 13:30:37,239 | INFO     | sizes: {0: 2404356, 1: 2405042, 2: 2405241, 13: 2405241, 24: 2405297, 35: 2405325, 45: 2405481, 56: 2405509, 67: 2405537, 78: 2405565, 88: 2406135, 99: 2406135, 14
[2025-06-04 15:30:54] 2025-06-04 13:30:37,239 | INFO     | --------------------------------------------------
[2025-06-04 15:30:54] 2025-06-04 13:30:37,239 | INFO     | 
[2025-06-04 15:30:54] 2025-06-04 13:30:37,239 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-04 15:30:54] 2025-06-04 13:30:37,285 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,285 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,286 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,286 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,287 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:30:54] 2025-06-04 13:30:37,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,288 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:30:54] 2025-06-04 13:30:37,288 | INFO     | job 6677621148 has completed (purged errors)
[2025-06-04 15:30:54] 2025-06-04 13:30:37,288 | INFO     | overall cleanup function is called
[2025-06-04 15:30:54] 2025-06-04 13:30:38,298 | INFO     | --- collectZombieJob: --- 10, [28056]
[2025-06-04 15:30:54] 2025-06-04 13:30:38,298 | INFO     | zombie collector waiting for pid 28056
[2025-06-04 15:30:54] 2025-06-04 13:30:38,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:30:54] 2025-06-04 13:30:38,298 | INFO     | collected zombie processes
[2025-06-04 15:30:54] 2025-06-04 13:30:38,298 | INFO     | will attempt to kill all subprocesses of pid=28056
[2025-06-04 15:30:54] 2025-06-04 13:30:38,394 | INFO     | process IDs to be killed: [28056] (in reverse order)
[2025-06-04 15:30:54] 2025-06-04 13:30:38,457 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:30:54] 2025-06-04 13:30:38,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:30:54] 2025-06-04 13:30:38,461 | INFO     | did not find any defunct processes belonging to 28056
[2025-06-04 15:30:54] 2025-06-04 13:30:38,465 | INFO     | did not find any defunct processes belonging to 28056
[2025-06-04 15:30:54] 2025-06-04 13:30:38,465 | INFO     | ready for new job
[2025-06-04 15:30:54] 2025-06-04 13:30:38,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:30:54] 2025-06-04 13:30:38,468 | INFO     | **************************************
[2025-06-04 15:30:54] 2025-06-04 13:30:38,468 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:30:54] 2025-06-04 13:30:38,468 | INFO     | **************************************
[2025-06-04 15:30:54] 2025-06-04 13:30:38,468 | INFO     | 
[2025-06-04 15:30:54] 2025-06-04 13:30:38,469 | INFO     | pilot is running in a VM
[2025-06-04 15:30:54] 2025-06-04 13:30:38,469 | INFO     | architecture information:
[2025-06-04 15:30:54] 2025-06-04 13:30:38,469 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:30:54] 2025-06-04 13:30:38,503 | INFO     | cat /etc/os-release:
[2025-06-04 15:30:54] NAME="CentOS Linux"
[2025-06-04 15:30:54] VERSION="7 (Core)"
[2025-06-04 15:30:54] ID="centos"
[2025-06-04 15:30:54] ID_LIKE="rhel fedora"
[2025-06-04 15:30:54] VERSION_ID="7"
[2025-06-04 15:30:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:30:54] ANSI_COLOR="0;31"
[2025-06-04 15:30:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:30:54] HOME_URL="https://www.centos.org/"
[2025-06-04 15:30:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:30:54] 
[2025-06-04 15:30:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:30:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:30:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:30:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:30:54] 
[2025-06-04 15:30:54] 2025-06-04 13:30:38,503 | INFO     | **************************************
[2025-06-04 15:30:54] 2025-06-04 13:30:39,007 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-04 15:30:54] 2025-06-04 13:30:39,056 | INFO     | sufficient remaining disk space (496755539968 B)
[2025-06-04 15:30:54] 2025-06-04 13:30:39,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:30:54] 2025-06-04 13:30:39,057 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:30:54] 2025-06-04 13:30:39,057 | INFO     | update_server=False
[2025-06-04 15:30:54] 2025-06-04 13:30:39,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:30:54] 2025-06-04 13:30:39,057 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 15:30:54] 2025-06-04 13:30:39,058 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:30:54] 2025-06-04 13:30:39,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:30:54] 2025-06-04 13:30:39,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:30:54] 2025-06-04 13:30:39,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:30:54] 2025-06-04 13:30:39,427 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 15:30:54] 2025-06-04 13:30:39,427 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 15:30:54] 2025-06-04 13:30:39,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:30:54] 2025-06-04 13:30:39,427 | INFO     | will abort loop
[2025-06-04 15:30:54] 2025-06-04 13:30:39,652 | INFO     | all job control threads have been joined
[2025-06-04 15:30:54] 2025-06-04 13:30:39,754 | INFO     | all payload control threads have been joined
[2025-06-04 15:30:54] 2025-06-04 13:30:39,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:30:54] 2025-06-04 13:30:40,062 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:40,071 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:40,121 | INFO     | all data control threads have been joined
[2025-06-04 15:30:54] 2025-06-04 13:30:40,361 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:40,430 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:40,431 | INFO     | [job] validate thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:40,433 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:40,465 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:40,659 | INFO     | [job] control thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:40,760 | INFO     | [payload] control thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:40,852 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:41,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:41,125 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:41,128 | INFO     | [data] control thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:41,442 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:41,834 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:42,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:30:54] 2025-06-04 13:30:46,501 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:30:54] 2025-06-04 13:30:48,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819561203520)>', '<ExcThread(monitor, started 139818751219456)>']
[2025-06-04 15:30:54] 2025-06-04 13:30:49,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:30:54] 2025-06-04 13:30:49,117 | INFO     | [monitor] control thread has ended
[2025-06-04 15:30:54] 2025-06-04 13:30:53,651 | INFO     | all workflow threads have been joined
[2025-06-04 15:30:54] 2025-06-04 13:30:53,651 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:30:54] 2025-06-04 13:30:53,651 | INFO     | traces error code: 0
[2025-06-04 15:30:54] 2025-06-04 13:30:53,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:30:54] 2025-06-04 13:30:53,885 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:30:54] 2025-06-04 13:30:53,896 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:30:54] 2025-06-04 13:30:53,907 [wrapper] pilotpid: 17442
[2025-06-04 15:30:54] 2025-06-04 13:30:53,910 [wrapper] Pilot exit status: 0
[2025-06-04 15:30:54] 2025-06-04 13:30:53,947 [wrapper] pandaids: 6677621148
[2025-06-04 15:30:54] 2025-06-04 13:30:54,001 [wrapper] cleanup supervisor_pilot  4560 17443
[2025-06-04 15:30:54] 2025-06-04 13:30:54,016 [wrapper] Test setup, not cleaning
[2025-06-04 15:30:54] 2025-06-04 13:30:54,029 [wrapper] apfmon messages muted
[2025-06-04 15:30:54] 2025-06-04 13:30:54,040 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:30:54] 2025-06-04 13:30:54,048 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:30:54]  *** Error codes and diagnostics ***
[2025-06-04 15:30:54]     "exeErrorCode": 0,
[2025-06-04 15:30:54]     "exeErrorDiag": "",
[2025-06-04 15:30:54]     "pilotErrorCode": 0,
[2025-06-04 15:30:54]     "pilotErrorDiag": "",
[2025-06-04 15:30:54]  *** Listing of results directory ***
[2025-06-04 15:30:54] total 388584
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:59 pilot3.tar.gz
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:09 queuedata.json
[2025-06-04 15:30:54] -rwx------. 1 boinc boinc     37140 Jun  3 15:10 runpilot2-wrapper.sh
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc       100 Jun  4 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:30:54] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 11:06 run_atlas
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc       105 Jun  4 11:06 job.xml
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc      6392 Jun  4 11:06 init_data.xml
[2025-06-04 15:30:54] -rw-r--r--. 2 boinc boinc 213707433 Jun  4 11:06 EVNT.45006593._001342.pool.root.1
[2025-06-04 15:30:54] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:06 start_atlas.sh
[2025-06-04 15:30:54] drwxrwx--x. 2 boinc boinc        68 Jun  4 11:06 shared
[2025-06-04 15:30:54] -rw-r--r--. 2 boinc boinc    508881 Jun  4 11:06 input.tar.gz
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc         0 Jun  4 11:06 boinc_lockfile
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc      2525 Jun  4 11:29 pandaJob.out
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc    986766 Jun  4 11:32 agis_schedconf.cvmfs.json
[2025-06-04 15:30:54] drwx------. 4 boinc boinc      4096 Jun  4 11:32 pilot3
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc 177160332 Jun  4 15:29 HITS.45006595._033357.pool.root.1
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc       531 Jun  4 15:30 boinc_task_state.xml
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc      1017 Jun  4 15:30 memory_monitor_summary.json
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc   1598969 Jun  4 15:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc    390748 Jun  4 15:30 log.45006595._033357.job.log.tgz.1
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc        95 Jun  4 15:30 pilot_heartbeat.json
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc      7688 Jun  4 15:30 heartbeat.json
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc        28 Jun  4 15:30 wrapper_checkpoint.txt
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc      8192 Jun  4 15:30 boinc_mmap_file
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc      4726 Jun  4 15:30 pilotlog.txt
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc   1220402 Jun  4 15:30 log.45006595._033357.job.log.1
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc       357 Jun  4 15:30 output.list
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc       620 Jun  4 15:30 runtime_log
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc   1628160 Jun  4 15:30 result.tar.gz
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc      8673 Jun  4 15:30 runtime_log.err
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc       657 Jun  4 15:30 NmGKDmeagg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5GkKDmKKvJam.diag
[2025-06-04 15:30:54] -rw-r--r--. 1 boinc boinc     20541 Jun  4 15:30 stderr.txt
[2025-06-04 15:30:54] HITS file was successfully produced:
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc 177160332 Jun  4 15:29 shared/HITS.pool.root.1
[2025-06-04 15:30:54]  *** Contents of shared directory: ***
[2025-06-04 15:30:54] total 383820
[2025-06-04 15:30:54] -rw-r--r--. 2 boinc boinc 213707433 Jun  4 11:06 ATLAS.root_0
[2025-06-04 15:30:54] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:06 start_atlas.sh
[2025-06-04 15:30:54] -rw-r--r--. 2 boinc boinc    508881 Jun  4 11:06 input.tar.gz
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc 177160332 Jun  4 15:29 HITS.pool.root.1
[2025-06-04 15:30:54] -rw-------. 1 boinc boinc   1628160 Jun  4 15:30 result.tar.gz
15:30:55 (32067): run_atlas exited; CPU time 50073.744433
15:30:55 (32067): called boinc_finish(0)

</stderr_txt>
]]>

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