Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:28:26 (1546430): wrapper (7.7.26015): starting
09:28:26 (1546430): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 09:28:26] Arguments: --nthreads 3
[2025-06-04 09:28:26] Threads: 3
[2025-06-04 09:28:26] Checking for CVMFS
[2025-06-04 09:28:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:28:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:28:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:28:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:28:26] 2.9.2.0 902724 2168 68608 146772 3 55 29006935 36864001 0 130560 0 1738558 99.992 523079 40212 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 09:28:26] CVMFS is ok
[2025-06-04 09:28:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:28:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:28:26] Further information can be found at the LHC@home message board.
[2025-06-04 09:28:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:28:26] Checking for apptainer binary...
[2025-06-04 09:28:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:28:26] Running /usr/bin/apptainer --version
[2025-06-04 09:28:26] apptainer version 1.3.6-6.1
[2025-06-04 09:28:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:28:27] thA383
[2025-06-04 09:28:27] apptainer works
[2025-06-04 09:28:27] Set ATHENA_PROC_NUMBER=3
[2025-06-04 09:28:27] Set ATHENA_CORE_NUMBER=3
[2025-06-04 09:28:27] Starting ATLAS job with PandaID=6677975910
[2025-06-04 09:28:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:55:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:55:30]  protocol_id=None
[2025-06-04 10:55:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:55:30]  replicas=None
[2025-06-04 10:55:30]  scope=mc23_13p6TeV
[2025-06-04 10:55:30]  status=None
[2025-06-04 10:55:30]  status_code=0
[2025-06-04 10:55:30]  storage_token=
[2025-06-04 10:55:30]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677975910/log.45006595._043001.job.log.tgz.1
[2025-06-04 10:55:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/07/log.45006595._043001.job.log.tgz.1
[2025-06-04 10:55:30]  workdir=None
[2025-06-04 10:55:30] ]
[2025-06-04 10:55:30] 2025-06-04 08:54:48,834 | INFO     | transferring file log.45006595._043001.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677975910/log.45006595._043001.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 10:55:30] 2025-06-04 08:54:48,834 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677975910/log.45006595._043001.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0430
[2025-06-04 10:55:30] 2025-06-04 08:54:48,847 | INFO     | adding to output.list: log.45006595._043001.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/07/log.45006595._043001.job.log.tg
[2025-06-04 10:55:30] 2025-06-04 08:54:48,848 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:55:30] 2025-06-04 08:54:48,848 | INFO     | summary of transferred files:
[2025-06-04 10:55:30] 2025-06-04 08:54:48,848 | INFO     |  -- lfn=log.45006595._043001.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:55:30] 2025-06-04 08:54:48,848 | INFO     | stage-out finished correctly
[2025-06-04 10:55:30] 2025-06-04 08:54:48,881 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:55:30] 2025-06-04 08:54:49,949 | INFO     | job 6677975910 has state=finished
[2025-06-04 10:55:30] 2025-06-04 08:54:49,949 | INFO     | preparing for final server update for job 6677975910 in state='finished'
[2025-06-04 10:55:30] 2025-06-04 08:54:49,950 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:55:30] 2025-06-04 08:54:49,950 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:55:30] 2025-06-04 08:54:49,950 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:55:30] 2025-06-04 08:54:49,951 | INFO     | job 6677975910 has finished - writing final server update
[2025-06-04 10:55:30] 2025-06-04 08:54:49,951 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:55:30] 2025-06-04 08:54:49,953 | INFO     | executing command: lscpu
[2025-06-04 10:55:30] 2025-06-04 08:54:49,968 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:55:30] 2025-06-04 08:54:50,063 | INFO     | PID=1550073 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 10:55:30] 2025-06-04 08:54:52,808 | WARNING  | process 1556575 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:55:30] 2025-06-04 08:54:52,808 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677975910/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:55:30] 2025-06-04 08:54:52,857 | INFO     | number of running child processes to parent process 1556575: 1
[2025-06-04 10:55:30] 2025-06-04 08:54:52,857 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:55:30] 2025-06-04 08:54:55,360 | INFO     | monitor loop #398: job 0:6677975910 is in state 'finished'
[2025-06-04 10:55:30] 2025-06-04 08:54:55,360 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:55:30] 2025-06-04 08:54:57,862 | INFO     | monitor loop #399: job 0:6677975910 is in state 'finished'
[2025-06-04 10:55:30] 2025-06-04 08:54:57,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:55:30] 2025-06-04 08:54:58,038 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:55:30] 2025-06-04 08:54:58,039 | INFO     | found 6 cores (6 cores per socket, 1 sockets) HT, CPU MHz: 4008.0038333333328
[2025-06-04 10:55:30] 2025-06-04 08:54:58,040 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677975910/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:55:30] 2025-06-04 08:54:58,040 | INFO     | extracted standard info from prmon json
[2025-06-04 10:55:30] 2025-06-04 08:54:58,040 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:55:30] 2025-06-04 08:54:58,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:55:30] 2025-06-04 08:54:58,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:55:30] 2025-06-04 08:54:58,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:55:30] 2025-06-04 08:54:58,041 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:55:30] 2025-06-04 08:54:58,041 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 10:55:30] 2025-06-04 08:54:58,041 | INFO     | sum of deviations: -14318420840.5
[2025-06-04 10:55:30] 2025-06-04 08:54:58,041 | INFO     | mean x: 1749024796.5
[2025-06-04 10:55:30] 2025-06-04 08:54:58,041 | INFO     | mean y: 2515346.858974359
[2025-06-04 10:55:30] 2025-06-04 08:54:58,041 | INFO     | -- intersect: 170218462753.91205
[2025-06-04 10:55:30] 2025-06-04 08:54:58,041 | INFO     | intersect: 170218462753.91205
[2025-06-04 10:55:30] 2025-06-04 08:54:58,041 | INFO     | chi2: 0.04203195611010907
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | -- intersect: 170218462753.91205
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | current memory leak: -97.32 B/s (using 78 data points, chi2=0.04)
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | could have reported an average CPU frequency of 4051 MHz (6 samples)
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | ..............................
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | . Timing measurements:
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | . get job = 0 s
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | . initial setup = 1 s
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | . payload setup = 7 s
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | . stage-in = 0 s
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | . payload execution = 5145 s
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | . stage-out = 0 s
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | . log creation = 0 s
[2025-06-04 10:55:30] 2025-06-04 08:54:58,042 | INFO     | ..............................
[2025-06-04 10:55:30] 2025-06-04 08:54:58,074 | INFO     | 
[2025-06-04 10:55:30] 2025-06-04 08:54:58,074 | INFO     | job summary report
[2025-06-04 10:55:30] 2025-06-04 08:54:58,074 | INFO     | --------------------------------------------------
[2025-06-04 10:55:30] 2025-06-04 08:54:58,074 | INFO     | PanDA job id: 6677975910
[2025-06-04 10:55:30] 2025-06-04 08:54:58,074 | INFO     | task id: 45006595
[2025-06-04 10:55:30] 2025-06-04 08:54:58,074 | INFO     | errors: (none)
[2025-06-04 10:55:30] 2025-06-04 08:54:58,074 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:55:30] 2025-06-04 08:54:58,074 | INFO     | pilot state: finished 
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | transexitcode: 0
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | exeerrorcode: 0
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | exeerrordiag: 
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | exitcode: 0
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | exitmsg: OK
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | cpuconsumptiontime: 14809 s
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | nevents: 400
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | neventsw: 0
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | pid: 1556575
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | pgrp: 1556575
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | corecount: 3
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | event service: False
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | sizes: {0: 2405528, 7: 2405790, 11: 2405818, 5155: 2432350, 5156: 2441352, 5165: 2441490}
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | --------------------------------------------------
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | 
[2025-06-04 10:55:30] 2025-06-04 08:54:58,075 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 10:55:30] 2025-06-04 08:54:58,088 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | job 6677975910 has completed (purged errors)
[2025-06-04 10:55:30] 2025-06-04 08:54:58,089 | INFO     | overall cleanup function is called
[2025-06-04 10:55:30] 2025-06-04 08:54:59,095 | INFO     | --- collectZombieJob: --- 10, [1556575]
[2025-06-04 10:55:30] 2025-06-04 08:54:59,096 | INFO     | zombie collector waiting for pid 1556575
[2025-06-04 10:55:30] 2025-06-04 08:54:59,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:55:30] 2025-06-04 08:54:59,096 | INFO     | collected zombie processes
[2025-06-04 10:55:30] 2025-06-04 08:54:59,096 | INFO     | will attempt to kill all subprocesses of pid=1556575
[2025-06-04 10:55:30] 2025-06-04 08:54:59,136 | INFO     | process IDs to be killed: [1556575] (in reverse order)
[2025-06-04 10:55:30] 2025-06-04 08:54:59,163 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:55:30] 2025-06-04 08:54:59,163 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:55:30] 2025-06-04 08:54:59,164 | INFO     | did not find any defunct processes belonging to 1556575
[2025-06-04 10:55:30] 2025-06-04 08:54:59,165 | INFO     | did not find any defunct processes belonging to 1556575
[2025-06-04 10:55:30] 2025-06-04 08:54:59,165 | INFO     | ready for new job
[2025-06-04 10:55:30] 2025-06-04 08:54:59,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:55:30] 2025-06-04 08:54:59,166 | INFO     | ***************************************
[2025-06-04 10:55:30] 2025-06-04 08:54:59,166 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-04 10:55:30] 2025-06-04 08:54:59,166 | INFO     | ***************************************
[2025-06-04 10:55:30] 2025-06-04 08:54:59,166 | INFO     | 
[2025-06-04 10:55:30] 2025-06-04 08:54:59,166 | INFO     | architecture information:
[2025-06-04 10:55:30] 2025-06-04 08:54:59,166 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:55:30] 2025-06-04 08:54:59,177 | INFO     | cat /etc/os-release:
[2025-06-04 10:55:30] NAME="CentOS Linux"
[2025-06-04 10:55:30] VERSION="7 (Core)"
[2025-06-04 10:55:30] ID="centos"
[2025-06-04 10:55:30] ID_LIKE="rhel fedora"
[2025-06-04 10:55:30] VERSION_ID="7"
[2025-06-04 10:55:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:55:30] ANSI_COLOR="0;31"
[2025-06-04 10:55:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:55:30] HOME_URL="https://www.centos.org/"
[2025-06-04 10:55:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:55:30] 
[2025-06-04 10:55:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:55:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:55:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:55:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:55:30] 
[2025-06-04 10:55:30] 2025-06-04 08:54:59,177 | INFO     | ***************************************
[2025-06-04 10:55:30] 2025-06-04 08:54:59,681 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 10:55:30] 2025-06-04 08:54:59,694 | INFO     | sufficient remaining disk space (828091924480 B)
[2025-06-04 10:55:30] 2025-06-04 08:54:59,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:55:30] 2025-06-04 08:54:59,694 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:55:30] 2025-06-04 08:54:59,694 | INFO     | update_server=False
[2025-06-04 10:55:30] 2025-06-04 08:54:59,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:55:30] 2025-06-04 08:54:59,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:55:30] 2025-06-04 08:54:59,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:55:30] 2025-06-04 08:54:59,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:55:30] 2025-06-04 08:54:59,694 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:55:30] 2025-06-04 08:54:59,695 | INFO     | aborting loop
[2025-06-04 10:55:30] 2025-06-04 08:54:59,709 | INFO     | all job control threads have been joined
[2025-06-04 10:55:30] 2025-06-04 08:55:00,255 | INFO     | all data control threads have been joined
[2025-06-04 10:55:30] 2025-06-04 08:55:00,267 | INFO     | all payload control threads have been joined
[2025-06-04 10:55:30] 2025-06-04 08:55:00,700 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:00,700 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:00,701 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:00,715 | INFO     | [job] control thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:00,775 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:00,807 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:01,261 | INFO     | [data] control thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:01,272 | INFO     | [payload] control thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:01,508 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:01,573 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:01,701 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:01,736 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:01,737 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:01,788 | INFO     | [job] validate thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:03,702 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:10,060 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:55:30] 2025-06-04 08:55:11,066 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:55:30] 2025-06-04 08:55:12,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871377020736)>', '<ExcThread(monitor, started 139870861235968)>']
[2025-06-04 10:55:30] 2025-06-04 08:55:17,675 | INFO     | all workflow threads have been joined
[2025-06-04 10:55:30] 2025-06-04 08:55:17,675 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:55:30] 2025-06-04 08:55:17,676 | INFO     | traces error code: 0
[2025-06-04 10:55:30] 2025-06-04 08:55:17,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:55:30] 2025-06-04 08:55:30,205 | INFO     | PID=1550073 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 10:55:30] 2025-06-04 08:55:30,206 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:55:30] 2025-06-04 08:55:30,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:55:30] 2025-06-04 08:55:30,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:55:30] 2025-06-04 08:55:30,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:55:30] 2025-06-04 08:55:30,206 | INFO     | [monitor] control thread has ended
[2025-06-04 10:55:30] 2025-06-04 08:55:30,251 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:55:30] 2025-06-04 08:55:30,254 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:55:30] 2025-06-04 08:55:30,257 [wrapper] pilotpid: 1550073
[2025-06-04 10:55:30] 2025-06-04 08:55:30,260 [wrapper] Pilot exit status: 0
[2025-06-04 10:55:30] 2025-06-04 08:55:30,267 [wrapper] pandaids: 6677975910
[2025-06-04 10:55:30] 2025-06-04 08:55:30,285 [wrapper] cleanup supervisor_pilot 1568709 1550074
[2025-06-04 10:55:30] 2025-06-04 08:55:30,288 [wrapper] Test setup, not cleaning
[2025-06-04 10:55:30] 2025-06-04 08:55:30,290 [wrapper] apfmon messages muted
[2025-06-04 10:55:30] 2025-06-04 08:55:30,293 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:55:30] 2025-06-04 08:55:30,295 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:55:30]  *** Error codes and diagnostics ***
[2025-06-04 10:55:30]     "exeErrorCode": 0,
[2025-06-04 10:55:30]     "exeErrorDiag": "",
[2025-06-04 10:55:30]     "pilotErrorCode": 0,
[2025-06-04 10:55:30]     "pilotErrorDiag": "",
[2025-06-04 10:55:30]  *** Listing of results directory ***
[2025-06-04 10:55:30] total 397568
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc    549845 Jun  2 11:40 pilot3.tar.gz
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:02 queuedata.json
[2025-06-04 10:55:30] -rwx------ 1 boinc boinc     37140 Jun  3 21:03 runpilot2-wrapper.sh
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:55:30] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:28 run_atlas
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:28 job.xml
[2025-06-04 10:55:30] -rw-r--r-- 2 boinc boinc 217085994 Jun  4 09:28 EVNT.45006593._001724.pool.root.1
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc      6679 Jun  4 09:28 init_data.xml
[2025-06-04 10:55:30] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:28 shared
[2025-06-04 10:55:30] -rw-r--r-- 2 boinc boinc    564119 Jun  4 09:28 input.tar.gz
[2025-06-04 10:55:30] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:28 start_atlas.sh
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:28 boinc_lockfile
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc      2525 Jun  4 09:28 pandaJob.out
[2025-06-04 10:55:30] -rw------- 1 boinc boinc    986745 Jun  4 09:28 agis_schedconf.cvmfs.json
[2025-06-04 10:55:30] -rw------- 1 boinc boinc   1603667 Jun  4 09:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:55:30] drwx------ 6 boinc boinc      4096 Jun  4 09:28 pilot3
[2025-06-04 10:55:30] -rw------- 1 boinc boinc 184624379 Jun  4 10:54 HITS.45006595._043001.pool.root.1
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:54 boinc_task_state.xml
[2025-06-04 10:55:30] -rw------- 1 boinc boinc      1019 Jun  4 10:54 memory_monitor_summary.json
[2025-06-04 10:55:30] -rw------- 1 boinc boinc    224001 Jun  4 10:54 log.45006595._043001.job.log.tgz.1
[2025-06-04 10:55:30] -rw------- 1 boinc boinc      7683 Jun  4 10:54 heartbeat.json
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc        27 Jun  4 10:55 wrapper_checkpoint.txt
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:55 boinc_mmap_file
[2025-06-04 10:55:30] -rw------- 1 boinc boinc       747 Jun  4 10:55 pilotlog.txt
[2025-06-04 10:55:30] -rw------- 1 boinc boinc        95 Jun  4 10:55 pilot_heartbeat.json
[2025-06-04 10:55:30] -rw------- 1 boinc boinc    506339 Jun  4 10:55 log.45006595._043001.job.log.1
[2025-06-04 10:55:30] -rw------- 1 boinc boinc       357 Jun  4 10:55 output.list
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:55 runtime_log
[2025-06-04 10:55:30] -rw------- 1 boinc boinc    747520 Jun  4 10:55 result.tar.gz
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc      8733 Jun  4 10:55 runtime_log.err
[2025-06-04 10:55:30] -rw------- 1 boinc boinc       658 Jun  4 10:55 bmGNDmR6lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsolKDmFx3iNm.diag
[2025-06-04 10:55:30] -rw-r--r-- 1 boinc boinc     21919 Jun  4 10:55 stderr.txt
[2025-06-04 10:55:30] HITS file was successfully produced:
[2025-06-04 10:55:30] -rw------- 1 boinc boinc 184624379 Jun  4 10:54 shared/HITS.pool.root.1
[2025-06-04 10:55:30]  *** Contents of shared directory: ***
[2025-06-04 10:55:30] total 393608
[2025-06-04 10:55:30] -rw-r--r-- 2 boinc boinc 217085994 Jun  4 09:28 ATLAS.root_0
[2025-06-04 10:55:30] -rw-r--r-- 2 boinc boinc    564119 Jun  4 09:28 input.tar.gz
[2025-06-04 10:55:30] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:28 start_atlas.sh
[2025-06-04 10:55:30] -rw------- 1 boinc boinc 184624379 Jun  4 10:54 HITS.pool.root.1
[2025-06-04 10:55:30] -rw------- 1 boinc boinc    747520 Jun  4 10:55 result.tar.gz
10:55:31 (1546430): run_atlas exited; CPU time 14835.220699
10:55:31 (1546430): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN