Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:28:29 (2845743): wrapper (7.7.26015): starting
15:28:29 (2845743): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 15:28:29] Arguments: --nthreads 4
[2025-06-05 15:28:29] Threads: 4
[2025-06-05 15:28:29] Checking for CVMFS
[2025-06-05 15:28:29] No cvmfs_config command found, will try listing directly
[2025-06-05 15:28:29] CVMFS is ok
[2025-06-05 15:28:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:28:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:28:29] Further information can be found at the LHC@home message board.
[2025-06-05 15:28:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:28:29] Checking for apptainer binary...
[2025-06-05 15:28:29] which: no apptainer in ((null))
[2025-06-05 15:28:29] apptainer is not installed, using version from CVMFS
[2025-06-05 15:28:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:28:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-05 15:28:30] apptainer works
[2025-06-05 15:28:30] Set ATHENA_PROC_NUMBER=4
[2025-06-05 15:28:30] Set ATHENA_CORE_NUMBER=4
[2025-06-05 15:28:30] Starting ATLAS job with PandaID=6677978001
[2025-06-05 15:28:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:43:55]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:43:55] 2025-06-05 15:40:04,617 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 17:43:55] 2025-06-05 15:40:05,270 | INFO     | monitor loop #578: job 0:6677978001 is in state 'finished'
[2025-06-05 17:43:55] 2025-06-05 15:40:05,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:43:55] 2025-06-05 15:40:07,773 | INFO     | monitor loop #579: job 0:6677978001 is in state 'finished'
[2025-06-05 17:43:55] 2025-06-05 15:40:07,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:43:55] 2025-06-05 15:40:10,277 | INFO     | monitor loop #580: job 0:6677978001 is in state 'finished'
[2025-06-05 17:43:55] 2025-06-05 15:40:10,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:43:55] 2025-06-05 15:40:11,193 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 17:43:55] 2025-06-05 15:40:11,193 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677978001/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:43:55] 2025-06-05 15:40:11,194 | INFO     | extracted standard info from prmon json
[2025-06-05 17:43:55] 2025-06-05 15:40:11,194 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:43:55] 2025-06-05 15:40:11,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:43:55] 2025-06-05 15:40:11,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:43:55] 2025-06-05 15:40:11,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:43:55] 2025-06-05 15:40:11,198 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:43:55] 2025-06-05 15:40:11,198 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,199 | INFO     | sum of deviations: -15950493012.000002
[2025-06-05 17:43:55] 2025-06-05 15:40:11,199 | INFO     | mean x: 1749134052.0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,199 | INFO     | mean y: 2395290.100775194
[2025-06-05 17:43:55] 2025-06-05 15:40:11,199 | INFO     | -- intersect: 41918001309.80349
[2025-06-05 17:43:55] 2025-06-05 15:40:11,199 | INFO     | intersect: 41918001309.80349
[2025-06-05 17:43:55] 2025-06-05 15:40:11,199 | INFO     | chi2: 1.8674075344451768
[2025-06-05 17:43:55] 2025-06-05 15:40:11,199 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,200 | INFO     | sum of deviations: -14754635866.499996
[2025-06-05 17:43:55] 2025-06-05 15:40:11,200 | INFO     | mean x: 1749133899.5
[2025-06-05 17:43:55] 2025-06-05 15:40:11,200 | INFO     | mean y: 2397741.2983870967
[2025-06-05 17:43:55] 2025-06-05 15:40:11,200 | INFO     | -- intersect: 43657631607.77075
[2025-06-05 17:43:55] 2025-06-05 15:40:11,200 | INFO     | intersect: 43657631607.77075
[2025-06-05 17:43:55] 2025-06-05 15:40:11,201 | INFO     | chi2: 1.8631135820757052
[2025-06-05 17:43:55] 2025-06-05 15:40:11,201 | INFO     | current chi2=1.8631135820757052 (change=0.22994190021555103 %)
[2025-06-05 17:43:55] 2025-06-05 15:40:11,201 | INFO     | right removable region: 123
[2025-06-05 17:43:55] 2025-06-05 15:40:11,201 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,202 | INFO     | sum of deviations: -34578606125.5
[2025-06-05 17:43:55] 2025-06-05 15:40:11,202 | INFO     | mean x: 1749134204.5
[2025-06-05 17:43:55] 2025-06-05 15:40:11,202 | INFO     | mean y: 2432740.7822580645
[2025-06-05 17:43:55] 2025-06-05 15:40:11,202 | INFO     | -- intersect: 102311795985.30193
[2025-06-05 17:43:55] 2025-06-05 15:40:11,202 | INFO     | intersect: 102311795985.30193
[2025-06-05 17:43:55] 2025-06-05 15:40:11,202 | INFO     | chi2: 0.2703114276869311
[2025-06-05 17:43:55] 2025-06-05 15:40:11,202 | INFO     | current chi2=0.2703114276869311 (change=85.5247757813485 %)
[2025-06-05 17:43:55] 2025-06-05 15:40:11,203 | INFO     | sum of square deviations: 522502820.0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,203 | INFO     | sum of deviations: -30199824916.999996
[2025-06-05 17:43:55] 2025-06-05 15:40:11,203 | INFO     | mean x: 1749134357.0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,203 | INFO     | mean y: 2422965.4285714286
[2025-06-05 17:43:55] 2025-06-05 15:40:11,203 | INFO     | -- intersect: 101099583240.48578
[2025-06-05 17:43:55] 2025-06-05 15:40:11,204 | INFO     | intersect: 101099583240.48578
[2025-06-05 17:43:55] 2025-06-05 15:40:11,204 | INFO     | chi2: 0.266801292063867
[2025-06-05 17:43:55] 2025-06-05 15:40:11,204 | INFO     | current chi2=0.266801292063867 (change=1.2985524337985035 %)
[2025-06-05 17:43:55] 2025-06-05 15:40:11,204 | INFO     | left removable region: 20
[2025-06-05 17:43:55] 2025-06-05 15:40:11,204 | INFO     | sum of square deviations: 338804492.0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,205 | INFO     | sum of deviations: -18247070422.0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,205 | INFO     | mean x: 1749134479.0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,205 | INFO     | mean y: 2399397.796116505
[2025-06-05 17:43:55] 2025-06-05 15:40:11,205 | INFO     | -- intersect: 94205932023.51254
[2025-06-05 17:43:55] 2025-06-05 15:40:11,205 | INFO     | intersect: 94205932023.51254
[2025-06-05 17:43:55] 2025-06-05 15:40:11,205 | INFO     | chi2: 0.23305996025610648
[2025-06-05 17:43:55] 2025-06-05 15:40:11,205 | INFO     | -- intersect: 94205932023.51254
[2025-06-05 17:43:55] 2025-06-05 15:40:11,206 | INFO     | current memory leak: -53.86 B/s (using 103 data points, chi2=0.23)
[2025-06-05 17:43:55] 2025-06-05 15:40:11,206 | INFO     | ..............................
[2025-06-05 17:43:55] 2025-06-05 15:40:11,206 | INFO     | . Timing measurements:
[2025-06-05 17:43:55] 2025-06-05 15:40:11,206 | INFO     | . get job = 0 s
[2025-06-05 17:43:55] 2025-06-05 15:40:11,206 | INFO     | . initial setup = 1 s
[2025-06-05 17:43:55] 2025-06-05 15:40:11,206 | INFO     | . payload setup = 7 s
[2025-06-05 17:43:55] 2025-06-05 15:40:11,206 | INFO     | . stage-in = 0 s
[2025-06-05 17:43:55] 2025-06-05 15:40:11,207 | INFO     | . payload execution = 7854 s
[2025-06-05 17:43:55] 2025-06-05 15:40:11,207 | INFO     | . stage-out = 1 s
[2025-06-05 17:43:55] 2025-06-05 15:40:11,207 | INFO     | . log creation = 0 s
[2025-06-05 17:43:55] 2025-06-05 15:40:11,207 | INFO     | ..............................
[2025-06-05 17:43:55] 2025-06-05 15:40:11,389 | INFO     | 
[2025-06-05 17:43:55] 2025-06-05 15:40:11,389 | INFO     | job summary report
[2025-06-05 17:43:55] 2025-06-05 15:40:11,389 | INFO     | --------------------------------------------------
[2025-06-05 17:43:55] 2025-06-05 15:40:11,389 | INFO     | PanDA job id: 6677978001
[2025-06-05 17:43:55] 2025-06-05 15:40:11,389 | INFO     | task id: 45006595
[2025-06-05 17:43:55] 2025-06-05 15:40:11,389 | INFO     | errors: (none)
[2025-06-05 17:43:55] 2025-06-05 15:40:11,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:43:55] 2025-06-05 15:40:11,389 | INFO     | pilot state: finished 
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | transexitcode: 0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | exeerrorcode: 0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | exeerrordiag: 
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | exitcode: 0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | exitmsg: OK
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | cpuconsumptiontime: 30075 s
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | nevents: 400
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | neventsw: 0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | pid: 2856529
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | pgrp: 2856529
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | corecount: 4
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | event service: False
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | sizes: {0: 2396514, 1: 2397381, 6: 2397587, 12: 2397615, 7865: 2425072, 7867: 2434219, 7875: 2434333}
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | --------------------------------------------------
[2025-06-05 17:43:55] 2025-06-05 15:40:11,390 | INFO     | 
[2025-06-05 17:43:55] 2025-06-05 15:40:11,391 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-05 17:43:55] 2025-06-05 15:40:11,409 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,410 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,410 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,410 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,410 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,411 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:43:55] 2025-06-05 15:40:11,412 | INFO     | job 6677978001 has completed (purged errors)
[2025-06-05 17:43:55] 2025-06-05 15:40:11,412 | INFO     | overall cleanup function is called
[2025-06-05 17:43:55] 2025-06-05 15:40:12,419 | INFO     | --- collectZombieJob: --- 10, [2856529]
[2025-06-05 17:43:55] 2025-06-05 15:40:12,419 | INFO     | zombie collector waiting for pid 2856529
[2025-06-05 17:43:55] 2025-06-05 15:40:12,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:43:55] 2025-06-05 15:40:12,420 | INFO     | collected zombie processes
[2025-06-05 17:43:55] 2025-06-05 15:40:12,420 | INFO     | will attempt to kill all subprocesses of pid=2856529
[2025-06-05 17:43:55] 2025-06-05 15:40:12,754 | INFO     | process IDs to be killed: [2856529] (in reverse order)
[2025-06-05 17:43:55] 2025-06-05 15:40:12,849 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:43:55] 2025-06-05 15:40:12,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:43:55] 2025-06-05 15:40:12,860 | INFO     | did not find any defunct processes belonging to 2856529
[2025-06-05 17:43:55] 2025-06-05 15:40:12,870 | INFO     | did not find any defunct processes belonging to 2856529
[2025-06-05 17:43:55] 2025-06-05 15:40:12,870 | INFO     | ready for new job
[2025-06-05 17:43:55] 2025-06-05 15:40:12,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:43:55] 2025-06-05 15:40:12,872 | INFO     | **************************************
[2025-06-05 17:43:55] 2025-06-05 15:40:12,872 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:43:55] 2025-06-05 15:40:12,872 | INFO     | **************************************
[2025-06-05 17:43:55] 2025-06-05 15:40:12,872 | INFO     | 
[2025-06-05 17:43:55] 2025-06-05 15:40:12,876 | INFO     | architecture information:
[2025-06-05 17:43:55] 2025-06-05 15:40:12,876 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:43:55] 2025-06-05 15:40:12,890 | INFO     | cat /etc/os-release:
[2025-06-05 17:43:55] NAME="CentOS Linux"
[2025-06-05 17:43:55] VERSION="7 (Core)"
[2025-06-05 17:43:55] ID="centos"
[2025-06-05 17:43:55] ID_LIKE="rhel fedora"
[2025-06-05 17:43:55] VERSION_ID="7"
[2025-06-05 17:43:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:43:55] ANSI_COLOR="0;31"
[2025-06-05 17:43:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:43:55] HOME_URL="https://www.centos.org/"
[2025-06-05 17:43:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:43:55] 
[2025-06-05 17:43:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:43:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:43:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:43:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:43:55] 
[2025-06-05 17:43:55] 2025-06-05 15:40:12,890 | INFO     | **************************************
[2025-06-05 17:43:55] 2025-06-05 15:40:13,393 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-05 17:43:55] 2025-06-05 15:40:13,407 | INFO     | sufficient remaining disk space (660047134720 B)
[2025-06-05 17:43:55] 2025-06-05 15:40:13,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:43:55] 2025-06-05 15:40:13,408 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:43:55] 2025-06-05 15:40:13,408 | INFO     | update_server=False
[2025-06-05 17:43:55] 2025-06-05 15:40:13,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:43:55] 2025-06-05 15:40:13,408 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 17:43:55] 2025-06-05 15:40:13,409 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:43:55] 2025-06-05 15:40:13,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:43:55] 2025-06-05 15:40:13,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:43:55] 2025-06-05 15:40:13,445 | INFO     | all payload control threads have been joined
[2025-06-05 17:43:55] 2025-06-05 15:40:13,541 | INFO     | all data control threads have been joined
[2025-06-05 17:43:55] 2025-06-05 15:40:13,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:43:55] 2025-06-05 15:40:13,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:43:55] 2025-06-05 15:40:13,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:43:55] 2025-06-05 15:40:13,792 | INFO     | aborting loop
[2025-06-05 17:43:55] 2025-06-05 15:40:14,410 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:14,450 | INFO     | [payload] control thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:14,547 | INFO     | [data] control thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:14,665 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:14,744 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:14,782 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:14,798 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:14,882 | INFO     | all job control threads have been joined
[2025-06-05 17:43:55] 2025-06-05 15:40:14,926 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:15,457 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:15,616 | INFO     | [job] validate thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:15,661 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:15,867 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:15,888 | INFO     | [job] control thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:15,897 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:16,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:43:55] 2025-06-05 15:40:17,317 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:17,756 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:43:55] 2025-06-05 15:40:17,762 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22656896300864)>', '<ExcThread(monitor, started 22656650790656)>']
[2025-06-05 17:43:55] 2025-06-05 15:40:18,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:43:55] 2025-06-05 15:40:18,434 | INFO     | [monitor] control thread has ended
[2025-06-05 17:43:55] 2025-06-05 15:40:22,787 | INFO     | all workflow threads have been joined
[2025-06-05 17:43:55] 2025-06-05 15:40:22,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:43:55] 2025-06-05 15:40:22,788 | INFO     | traces error code: 0
[2025-06-05 17:43:55] 2025-06-05 15:40:22,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:43:55] 2025-06-05 15:40:22,914 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:43:55] 2025-06-05 15:40:22,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:43:55] 2025-06-05 15:40:22,919 [wrapper] pilotpid: 2849453
[2025-06-05 17:43:55] 2025-06-05 15:40:22,922 [wrapper] Pilot exit status: 0
[2025-06-05 17:43:55] 2025-06-05 15:40:22,932 [wrapper] pandaids: 6677978001
[2025-06-05 17:43:55] 2025-06-05 15:40:23,006 [wrapper] cleanup supervisor_pilot 3048688 2849454
[2025-06-05 17:43:55] 2025-06-05 15:40:23,009 [wrapper] Test setup, not cleaning
[2025-06-05 17:43:55] 2025-06-05 15:40:23,012 [wrapper] apfmon messages muted
[2025-06-05 17:43:55] 2025-06-05 15:40:23,015 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:43:55] 2025-06-05 15:40:23,018 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:43:55]  *** Error codes and diagnostics ***
[2025-06-05 17:43:55]     "exeErrorCode": 0,
[2025-06-05 17:43:55]     "exeErrorDiag": "",
[2025-06-05 17:43:55]     "pilotErrorCode": 0,
[2025-06-05 17:43:55]     "pilotErrorDiag": "",
[2025-06-05 17:43:55]  *** Listing of results directory ***
[2025-06-05 17:43:55] total 386388
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:16 queuedata.json
[2025-06-05 17:43:55] -rwx------ 1 boinc boinc     37140 Jun  3 21:16 runpilot2-wrapper.sh
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc       100 Jun  5 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:43:55] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 15:28 run_atlas
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc       105 Jun  5 15:28 job.xml
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc      6636 Jun  5 15:28 init_data.xml
[2025-06-05 17:43:55] -rw-r--r-- 2 boinc boinc 214250649 Jun  5 15:28 EVNT.45006593._001753.pool.root.1
[2025-06-05 17:43:55] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:28 start_atlas.sh
[2025-06-05 17:43:55] drwxrwx--x 2 boinc boinc      4096 Jun  5 15:28 shared
[2025-06-05 17:43:55] -rw-r--r-- 2 boinc boinc    508883 Jun  5 15:28 input.tar.gz
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc         0 Jun  5 15:28 boinc_lockfile
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc      2525 Jun  5 15:28 pandaJob.out
[2025-06-05 17:43:55] -rw------- 1 boinc boinc    983210 Jun  5 15:28 agis_schedconf.cvmfs.json
[2025-06-05 17:43:55] -rw------- 1 boinc boinc   1598969 Jun  5 15:28 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:43:55] drwx------ 4 boinc boinc      4096 Jun  5 15:28 pilot3
[2025-06-05 17:43:55] -rw------- 1 boinc boinc 175525602 Jun  5 17:39 HITS.45006595._043731.pool.root.1
[2025-06-05 17:43:55] -rw------- 1 boinc boinc        95 Jun  5 17:39 pilot_heartbeat.json
[2025-06-05 17:43:55] -rw------- 1 boinc boinc      1034 Jun  5 17:39 memory_monitor_summary.json
[2025-06-05 17:43:55] -rw------- 1 boinc boinc    271949 Jun  5 17:40 log.45006595._043731.job.log.tgz.1
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc       528 Jun  5 17:40 boinc_task_state.xml
[2025-06-05 17:43:55] -rw------- 1 boinc boinc      7725 Jun  5 17:40 heartbeat.json
[2025-06-05 17:43:55] -rw------- 1 boinc boinc      4486 Jun  5 17:40 pilotlog.txt
[2025-06-05 17:43:55] -rw------- 1 boinc boinc    755104 Jun  5 17:40 log.45006595._043731.job.log.1
[2025-06-05 17:43:55] -rw------- 1 boinc boinc       357 Jun  5 17:40 output.list
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc       620 Jun  5 17:40 runtime_log
[2025-06-05 17:43:55] -rw------- 1 boinc boinc   1044480 Jun  5 17:40 result.tar.gz
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc      9025 Jun  5 17:40 runtime_log.err
[2025-06-05 17:43:55] -rw------- 1 boinc boinc       662 Jun  5 17:40 BcSNDmxImg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhjZKDmsBipPm.diag
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc        26 Jun  5 17:43 wrapper_checkpoint.txt
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc      8192 Jun  5 17:43 boinc_mmap_file
[2025-06-05 17:43:55] -rw-r--r-- 1 boinc boinc     20976 Jun  5 17:43 stderr.txt
[2025-06-05 17:43:55] HITS file was successfully produced:
[2025-06-05 17:43:55] -rw------- 1 boinc boinc 175525602 Jun  5 17:39 shared/HITS.pool.root.1
[2025-06-05 17:43:55]  *** Contents of shared directory: ***
[2025-06-05 17:43:55] total 382188
[2025-06-05 17:43:55] -rw-r--r-- 2 boinc boinc 214250649 Jun  5 15:28 ATLAS.root_0
[2025-06-05 17:43:55] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:28 start_atlas.sh
[2025-06-05 17:43:55] -rw-r--r-- 2 boinc boinc    508883 Jun  5 15:28 input.tar.gz
[2025-06-05 17:43:55] -rw------- 1 boinc boinc 175525602 Jun  5 17:39 HITS.pool.root.1
[2025-06-05 17:43:55] -rw------- 1 boinc boinc   1044480 Jun  5 17:40 result.tar.gz
17:43:57 (2845743): run_atlas exited; CPU time 30350.952489
17:43:57 (2845743): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN