Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:10:55 (16044): wrapper (7.7.26015): starting
15:10:55 (16044): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:10:55] Arguments: --nthreads 8
[2025-06-04 15:10:55] Threads: 8
[2025-06-04 15:10:55] Checking for CVMFS
[2025-06-04 15:10:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:10:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:10:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:10:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:10:59] 2.11.2.0 8404 33417 97416 146780 3 158 18845765 25165825 3632 130560 0 17377611 99.833 19123752 4313 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 15:10:59] CVMFS is ok
[2025-06-04 15:10:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:10:59] Checking for apptainer binary...
[2025-06-04 15:10:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:10:59] Running /usr/bin/apptainer --version
[2025-06-04 15:10:59] apptainer version 1.3.2-1.el7
[2025-06-04 15:10:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:11:11] cg-vwn309.simple-grid.lan
[2025-06-04 15:11:11] apptainer works
[2025-06-04 15:11:11] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:11:11] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:11:11] Starting ATLAS job with PandaID=6677977936
[2025-06-04 15:11:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:21:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:21:09] 2025-06-04 16:57:44,652 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6677977936/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:21:09] 2025-06-04 16:57:44,653 | INFO     | extracted standard info from prmon json
[2025-06-04 19:21:09] 2025-06-04 16:57:44,654 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:21:09] 2025-06-04 16:57:44,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:21:09] 2025-06-04 16:57:44,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:21:09] 2025-06-04 16:57:44,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:21:09] 2025-06-04 16:57:44,659 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:21:09] 2025-06-04 16:57:44,659 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,661 | INFO     | sum of deviations: 21897450935.500004
[2025-06-04 19:21:09] 2025-06-04 16:57:44,661 | INFO     | mean x: 1749049453.5
[2025-06-04 19:21:09] 2025-06-04 16:57:44,661 | INFO     | mean y: 2457031.1136363638
[2025-06-04 19:21:09] 2025-06-04 16:57:44,662 | INFO     | -- intersect: -11597547468.926746
[2025-06-04 19:21:09] 2025-06-04 16:57:44,662 | INFO     | intersect: -11597547468.926746
[2025-06-04 19:21:09] 2025-06-04 16:57:44,662 | INFO     | chi2: 2.5308647063210965
[2025-06-04 19:21:09] 2025-06-04 16:57:44,663 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,664 | INFO     | sum of deviations: 36434184920.0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,664 | INFO     | mean x: 1749049301.0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,664 | INFO     | mean y: 2466908.846511628
[2025-06-04 19:21:09] 2025-06-04 16:57:44,665 | INFO     | -- intersect: -20676398239.778378
[2025-06-04 19:21:09] 2025-06-04 16:57:44,665 | INFO     | intersect: -20676398239.778378
[2025-06-04 19:21:09] 2025-06-04 16:57:44,665 | INFO     | chi2: 1.6608892273826414
[2025-06-04 19:21:09] 2025-06-04 16:57:44,665 | INFO     | current chi2=1.6608892273826414 (change=34.37463396465253 %)
[2025-06-04 19:21:09] 2025-06-04 16:57:44,666 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 19:21:09] 2025-06-04 16:57:44,667 | INFO     | sum of deviations: 35277017878.5
[2025-06-04 19:21:09] 2025-06-04 16:57:44,667 | INFO     | mean x: 1749049148.5
[2025-06-04 19:21:09] 2025-06-04 16:57:44,667 | INFO     | mean y: 2466068.5476190476
[2025-06-04 19:21:09] 2025-06-04 16:57:44,667 | INFO     | -- intersect: -21484120052.90594
[2025-06-04 19:21:09] 2025-06-04 16:57:44,668 | INFO     | intersect: -21484120052.90594
[2025-06-04 19:21:09] 2025-06-04 16:57:44,668 | INFO     | chi2: 1.6619742863013338
[2025-06-04 19:21:09] 2025-06-04 16:57:44,668 | INFO     | current chi2=1.6619742863013338 (change=-0.06532999918376811 %)
[2025-06-04 19:21:09] 2025-06-04 16:57:44,668 | INFO     | right removable region: 209
[2025-06-04 19:21:09] 2025-06-04 16:57:44,669 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,670 | INFO     | sum of deviations: -15116183628.999996
[2025-06-04 19:21:09] 2025-06-04 16:57:44,671 | INFO     | mean x: 1749049606.0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,671 | INFO     | mean y: 2482455.223255814
[2025-06-04 19:21:09] 2025-06-04 16:57:44,671 | INFO     | -- intersect: 8581940950.619879
[2025-06-04 19:21:09] 2025-06-04 16:57:44,671 | INFO     | intersect: 8581940950.619879
[2025-06-04 19:21:09] 2025-06-04 16:57:44,671 | INFO     | chi2: 0.9627927308663752
[2025-06-04 19:21:09] 2025-06-04 16:57:44,671 | INFO     | current chi2=0.9627927308663752 (change=61.95795340376351 %)
[2025-06-04 19:21:09] 2025-06-04 16:57:44,672 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 19:21:09] 2025-06-04 16:57:44,673 | INFO     | sum of deviations: -11639346011.0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,674 | INFO     | mean x: 1749049758.5
[2025-06-04 19:21:09] 2025-06-04 16:57:44,674 | INFO     | mean y: 2479890.4476190475
[2025-06-04 19:21:09] 2025-06-04 16:57:44,674 | INFO     | -- intersect: 7091795051.54355
[2025-06-04 19:21:09] 2025-06-04 16:57:44,674 | INFO     | intersect: 7091795051.54355
[2025-06-04 19:21:09] 2025-06-04 16:57:44,681 | INFO     | chi2: 0.9392497256576416
[2025-06-04 19:21:09] 2025-06-04 16:57:44,682 | INFO     | current chi2=0.9392497256576416 (change=2.445282816743767 %)
[2025-06-04 19:21:09] 2025-06-04 16:57:44,682 | INFO     | left removable region: 20
[2025-06-04 19:21:09] 2025-06-04 16:57:44,682 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,684 | INFO     | sum of deviations: 7316005658.999998
[2025-06-04 19:21:09] 2025-06-04 16:57:44,684 | INFO     | mean x: 1749049728.0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,684 | INFO     | mean y: 2486485.433862434
[2025-06-04 19:21:09] 2025-06-04 16:57:44,684 | INFO     | -- intersect: -6110092888.671695
[2025-06-04 19:21:09] 2025-06-04 16:57:44,684 | INFO     | intersect: -6110092888.671695
[2025-06-04 19:21:09] 2025-06-04 16:57:44,685 | INFO     | chi2: 0.0005708860886401747
[2025-06-04 19:21:09] 2025-06-04 16:57:44,685 | INFO     | -- intersect: -6110092888.671695
[2025-06-04 19:21:09] 2025-06-04 16:57:44,685 | INFO     | current memory leak: 3.49 B/s (using 189 data points, chi2=0.00)
[2025-06-04 19:21:09] 2025-06-04 16:57:44,686 | INFO     | ..............................
[2025-06-04 19:21:09] 2025-06-04 16:57:44,686 | INFO     | . Timing measurements:
[2025-06-04 19:21:09] 2025-06-04 16:57:44,686 | INFO     | . get job = 0 s
[2025-06-04 19:21:09] 2025-06-04 16:57:44,686 | INFO     | . initial setup = 2 s
[2025-06-04 19:21:09] 2025-06-04 16:57:44,686 | INFO     | . payload setup = 17 s
[2025-06-04 19:21:09] 2025-06-04 16:57:44,686 | INFO     | . stage-in = 0 s
[2025-06-04 19:21:09] 2025-06-04 16:57:44,686 | INFO     | . payload execution = 13431 s
[2025-06-04 19:21:09] 2025-06-04 16:57:44,686 | INFO     | . stage-out = 2 s
[2025-06-04 19:21:09] 2025-06-04 16:57:44,687 | INFO     | . log creation = 0 s
[2025-06-04 19:21:09] 2025-06-04 16:57:44,687 | INFO     | ..............................
[2025-06-04 19:21:09] 2025-06-04 16:57:44,846 | INFO     | 
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | job summary report
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | --------------------------------------------------
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | PanDA job id: 6677977936
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | task id: 45006595
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | errors: (none)
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | pilot state: finished 
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | transexitcode: 0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | exeerrorcode: 0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,847 | INFO     | exeerrordiag: 
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | exitcode: 0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | exitmsg: OK
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | cpuconsumptiontime: 50430 s
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | nevents: 400
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | neventsw: 0
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | pid: 28621
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | pgrp: 28621
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | corecount: 8
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | event service: False
[2025-06-04 19:21:09] 2025-06-04 16:57:44,848 | INFO     | sizes: {0: 2397172, 1: 2397371, 12: 2397605, 23: 2397605, 13453: 2427210, 13454: 2427209, 13458: 2436336, 13460: 2436392, 13536: 2436562}
[2025-06-04 19:21:09] 2025-06-04 16:57:44,849 | INFO     | --------------------------------------------------
[2025-06-04 19:21:09] 2025-06-04 16:57:44,849 | INFO     | 
[2025-06-04 19:21:09] 2025-06-04 16:57:44,849 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-04 19:21:09] 2025-06-04 16:57:45,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,225 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,225 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,225 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,226 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:21:09] 2025-06-04 16:57:45,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,227 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:21:09] 2025-06-04 16:57:45,227 | INFO     | job 6677977936 has completed (purged errors)
[2025-06-04 19:21:09] 2025-06-04 16:57:45,227 | INFO     | overall cleanup function is called
[2025-06-04 19:21:09] 2025-06-04 16:57:46,237 | INFO     | --- collectZombieJob: --- 10, [28621]
[2025-06-04 19:21:09] 2025-06-04 16:57:46,238 | INFO     | zombie collector waiting for pid 28621
[2025-06-04 19:21:09] 2025-06-04 16:57:46,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:21:09] 2025-06-04 16:57:46,238 | INFO     | collected zombie processes
[2025-06-04 19:21:09] 2025-06-04 16:57:46,238 | INFO     | will attempt to kill all subprocesses of pid=28621
[2025-06-04 19:21:09] 2025-06-04 16:57:46,383 | INFO     | process IDs to be killed: [28621] (in reverse order)
[2025-06-04 19:21:09] 2025-06-04 16:57:46,688 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:21:09] 2025-06-04 16:57:46,688 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:21:09] 2025-06-04 16:57:46,694 | INFO     | did not find any defunct processes belonging to 28621
[2025-06-04 19:21:09] 2025-06-04 16:57:46,698 | INFO     | did not find any defunct processes belonging to 28621
[2025-06-04 19:21:09] 2025-06-04 16:57:46,698 | INFO     | ready for new job
[2025-06-04 19:21:09] 2025-06-04 16:57:46,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:21:09] 2025-06-04 16:57:46,700 | INFO     | **************************************
[2025-06-04 19:21:09] 2025-06-04 16:57:46,701 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:21:09] 2025-06-04 16:57:46,701 | INFO     | **************************************
[2025-06-04 19:21:09] 2025-06-04 16:57:46,701 | INFO     | 
[2025-06-04 19:21:09] 2025-06-04 16:57:46,702 | INFO     | pilot is running in a VM
[2025-06-04 19:21:09] 2025-06-04 16:57:46,702 | INFO     | architecture information:
[2025-06-04 19:21:09] 2025-06-04 16:57:46,704 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:21:09] 2025-06-04 16:57:46,989 | INFO     | cat /etc/os-release:
[2025-06-04 19:21:09] NAME="CentOS Linux"
[2025-06-04 19:21:09] VERSION="7 (Core)"
[2025-06-04 19:21:09] ID="centos"
[2025-06-04 19:21:09] ID_LIKE="rhel fedora"
[2025-06-04 19:21:09] VERSION_ID="7"
[2025-06-04 19:21:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:21:09] ANSI_COLOR="0;31"
[2025-06-04 19:21:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:21:09] HOME_URL="https://www.centos.org/"
[2025-06-04 19:21:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:21:09] 
[2025-06-04 19:21:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:21:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:21:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:21:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:21:09] 
[2025-06-04 19:21:09] 2025-06-04 16:57:46,989 | INFO     | **************************************
[2025-06-04 19:21:09] 2025-06-04 16:57:47,494 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-04 19:21:09] 2025-06-04 16:57:47,798 | INFO     | sufficient remaining disk space (496672702464 B)
[2025-06-04 19:21:09] 2025-06-04 16:57:47,799 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:21:09] 2025-06-04 16:57:47,799 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:21:09] 2025-06-04 16:57:47,799 | INFO     | update_server=False
[2025-06-04 19:21:09] 2025-06-04 16:57:47,799 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:21:09] 2025-06-04 16:57:47,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:21:09] 2025-06-04 16:57:47,801 | INFO     | aborting loop
[2025-06-04 19:21:09] 2025-06-04 16:57:47,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:21:09] 2025-06-04 16:57:48,014 | INFO     | all data control threads have been joined
[2025-06-04 19:21:09] 2025-06-04 16:57:48,527 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:21:09] 2025-06-04 16:57:48,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:21:09] 2025-06-04 16:57:48,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:21:09] 2025-06-04 16:57:48,607 | INFO     | all payload control threads have been joined
[2025-06-04 19:21:09] 2025-06-04 16:57:48,805 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:48,806 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:48,812 | INFO     | all job control threads have been joined
[2025-06-04 19:21:09] 2025-06-04 16:57:48,886 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:49,020 | INFO     | [data] control thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:49,369 | INFO     | [job] validate thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:49,612 | INFO     | [payload] control thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:49,719 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:49,724 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:49,810 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:49,818 | INFO     | [job] control thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:49,835 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:49,860 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:21:09] 2025-06-04 16:57:49,955 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:50,144 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:50,264 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:50,866 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:51,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:21:09] 2025-06-04 16:57:55,207 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:21:09] 2025-06-04 16:57:57,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689892415296)>', '<ExcThread(monitor, started 139689306613504)>']
[2025-06-04 19:21:09] 2025-06-04 16:57:57,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:21:09] 2025-06-04 16:57:57,582 | INFO     | [monitor] control thread has ended
[2025-06-04 19:21:09] 2025-06-04 16:58:02,291 | INFO     | all workflow threads have been joined
[2025-06-04 19:21:09] 2025-06-04 16:58:02,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:21:09] 2025-06-04 16:58:02,292 | INFO     | traces error code: 0
[2025-06-04 19:21:09] 2025-06-04 16:58:02,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:21:09] 2025-06-04 16:58:02,590 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:21:09] 2025-06-04 16:58:02,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:21:09] 2025-06-04 16:58:02,701 [wrapper] pilotpid: 20056
[2025-06-04 19:21:09] 2025-06-04 16:58:02,756 [wrapper] Pilot exit status: 0
[2025-06-04 19:21:09] 2025-06-04 16:58:02,976 [wrapper] pandaids: 6677977936
[2025-06-04 19:21:09] 2025-06-04 16:58:03,658 [wrapper] cleanup supervisor_pilot 13716 20057
[2025-06-04 19:21:09] 2025-06-04 16:58:03,687 [wrapper] Test setup, not cleaning
[2025-06-04 19:21:09] 2025-06-04 16:58:03,722 [wrapper] apfmon messages muted
[2025-06-04 19:21:09] 2025-06-04 16:58:03,760 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:21:09] 2025-06-04 16:58:03,794 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:21:09]  *** Error codes and diagnostics ***
[2025-06-04 19:21:09]     "exeErrorCode": 0,
[2025-06-04 19:21:09]     "exeErrorDiag": "",
[2025-06-04 19:21:09]     "pilotErrorCode": 0,
[2025-06-04 19:21:09]     "pilotErrorDiag": "",
[2025-06-04 19:21:09]  *** Listing of results directory ***
[2025-06-04 19:21:09] total 388620
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:15 queuedata.json
[2025-06-04 19:21:09] -rwx------. 1 boinc boinc     37140 Jun  3 21:15 runpilot2-wrapper.sh
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:21:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:10 run_atlas
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:10 job.xml
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc      6392 Jun  4 15:10 init_data.xml
[2025-06-04 19:21:09] -rw-r--r--. 2 boinc boinc 215588292 Jun  4 15:10 EVNT.45006593._001750.pool.root.1
[2025-06-04 19:21:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:10 start_atlas.sh
[2025-06-04 19:21:09] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:10 shared
[2025-06-04 19:21:09] -rw-r--r--. 2 boinc boinc    508883 Jun  4 15:10 input.tar.gz
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:10 boinc_lockfile
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc      2525 Jun  4 15:11 pandaJob.out
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc    986811 Jun  4 15:11 agis_schedconf.cvmfs.json
[2025-06-04 19:21:09] drwx------. 4 boinc boinc      4096 Jun  4 15:11 pilot3
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc 175405388 Jun  4 18:55 HITS.45006595._043666.pool.root.1
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:55 boinc_task_state.xml
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc      1030 Jun  4 18:56 memory_monitor_summary.json
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc   1598969 Jun  4 18:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc    389789 Jun  4 18:56 log.45006595._043666.job.log.tgz.1
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc        95 Jun  4 18:57 pilot_heartbeat.json
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc      7690 Jun  4 18:57 heartbeat.json
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc      4417 Jun  4 18:58 pilotlog.txt
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc   1176609 Jun  4 18:58 log.45006595._043666.job.log.1
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc       357 Jun  4 18:58 output.list
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:58 runtime_log
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc   1587200 Jun  4 18:58 result.tar.gz
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc      8673 Jun  4 18:58 runtime_log.err
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc       657 Jun  4 18:58 3ZcMDmqHmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSslKDmCOVaqm.diag
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc      8192 Jun  4 19:21 boinc_mmap_file
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc        28 Jun  4 19:21 wrapper_checkpoint.txt
[2025-06-04 19:21:09] -rw-r--r--. 1 boinc boinc     20508 Jun  4 19:21 stderr.txt
[2025-06-04 19:21:09] HITS file was successfully produced:
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc 175405388 Jun  4 18:55 shared/HITS.pool.root.1
[2025-06-04 19:21:09]  *** Contents of shared directory: ***
[2025-06-04 19:21:09] total 383900
[2025-06-04 19:21:09] -rw-r--r--. 2 boinc boinc 215588292 Jun  4 15:10 ATLAS.root_0
[2025-06-04 19:21:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:10 start_atlas.sh
[2025-06-04 19:21:09] -rw-r--r--. 2 boinc boinc    508883 Jun  4 15:10 input.tar.gz
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc 175405388 Jun  4 18:55 HITS.pool.root.1
[2025-06-04 19:21:09] -rw-------. 1 boinc boinc   1587200 Jun  4 18:58 result.tar.gz
19:21:11 (16044): run_atlas exited; CPU time 50614.681119
19:21:11 (16044): called boinc_finish(0)

</stderr_txt>
]]>

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