Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:48:50 (1087): wrapper (7.7.26015): starting
09:48:50 (1087): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:48:50] Arguments: --nthreads 8
[2025-06-04 09:48:50] Threads: 8
[2025-06-04 09:48:50] Checking for CVMFS
[2025-06-04 09:48:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:48:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:48:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:48:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:48:51] 2.11.2.0 12075 32922 88760 146772 0 93 13465492 25165824 3749 130560 0 17354430 99.767 20426404 2172 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 09:48:51] CVMFS is ok
[2025-06-04 09:48:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:48:52] Checking for apptainer binary...
[2025-06-04 09:48:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:48:52] Running /usr/bin/apptainer --version
[2025-06-04 09:48:52] apptainer version 1.3.2-1.el7
[2025-06-04 09:48:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:49:02] cg-vwn258.simple-grid.lan
[2025-06-04 09:49:02] apptainer works
[2025-06-04 09:49:02] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:49:02] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:49:02] Starting ATLAS job with PandaID=6677976685
[2025-06-04 09:49:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:56:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:56:55] 2025-06-04 11:55:51,205 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677976685/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:56:55] 2025-06-04 11:55:51,206 | INFO     | extracted standard info from prmon json
[2025-06-04 13:56:55] 2025-06-04 11:55:51,206 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:56:55] 2025-06-04 11:55:51,206 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:56:55] 2025-06-04 11:55:51,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:56:55] 2025-06-04 11:55:51,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:56:55] 2025-06-04 11:55:51,213 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:56:55] 2025-06-04 11:55:51,213 | INFO     | sum of square deviations: 3822136780.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,215 | INFO     | sum of deviations: 100508663915.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,216 | INFO     | mean x: 1749031031.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,216 | INFO     | mean y: 2407953.865800866
[2025-06-04 13:56:55] 2025-06-04 11:55:51,216 | INFO     | -- intersect: -45990915202.843666
[2025-06-04 13:56:55] 2025-06-04 11:55:51,216 | INFO     | intersect: -45990915202.843666
[2025-06-04 13:56:55] 2025-06-04 11:55:51,216 | INFO     | chi2: 6.91882127641937
[2025-06-04 13:56:55] 2025-06-04 11:55:51,217 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 13:56:55] 2025-06-04 11:55:51,225 | INFO     | sum of deviations: 113258667578.5
[2025-06-04 13:56:55] 2025-06-04 11:55:51,233 | INFO     | mean x: 1749030878.5
[2025-06-04 13:56:55] 2025-06-04 11:55:51,233 | INFO     | mean y: 2415792.225663717
[2025-06-04 13:56:55] 2025-06-04 11:55:51,233 | INFO     | -- intersect: -55341984590.141655
[2025-06-04 13:56:55] 2025-06-04 11:55:51,233 | INFO     | intersect: -55341984590.141655
[2025-06-04 13:56:55] 2025-06-04 11:55:51,233 | INFO     | chi2: 6.203461948297533
[2025-06-04 13:56:55] 2025-06-04 11:55:51,234 | INFO     | current chi2=6.203461948297533 (change=10.339323701855331 %)
[2025-06-04 13:56:55] 2025-06-04 11:55:51,234 | INFO     | right removable region: 225
[2025-06-04 13:56:55] 2025-06-04 11:55:51,234 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 13:56:55] 2025-06-04 11:55:51,236 | INFO     | sum of deviations: 22572418162.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,236 | INFO     | mean x: 1749031183.5
[2025-06-04 13:56:55] 2025-06-04 11:55:51,236 | INFO     | mean y: 2456849.8230088498
[2025-06-04 13:56:55] 2025-06-04 11:55:51,237 | INFO     | -- intersect: -11027667315.626522
[2025-06-04 13:56:55] 2025-06-04 11:55:51,237 | INFO     | intersect: -11027667315.626522
[2025-06-04 13:56:55] 2025-06-04 11:55:51,237 | INFO     | chi2: 2.228992994416091
[2025-06-04 13:56:55] 2025-06-04 11:55:51,237 | INFO     | current chi2=2.228992994416091 (change=67.78363097753495 %)
[2025-06-04 13:56:55] 2025-06-04 11:55:51,238 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,240 | INFO     | sum of deviations: -16028469800.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,240 | INFO     | mean x: 1749031336.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,240 | INFO     | mean y: 2482021.0090497737
[2025-06-04 13:56:55] 2025-06-04 11:55:51,240 | INFO     | -- intersect: 8378609932.104322
[2025-06-04 13:56:55] 2025-06-04 11:55:51,240 | INFO     | intersect: 8378609932.104322
[2025-06-04 13:56:55] 2025-06-04 11:55:51,241 | INFO     | chi2: 0.8615997060985475
[2025-06-04 13:56:55] 2025-06-04 11:55:51,241 | INFO     | current chi2=0.8615997060985475 (change=61.34578671817437 %)
[2025-06-04 13:56:55] 2025-06-04 11:55:51,241 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,243 | INFO     | sum of deviations: -17050870975.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,243 | INFO     | mean x: 1749031488.5
[2025-06-04 13:56:55] 2025-06-04 11:55:51,243 | INFO     | mean y: 2482691.361111111
[2025-06-04 13:56:55] 2025-06-04 11:55:51,243 | INFO     | -- intersect: 9546117829.623703
[2025-06-04 13:56:55] 2025-06-04 11:55:51,244 | INFO     | intersect: 9546117829.623703
[2025-06-04 13:56:55] 2025-06-04 11:55:51,244 | INFO     | chi2: 0.847420689763929
[2025-06-04 13:56:55] 2025-06-04 11:55:51,244 | INFO     | current chi2=0.847420689763929 (change=1.645661695826615 %)
[2025-06-04 13:56:55] 2025-06-04 11:55:51,244 | INFO     | left removable region: 30
[2025-06-04 13:56:55] 2025-06-04 11:55:51,245 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,246 | INFO     | sum of deviations: 4320177624.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,246 | INFO     | mean x: 1749031763.0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,246 | INFO     | mean y: 2487594.0615384616
[2025-06-04 13:56:55] 2025-06-04 11:55:51,246 | INFO     | -- intersect: -3283973255.4805064
[2025-06-04 13:56:55] 2025-06-04 11:55:51,247 | INFO     | intersect: -3283973255.4805064
[2025-06-04 13:56:55] 2025-06-04 11:55:51,247 | INFO     | chi2: 0.000579216711021621
[2025-06-04 13:56:55] 2025-06-04 11:55:51,247 | INFO     | -- intersect: -3283973255.4805064
[2025-06-04 13:56:55] 2025-06-04 11:55:51,247 | INFO     | current memory leak: 1.88 B/s (using 195 data points, chi2=0.00)
[2025-06-04 13:56:55] 2025-06-04 11:55:51,248 | INFO     | ..............................
[2025-06-04 13:56:55] 2025-06-04 11:55:51,248 | INFO     | . Timing measurements:
[2025-06-04 13:56:55] 2025-06-04 11:55:51,248 | INFO     | . get job = 0 s
[2025-06-04 13:56:55] 2025-06-04 11:55:51,249 | INFO     | . initial setup = 5 s
[2025-06-04 13:56:55] 2025-06-04 11:55:51,249 | INFO     | . payload setup = 155 s
[2025-06-04 13:56:55] 2025-06-04 11:55:51,249 | INFO     | . stage-in = 0 s
[2025-06-04 13:56:55] 2025-06-04 11:55:51,249 | INFO     | . payload execution = 14198 s
[2025-06-04 13:56:55] 2025-06-04 11:55:51,249 | INFO     | . stage-out = 3 s
[2025-06-04 13:56:55] 2025-06-04 11:55:51,249 | INFO     | . log creation = 1 s
[2025-06-04 13:56:55] 2025-06-04 11:55:51,249 | INFO     | ..............................
[2025-06-04 13:56:55] 2025-06-04 11:55:51,395 | INFO     | 
[2025-06-04 13:56:55] 2025-06-04 11:55:51,396 | INFO     | job summary report
[2025-06-04 13:56:55] 2025-06-04 11:55:51,396 | INFO     | --------------------------------------------------
[2025-06-04 13:56:55] 2025-06-04 11:55:51,396 | INFO     | PanDA job id: 6677976685
[2025-06-04 13:56:55] 2025-06-04 11:55:51,396 | INFO     | task id: 45006595
[2025-06-04 13:56:55] 2025-06-04 11:55:51,396 | INFO     | errors: (none)
[2025-06-04 13:56:55] 2025-06-04 11:55:51,396 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:56:55] 2025-06-04 11:55:51,396 | INFO     | pilot state: finished 
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | transexitcode: 0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | exeerrorcode: 0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | exeerrordiag: 
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | exitcode: 0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | exitmsg: OK
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | cpuconsumptiontime: 50754 s
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | nevents: 400
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | neventsw: 0
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | pid: 17049
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | pgrp: 17049
[2025-06-04 13:56:55] 2025-06-04 11:55:51,397 | INFO     | corecount: 8
[2025-06-04 13:56:55] 2025-06-04 11:55:51,398 | INFO     | event service: False
[2025-06-04 13:56:55] 2025-06-04 11:55:51,398 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 66: 2405508, 77: 2405536, 80: 2405798, 87: 2405826, 14357: 2435973
[2025-06-04 13:56:55] 2025-06-04 11:55:51,398 | INFO     | --------------------------------------------------
[2025-06-04 13:56:55] 2025-06-04 11:55:51,398 | INFO     | 
[2025-06-04 13:56:55] 2025-06-04 11:55:51,398 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 13:56:55] 2025-06-04 11:55:51,523 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,523 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,524 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,525 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:56:55] 2025-06-04 11:55:51,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,525 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:56:55] 2025-06-04 11:55:51,526 | INFO     | job 6677976685 has completed (purged errors)
[2025-06-04 13:56:55] 2025-06-04 11:55:51,526 | INFO     | overall cleanup function is called
[2025-06-04 13:56:55] 2025-06-04 11:55:52,535 | INFO     | --- collectZombieJob: --- 10, [17049]
[2025-06-04 13:56:55] 2025-06-04 11:55:52,536 | INFO     | zombie collector waiting for pid 17049
[2025-06-04 13:56:55] 2025-06-04 11:55:52,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:56:55] 2025-06-04 11:55:52,536 | INFO     | collected zombie processes
[2025-06-04 13:56:55] 2025-06-04 11:55:52,536 | INFO     | will attempt to kill all subprocesses of pid=17049
[2025-06-04 13:56:55] 2025-06-04 11:55:52,654 | INFO     | process IDs to be killed: [17049] (in reverse order)
[2025-06-04 13:56:55] 2025-06-04 11:55:53,616 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:56:55] 2025-06-04 11:55:53,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:56:55] 2025-06-04 11:55:53,619 | INFO     | did not find any defunct processes belonging to 17049
[2025-06-04 13:56:55] 2025-06-04 11:55:53,622 | INFO     | did not find any defunct processes belonging to 17049
[2025-06-04 13:56:55] 2025-06-04 11:55:53,623 | INFO     | ready for new job
[2025-06-04 13:56:55] 2025-06-04 11:55:53,623 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:56:55] 2025-06-04 11:55:53,625 | INFO     | **************************************
[2025-06-04 13:56:55] 2025-06-04 11:55:53,625 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:56:55] 2025-06-04 11:55:53,625 | INFO     | **************************************
[2025-06-04 13:56:55] 2025-06-04 11:55:53,625 | INFO     | 
[2025-06-04 13:56:55] 2025-06-04 11:55:53,626 | INFO     | pilot is running in a VM
[2025-06-04 13:56:55] 2025-06-04 11:55:53,626 | INFO     | architecture information:
[2025-06-04 13:56:55] 2025-06-04 11:55:53,627 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:56:55] 2025-06-04 11:55:53,887 | INFO     | cat /etc/os-release:
[2025-06-04 13:56:55] NAME="CentOS Linux"
[2025-06-04 13:56:55] VERSION="7 (Core)"
[2025-06-04 13:56:55] ID="centos"
[2025-06-04 13:56:55] ID_LIKE="rhel fedora"
[2025-06-04 13:56:55] VERSION_ID="7"
[2025-06-04 13:56:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:56:55] ANSI_COLOR="0;31"
[2025-06-04 13:56:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:56:55] HOME_URL="https://www.centos.org/"
[2025-06-04 13:56:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:56:55] 
[2025-06-04 13:56:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:56:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:56:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:56:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:56:55] 
[2025-06-04 13:56:55] 2025-06-04 11:55:53,887 | INFO     | **************************************
[2025-06-04 13:56:55] 2025-06-04 11:55:54,391 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 13:56:55] 2025-06-04 11:55:54,686 | INFO     | sufficient remaining disk space (496551067648 B)
[2025-06-04 13:56:55] 2025-06-04 11:55:54,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:56:55] 2025-06-04 11:55:54,687 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:56:55] 2025-06-04 11:55:54,687 | INFO     | update_server=False
[2025-06-04 13:56:55] 2025-06-04 11:55:54,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:56:55] 2025-06-04 11:55:54,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:56:55] 2025-06-04 11:55:54,694 | INFO     | aborting loop
[2025-06-04 13:56:55] 2025-06-04 11:55:54,700 | INFO     | all payload control threads have been joined
[2025-06-04 13:56:55] 2025-06-04 11:55:54,797 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:56:55] 2025-06-04 11:55:54,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:56:55] 2025-06-04 11:55:54,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:56:55] 2025-06-04 11:55:55,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:56:55] 2025-06-04 11:55:55,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:56:55] 2025-06-04 11:55:55,511 | INFO     | all data control threads have been joined
[2025-06-04 13:56:55] 2025-06-04 11:55:55,691 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:55,700 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:55,706 | INFO     | [payload] control thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:55,802 | INFO     | all job control threads have been joined
[2025-06-04 13:56:55] 2025-06-04 11:55:56,380 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:56,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:56:55] 2025-06-04 11:55:56,517 | INFO     | [data] control thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:56,561 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:56,644 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:56,662 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:56,808 | INFO     | [job] control thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:56,856 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:56,999 | INFO     | [job] validate thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:57,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:57,122 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:57,142 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:57,420 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:59,049 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:56:55] 2025-06-04 11:55:59,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648026765120)>', '<ExcThread(monitor, started 140647159822080)>']
[2025-06-04 13:56:55] 2025-06-04 11:56:00,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:56:55] 2025-06-04 11:56:00,833 | INFO     | [monitor] control thread has ended
[2025-06-04 13:56:55] 2025-06-04 11:56:04,858 | INFO     | all workflow threads have been joined
[2025-06-04 13:56:55] 2025-06-04 11:56:04,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:56:55] 2025-06-04 11:56:04,859 | INFO     | traces error code: 0
[2025-06-04 13:56:55] 2025-06-04 11:56:04,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:56:55] 2025-06-04 11:56:05,289 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:56:55] 2025-06-04 11:56:05,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:56:55] 2025-06-04 11:56:05,420 [wrapper] pilotpid: 5751
[2025-06-04 13:56:55] 2025-06-04 11:56:05,532 [wrapper] Pilot exit status: 0
[2025-06-04 13:56:55] 2025-06-04 11:56:05,911 [wrapper] pandaids: 6677976685
[2025-06-04 13:56:55] 2025-06-04 11:56:06,550 [wrapper] cleanup supervisor_pilot  2123 5752
[2025-06-04 13:56:55] 2025-06-04 11:56:06,667 [wrapper] Test setup, not cleaning
[2025-06-04 13:56:55] 2025-06-04 11:56:06,771 [wrapper] apfmon messages muted
[2025-06-04 13:56:55] 2025-06-04 11:56:06,811 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:56:55] 2025-06-04 11:56:06,867 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:56:55]  *** Error codes and diagnostics ***
[2025-06-04 13:56:55]     "exeErrorCode": 0,
[2025-06-04 13:56:55]     "exeErrorDiag": "",
[2025-06-04 13:56:55]     "pilotErrorCode": 0,
[2025-06-04 13:56:55]     "pilotErrorDiag": "",
[2025-06-04 13:56:55]  *** Listing of results directory ***
[2025-06-04 13:56:55] total 393500
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 13:56:55] -rwx------. 1 boinc boinc     37140 Jun  3 21:08 runpilot2-wrapper.sh
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:08 queuedata.json
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc       100 Jun  4 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:56:55] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 09:48 run_atlas
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc       105 Jun  4 09:48 job.xml
[2025-06-04 13:56:55] -rw-r--r--. 2 boinc boinc 214334940 Jun  4 09:48 EVNT.45006593._001740.pool.root.1
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc      6390 Jun  4 09:48 init_data.xml
[2025-06-04 13:56:55] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:48 start_atlas.sh
[2025-06-04 13:56:55] drwxrwx--x. 2 boinc boinc        68 Jun  4 09:48 shared
[2025-06-04 13:56:55] -rw-r--r--. 2 boinc boinc    508881 Jun  4 09:48 input.tar.gz
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc         0 Jun  4 09:48 boinc_lockfile
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc      2525 Jun  4 09:49 pandaJob.out
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc    986745 Jun  4 09:52 agis_schedconf.cvmfs.json
[2025-06-04 13:56:55] drwx------. 4 boinc boinc      4096 Jun  4 09:52 pilot3
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc 181514055 Jun  4 13:53 HITS.45006595._043411.pool.root.1
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc       531 Jun  4 13:53 boinc_task_state.xml
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc      1014 Jun  4 13:54 memory_monitor_summary.json
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc   1598969 Jun  4 13:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc    391512 Jun  4 13:54 log.45006595._043411.job.log.tgz.1
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc        95 Jun  4 13:55 pilot_heartbeat.json
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc      7689 Jun  4 13:55 heartbeat.json
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc      4416 Jun  4 13:56 pilotlog.txt
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc   1247549 Jun  4 13:56 log.45006595._043411.job.log.1
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc       357 Jun  4 13:56 output.list
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:56 runtime_log
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc   1658880 Jun  4 13:56 result.tar.gz
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc       656 Jun  4 13:56 CKmKDmVBmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyfZKDmt1afMo.diag
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc      8659 Jun  4 13:56 runtime_log.err
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc      8192 Jun  4 13:56 boinc_mmap_file
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc        28 Jun  4 13:56 wrapper_checkpoint.txt
[2025-06-04 13:56:55] -rw-r--r--. 1 boinc boinc     20510 Jun  4 13:56 stderr.txt
[2025-06-04 13:56:55] HITS file was successfully produced:
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc 181514055 Jun  4 13:53 shared/HITS.pool.root.1
[2025-06-04 13:56:55]  *** Contents of shared directory: ***
[2025-06-04 13:56:55] total 388708
[2025-06-04 13:56:55] -rw-r--r--. 2 boinc boinc 214334940 Jun  4 09:48 ATLAS.root_0
[2025-06-04 13:56:55] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:48 start_atlas.sh
[2025-06-04 13:56:55] -rw-r--r--. 2 boinc boinc    508881 Jun  4 09:48 input.tar.gz
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc 181514055 Jun  4 13:53 HITS.pool.root.1
[2025-06-04 13:56:55] -rw-------. 1 boinc boinc   1658880 Jun  4 13:56 result.tar.gz
13:56:57 (1087): run_atlas exited; CPU time 50952.555243
13:56:57 (1087): called boinc_finish(0)

</stderr_txt>
]]>

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