Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:58:16 (1738407): wrapper (7.7.26015): starting
18:58:16 (1738407): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 18:58:17] Arguments: --nthreads 10
[2025-06-03 18:58:17] Threads: 10
[2025-06-03 18:58:17] Checking for CVMFS
[2025-06-03 18:58:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:58:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:58:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:58:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:58:17] 2.12.6.0 9586 527 117344 146760 2 746 16911417 32935936 11847 16776704 0 2798476 99.813 1014477 30265 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 18:58:17] CVMFS is ok
[2025-06-03 18:58:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:58:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:58:17] Further information can be found at the LHC@home message board.
[2025-06-03 18:58:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:58:17] Checking for apptainer binary...
[2025-06-03 18:58:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:58:17] Running /usr/bin/apptainer --version
[2025-06-03 18:58:17] apptainer version 1.4.1-1.el9
[2025-06-03 18:58:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:58:17] c-8-36.aglt2.org
[2025-06-03 18:58:17] apptainer works
[2025-06-03 18:58:17] Set ATHENA_PROC_NUMBER=10
[2025-06-03 18:58:17] Set ATHENA_CORE_NUMBER=10
[2025-06-03 18:58:17] Starting ATLAS job with PandaID=6677976707
[2025-06-03 18:58:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:26:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:26:46]  guid=f613254e-35af-4eb1-842e-78010e9ee5ef
[2025-06-03 20:26:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 20:26:46]  is_altstaged=None
[2025-06-03 20:26:46]  is_tar=False
[2025-06-03 20:26:46]  lfn=log.45006595._043433.job.log.tgz.1
[2025-06-03 20:26:46]  mtime=0
[2025-06-03 20:26:46]  protocol_id=None
[2025-06-03 20:26:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 20:26:46]  replicas=None
[2025-06-03 20:26:46]  scope=mc23_13p6TeV
[2025-06-03 20:26:46]  status=None
[2025-06-03 20:26:46]  status_code=0
[2025-06-03 20:26:46]  storage_token=
[2025-06-03 20:26:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677976707/log.45006595._043433.job.log.tgz.1
[2025-06-03 20:26:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/70/log.45006595._043433.job.log.tgz.1
[2025-06-03 20:26:46]  workdir=None
[2025-06-03 20:26:46] ]
[2025-06-03 20:26:46] 2025-06-04 00:26:22,258 | INFO     | transferring file log.45006595._043433.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677976707/log.45006595._043433.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 20:26:46] 2025-06-04 00:26:22,258 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677976707/log.45006595._043433.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._043433.job
[2025-06-03 20:26:46] 2025-06-04 00:26:22,277 | INFO     | adding to output.list: log.45006595._043433.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/70/log.45006595._043433.job.log.tg
[2025-06-03 20:26:46] 2025-06-04 00:26:22,278 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 20:26:46] 2025-06-04 00:26:22,278 | INFO     | summary of transferred files:
[2025-06-03 20:26:46] 2025-06-04 00:26:22,278 | INFO     |  -- lfn=log.45006595._043433.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 20:26:46] 2025-06-04 00:26:22,278 | INFO     | stage-out finished correctly
[2025-06-03 20:26:46] 2025-06-04 00:26:22,720 | WARNING  | process 1757318 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 20:26:46] 2025-06-04 00:26:22,721 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976707/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:26:46] 2025-06-04 00:26:22,748 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 20:26:46] 2025-06-04 00:26:22,983 | INFO     | job 6677976707 has state=finished
[2025-06-03 20:26:46] 2025-06-04 00:26:22,983 | INFO     | preparing for final server update for job 6677976707 in state='finished'
[2025-06-03 20:26:46] 2025-06-04 00:26:22,984 | INFO     | this job has now completed (state=finished)
[2025-06-03 20:26:46] 2025-06-04 00:26:22,984 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 20:26:46] 2025-06-04 00:26:22,984 | INFO     | log transfer has been attempted: DONE
[2025-06-03 20:26:46] 2025-06-04 00:26:22,984 | INFO     | job 6677976707 has finished - writing final server update
[2025-06-03 20:26:46] 2025-06-04 00:26:22,985 | INFO     | total number of processed events: 400 (read)
[2025-06-03 20:26:46] 2025-06-04 00:26:23,000 | INFO     | executing command: lscpu
[2025-06-03 20:26:46] 2025-06-04 00:26:23,060 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 20:26:46] 2025-06-04 00:26:23,162 | INFO     | number of running child processes to parent process 1757318: 1
[2025-06-03 20:26:46] 2025-06-04 00:26:23,162 | INFO     | maximum number of monitored processes: 6
[2025-06-03 20:26:46] 2025-06-04 00:26:25,665 | INFO     | monitor loop #376: job 0:6677976707 is in state 'finished'
[2025-06-03 20:26:46] 2025-06-04 00:26:25,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:26:46] 2025-06-04 00:26:27,054 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 20:26:46] 2025-06-04 00:26:27,054 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976707/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:26:46] 2025-06-04 00:26:27,055 | INFO     | extracted standard info from prmon json
[2025-06-03 20:26:46] 2025-06-04 00:26:27,055 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:26:46] 2025-06-04 00:26:27,055 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:26:46] 2025-06-04 00:26:27,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:26:46] 2025-06-04 00:26:27,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:26:46] 2025-06-04 00:26:27,058 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:26:46] 2025-06-04 00:26:27,058 | INFO     | sum of square deviations: 152856118.98734194
[2025-06-03 20:26:46] 2025-06-04 00:26:27,059 | INFO     | sum of deviations: 5824873433.797468
[2025-06-03 20:26:46] 2025-06-04 00:26:27,059 | INFO     | mean x: 1748994217.012658
[2025-06-03 20:26:46] 2025-06-04 00:26:27,059 | INFO     | mean y: 2266727.2025316455
[2025-06-03 20:26:46] 2025-06-04 00:26:27,059 | INFO     | -- intersect: -66646487788.05558
[2025-06-03 20:26:46] 2025-06-04 00:26:27,059 | INFO     | intersect: -66646487788.05558
[2025-06-03 20:26:46] 2025-06-04 00:26:27,060 | INFO     | chi2: 0.7717291064293987
[2025-06-03 20:26:46] 2025-06-04 00:26:27,060 | INFO     | -- intersect: -66646487788.05558
[2025-06-03 20:26:46] 2025-06-04 00:26:27,060 | INFO     | current memory leak: 38.11 B/s (using 79 data points, chi2=0.77)
[2025-06-03 20:26:46] 2025-06-04 00:26:27,060 | INFO     | ..............................
[2025-06-03 20:26:46] 2025-06-04 00:26:27,060 | INFO     | . Timing measurements:
[2025-06-03 20:26:46] 2025-06-04 00:26:27,061 | INFO     | . get job = 0 s
[2025-06-03 20:26:46] 2025-06-04 00:26:27,061 | INFO     | . initial setup = 2 s
[2025-06-03 20:26:46] 2025-06-04 00:26:27,061 | INFO     | . payload setup = 6 s
[2025-06-03 20:26:46] 2025-06-04 00:26:27,061 | INFO     | . stage-in = 0 s
[2025-06-03 20:26:46] 2025-06-04 00:26:27,061 | INFO     | . payload execution = 5248 s
[2025-06-03 20:26:46] 2025-06-04 00:26:27,061 | INFO     | . stage-out = 0 s
[2025-06-03 20:26:46] 2025-06-04 00:26:27,061 | INFO     | . log creation = 0 s
[2025-06-03 20:26:46] 2025-06-04 00:26:27,061 | INFO     | ..............................
[2025-06-03 20:26:46] 2025-06-04 00:26:27,479 | INFO     | 
[2025-06-03 20:26:46] 2025-06-04 00:26:27,479 | INFO     | job summary report
[2025-06-03 20:26:46] 2025-06-04 00:26:27,479 | INFO     | --------------------------------------------------
[2025-06-03 20:26:46] 2025-06-04 00:26:27,479 | INFO     | PanDA job id: 6677976707
[2025-06-03 20:26:46] 2025-06-04 00:26:27,479 | INFO     | task id: 45006595
[2025-06-03 20:26:46] 2025-06-04 00:26:27,479 | INFO     | errors: (none)
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | pilot state: finished 
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | transexitcode: 0
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | exeerrorcode: 0
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | exeerrordiag: 
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | exitcode: 0
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | exitmsg: OK
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | cpuconsumptiontime: 39784 s
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | nevents: 400
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | neventsw: 0
[2025-06-03 20:26:46] 2025-06-04 00:26:27,480 | INFO     | pid: 1757318
[2025-06-03 20:26:46] 2025-06-04 00:26:27,481 | INFO     | pgrp: 1757318
[2025-06-03 20:26:46] 2025-06-04 00:26:27,481 | INFO     | corecount: 10
[2025-06-03 20:26:46] 2025-06-04 00:26:27,481 | INFO     | event service: False
[2025-06-03 20:26:46] 2025-06-04 00:26:27,481 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 5259: 2431757, 5260: 2440698, 5261: 2440754, 5265: 2441052}
[2025-06-03 20:26:46] 2025-06-04 00:26:27,481 | INFO     | --------------------------------------------------
[2025-06-03 20:26:46] 2025-06-04 00:26:27,481 | INFO     | 
[2025-06-03 20:26:46] 2025-06-04 00:26:27,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 20:26:46] 2025-06-04 00:26:27,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:26:46] 2025-06-04 00:26:27,505 | INFO     | job 6677976707 has completed (purged errors)
[2025-06-03 20:26:46] 2025-06-04 00:26:27,505 | INFO     | overall cleanup function is called
[2025-06-03 20:26:46] 2025-06-04 00:26:28,513 | INFO     | --- collectZombieJob: --- 10, [1757318]
[2025-06-03 20:26:46] 2025-06-04 00:26:28,513 | INFO     | zombie collector waiting for pid 1757318
[2025-06-03 20:26:46] 2025-06-04 00:26:28,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:26:46] 2025-06-04 00:26:28,513 | INFO     | collected zombie processes
[2025-06-03 20:26:46] 2025-06-04 00:26:28,513 | INFO     | will attempt to kill all subprocesses of pid=1757318
[2025-06-03 20:26:46] 2025-06-04 00:26:28,811 | INFO     | process IDs to be killed: [1757318] (in reverse order)
[2025-06-03 20:26:46] 2025-06-04 00:26:28,898 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:26:46] 2025-06-04 00:26:28,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:26:46] 2025-06-04 00:26:28,910 | INFO     | did not find any defunct processes belonging to 1757318
[2025-06-03 20:26:46] 2025-06-04 00:26:28,922 | INFO     | did not find any defunct processes belonging to 1757318
[2025-06-03 20:26:46] 2025-06-04 00:26:28,922 | INFO     | ready for new job
[2025-06-03 20:26:46] 2025-06-04 00:26:28,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:26:46] 2025-06-04 00:26:28,924 | INFO     | **************************************
[2025-06-03 20:26:46] 2025-06-04 00:26:28,924 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:26:46] 2025-06-04 00:26:28,924 | INFO     | **************************************
[2025-06-03 20:26:46] 2025-06-04 00:26:28,924 | INFO     | 
[2025-06-03 20:26:46] 2025-06-04 00:26:28,938 | INFO     | architecture information:
[2025-06-03 20:26:46] 2025-06-04 00:26:28,939 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:26:46] 2025-06-04 00:26:28,956 | INFO     | cat /etc/os-release:
[2025-06-03 20:26:46] NAME="CentOS Linux"
[2025-06-03 20:26:46] VERSION="7 (Core)"
[2025-06-03 20:26:46] ID="centos"
[2025-06-03 20:26:46] ID_LIKE="rhel fedora"
[2025-06-03 20:26:46] VERSION_ID="7"
[2025-06-03 20:26:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:26:46] ANSI_COLOR="0;31"
[2025-06-03 20:26:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:26:46] HOME_URL="https://www.centos.org/"
[2025-06-03 20:26:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:26:46] 
[2025-06-03 20:26:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:26:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:26:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:26:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:26:46] 
[2025-06-03 20:26:46] 2025-06-04 00:26:28,957 | INFO     | **************************************
[2025-06-03 20:26:46] 2025-06-04 00:26:29,460 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 20:26:46] 2025-06-04 00:26:29,478 | INFO     | sufficient remaining disk space (76586942464 B)
[2025-06-03 20:26:46] 2025-06-04 00:26:29,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:26:46] 2025-06-04 00:26:29,479 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:26:46] 2025-06-04 00:26:29,479 | INFO     | update_server=False
[2025-06-03 20:26:46] 2025-06-04 00:26:29,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:26:46] 2025-06-04 00:26:29,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:26:46] 2025-06-04 00:26:29,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:26:46] 2025-06-04 00:26:29,480 | INFO     | aborting loop
[2025-06-03 20:26:46] 2025-06-04 00:26:29,525 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:26:46] 2025-06-04 00:26:29,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:26:46] 2025-06-04 00:26:29,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:26:46] 2025-06-04 00:26:30,129 | INFO     | all job control threads have been joined
[2025-06-03 20:26:46] 2025-06-04 00:26:30,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:26:46] 2025-06-04 00:26:30,414 | INFO     | all data control threads have been joined
[2025-06-03 20:26:46] 2025-06-04 00:26:30,484 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:30,486 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:30,524 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:30,591 | INFO     | [job] validate thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:30,614 | INFO     | all payload control threads have been joined
[2025-06-03 20:26:46] 2025-06-04 00:26:30,840 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:30,949 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:30,951 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:31,134 | INFO     | [job] control thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:31,419 | INFO     | [data] control thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:31,451 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:31,620 | INFO     | [payload] control thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:32,058 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:32,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:26:46] 2025-06-04 00:26:32,401 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:33,184 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:33,487 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:39,854 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:26:46] 2025-06-04 00:26:40,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:26:46] 2025-06-04 00:26:41,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143900211008)>', '<ExcThread(monitor, started 140143390332672)>']
[2025-06-03 20:26:46] 2025-06-04 00:26:42,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:26:46] 2025-06-04 00:26:42,586 | INFO     | [monitor] control thread has ended
[2025-06-03 20:26:46] 2025-06-04 00:26:46,607 | INFO     | all workflow threads have been joined
[2025-06-03 20:26:46] 2025-06-04 00:26:46,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:26:46] 2025-06-04 00:26:46,607 | INFO     | traces error code: 0
[2025-06-03 20:26:46] 2025-06-04 00:26:46,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:26:46] 2025-06-04 00:26:46,754 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:26:46] 2025-06-04 00:26:46,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:26:46] 2025-06-04 00:26:46,760 [wrapper] pilotpid: 1741988
[2025-06-03 20:26:46] 2025-06-04 00:26:46,762 [wrapper] Pilot exit status: 0
[2025-06-03 20:26:46] 2025-06-04 00:26:46,774 [wrapper] pandaids: 6677976707
[2025-06-03 20:26:46] 2025-06-04 00:26:46,832 [wrapper] cleanup supervisor_pilot 2087770 1741989
[2025-06-03 20:26:46] 2025-06-04 00:26:46,835 [wrapper] Test setup, not cleaning
[2025-06-03 20:26:46] 2025-06-04 00:26:46,838 [wrapper] apfmon messages muted
[2025-06-03 20:26:46] 2025-06-04 00:26:46,840 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:26:46] 2025-06-04 00:26:46,843 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:26:46]  *** Error codes and diagnostics ***
[2025-06-03 20:26:46]     "exeErrorCode": 0,
[2025-06-03 20:26:46]     "exeErrorDiag": "",
[2025-06-03 20:26:46]     "pilotErrorCode": 0,
[2025-06-03 20:26:46]     "pilotErrorDiag": "",
[2025-06-03 20:26:46]  *** Listing of results directory ***
[2025-06-03 20:26:46] total 390036
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 20:26:46] -rwx------. 1 boincer umatlas     37140 Jun  3 15:11 runpilot2-wrapper.sh
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:11 queuedata.json
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas       100 Jun  3 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:26:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 18:58 run_atlas
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas       105 Jun  3 18:58 job.xml
[2025-06-03 20:26:46] -rw-r--r--. 2 boincer umatlas 215958859 Jun  3 18:58 EVNT.45006593._001741.pool.root.1
[2025-06-03 20:26:46] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 18:58 input.tar.gz
[2025-06-03 20:26:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:58 start_atlas.sh
[2025-06-03 20:26:46] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 18:58 shared
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas         0 Jun  3 18:58 boinc_lockfile
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 18:58 pandaJob.out
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas    986861 Jun  3 18:58 agis_schedconf.cvmfs.json
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas   1603667 Jun  3 18:58 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:26:46] drwx------. 4 boincer umatlas      4096 Jun  3 18:58 pilot3
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas      6658 Jun  3 20:21 init_data.xml
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas 177921380 Jun  3 20:25 HITS.45006595._043433.pool.root.1
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas        95 Jun  3 20:25 pilot_heartbeat.json
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas       530 Jun  3 20:25 boinc_task_state.xml
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas      1037 Jun  3 20:26 memory_monitor_summary.json
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas    338425 Jun  3 20:26 log.45006595._043433.job.log.tgz.1
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas      7710 Jun  3 20:26 heartbeat.json
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 20:26 boinc_mmap_file
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas        27 Jun  3 20:26 wrapper_checkpoint.txt
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas      4425 Jun  3 20:26 pilotlog.txt
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas    504352 Jun  3 20:26 log.45006595._043433.job.log.1
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas       357 Jun  3 20:26 output.list
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas       620 Jun  3 20:26 runtime_log
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas    860160 Jun  3 20:26 result.tar.gz
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas      8651 Jun  3 20:26 runtime_log.err
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas       651 Jun  3 20:26 gWrMDmQEmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUrlKDm4ipUDm.diag
[2025-06-03 20:26:46] -rw-r--r--. 1 boincer umatlas     21301 Jun  3 20:26 stderr.txt
[2025-06-03 20:26:46] HITS file was successfully produced:
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas 177921380 Jun  3 20:25 shared/HITS.pool.root.1
[2025-06-03 20:26:46]  *** Contents of shared directory: ***
[2025-06-03 20:26:46] total 386012
[2025-06-03 20:26:46] -rw-r--r--. 2 boincer umatlas 215958859 Jun  3 18:58 ATLAS.root_0
[2025-06-03 20:26:46] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 18:58 input.tar.gz
[2025-06-03 20:26:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:58 start_atlas.sh
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas 177921380 Jun  3 20:25 HITS.pool.root.1
[2025-06-03 20:26:46] -rw-------. 1 boincer umatlas    860160 Jun  3 20:26 result.tar.gz
20:26:48 (1738407): run_atlas exited; CPU time 39936.355550
20:26:48 (1738407): called boinc_finish(0)

</stderr_txt>
]]>

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