Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:05:26 (3375490): wrapper (7.7.26015): starting
16:05:26 (3375490): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 16:05:26] Arguments: --nthreads 12
[2025-06-03 16:05:26] Threads: 12
[2025-06-03 16:05:26] Checking for CVMFS
[2025-06-03 16:05:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:05:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:05:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:05:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:05:26] 2.11.5.0 1901393 32263 249340 146760 3 455 38210491 45568000 13942 130560 0 272029221 99.813 158974649 25718 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 16:05:26] CVMFS is ok
[2025-06-03 16:05:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:05:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:05:26] Further information can be found at the LHC@home message board.
[2025-06-03 16:05:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:05:26] Checking for apptainer binary...
[2025-06-03 16:05:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:05:26] Running /usr/bin/apptainer --version
[2025-06-03 16:05:26] apptainer version 1.4.0-1.el9
[2025-06-03 16:05:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:05:27] wns0102.triumf.lcg
[2025-06-03 16:05:27] apptainer works
[2025-06-03 16:05:27] Set ATHENA_PROC_NUMBER=12
[2025-06-03 16:05:27] Set ATHENA_CORE_NUMBER=12
[2025-06-03 16:05:27] Starting ATLAS job with PandaID=6678074317
[2025-06-03 16:05:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:10:02]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:10:03] 2025-06-03 23:09:44,252 | INFO     | extracted standard info from prmon json
[2025-06-03 16:10:03] 2025-06-03 23:09:44,252 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:10:03] 2025-06-03 23:09:44,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:10:03] 2025-06-03 23:09:44,253 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:10:03] 2025-06-03 23:09:44,253 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:10:03] 2025-06-03 23:09:44,253 | WARNING  | wrong length of table data, x=[1748992028.0], y=[1656.0] (must be same and length>=4)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | ..............................
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . Timing measurements:
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . get job = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . initial setup = 4 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . payload setup = 25 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . stage-in = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . payload execution = 36 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . stage-out = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . log creation = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | ..............................
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 16:10:03] 2025-06-03 23:09:44,255 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678074317/pilotlog.txt
[2025-06-03 16:10:03] 2025-06-03 23:09:44,267 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 16:10:03] - Log from pilotlog.txt -
[2025-06-03 16:10:03] 2025-06-03 23:09:44,251 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 16:10:03] 2025-06-03 23:09:44,251 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678074317/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,252 | INFO     | extracted standard info from prmon json
[2025-06-03 16:10:03] 2025-06-03 23:09:44,252 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:10:03] 2025-06-03 23:09:44,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:10:03] 2025-06-03 23:09:44,253 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:10:03] 2025-06-03 23:09:44,253 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:10:03] 2025-06-03 23:09:44,253 | WARNING  | wrong length of table data, x=[1748992028.0], y=[1656.0] (must be same and length>=4)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | ..............................
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . Timing measurements:
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . get job = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . initial setup = 4 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . payload setup = 25 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . stage-in = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . payload execution = 36 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . stage-out = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . log creation = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | ..............................
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 16:10:03] 2025-06-03 23:09:44,255 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678074317/pilotlog.txt
[2025-06-03 16:10:03] 2025-06-03 23:09:44,267 | WARNING  | 
[2025-06-03 16:10:03] [begin log extracts]
[2025-06-03 16:10:03] - Log from pilotlog.txt -
[2025-06-03 16:10:03] 2025-06-03 23:09:44,251 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 16:10:03] 2025-06-03 23:09:44,251 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678074317/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,252 | INFO     | extracted standard info from prmon json
[2025-06-03 16:10:03] 2025-06-03 23:09:44,252 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:10:03] 2025-06-03 23:09:44,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:10:03] 2025-06-03 23:09:44,253 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:10:03] 2025-06-03 23:09:44,253 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:10:03] 2025-06-03 23:09:44,253 | WARNING  | wrong length of table data, x=[1748992028.0], y=[1656.0] (must be same and length>=4)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | ..............................
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . Timing measurements:
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . get job = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . initial setup = 4 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . payload setup = 25 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . stage-in = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . payload execution = 36 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . stage-out = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | . log creation = 0 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | ..............................
[2025-06-03 16:10:03] 2025-06-03 23:09:44,254 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 16:10:03] 2025-06-03 23:09:44,255 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678074317/pilotlog.txt
[2025-06-03 16:10:03] [end log extracts]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,267 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,269 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 16:10:03] 2025-06-03 23:09:44,385 | INFO     | 
[2025-06-03 16:10:03] 2025-06-03 23:09:44,385 | INFO     | job summary report
[2025-06-03 16:10:03] 2025-06-03 23:09:44,385 | INFO     | --------------------------------------------------
[2025-06-03 16:10:03] 2025-06-03 23:09:44,385 | INFO     | PanDA job id: 6678074317
[2025-06-03 16:10:03] 2025-06-03 23:09:44,385 | INFO     | task id: 45006595
[2025-06-03 16:10:03] 2025-06-03 23:09:44,385 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 16:07:18,285 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | pilot state: failed 
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | transexitcode: 65
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | exeerrorcode: 65
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | exitcode: 65
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | cpuconsumptiontime: 20 s
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | nevents: 0
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | neventsw: 0
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | pid: 3385400
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | pgrp: 3385400
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | corecount: 12
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | event service: False
[2025-06-03 16:10:03] 2025-06-03 23:09:44,386 | INFO     | sizes: {0: 2405181, 1: 2405181, 7: 2405415, 11: 2405443, 65: 2428624, 66: 2432859, 68: 2433015, 204: 2433157}
[2025-06-03 16:10:03] 2025-06-03 23:09:44,387 | INFO     | --------------------------------------------------
[2025-06-03 16:10:03] 2025-06-03 23:09:44,387 | INFO     | 
[2025-06-03 16:10:03] 2025-06-03 23:09:44,387 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 16:10:03] 2025-06-03 23:09:44,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:10:03] 2025-06-03 23:09:44,417 | INFO     | job 6678074317 has completed (purged errors)
[2025-06-03 16:10:03] 2025-06-03 23:09:44,418 | INFO     | overall cleanup function is called
[2025-06-03 16:10:03] 2025-06-03 23:09:45,430 | INFO     | --- collectZombieJob: --- 10, [3385400]
[2025-06-03 16:10:03] 2025-06-03 23:09:45,430 | INFO     | zombie collector waiting for pid 3385400
[2025-06-03 16:10:03] 2025-06-03 23:09:45,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:10:03] 2025-06-03 23:09:45,430 | INFO     | collected zombie processes
[2025-06-03 16:10:03] 2025-06-03 23:09:45,430 | INFO     | will attempt to kill all subprocesses of pid=3385400
[2025-06-03 16:10:03] 2025-06-03 23:09:46,450 | INFO     | process IDs to be killed: [3385400] (in reverse order)
[2025-06-03 16:10:03] 2025-06-03 23:09:46,842 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:10:03] 2025-06-03 23:09:46,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:10:03] 2025-06-03 23:09:46,858 | INFO     | did not find any defunct processes belonging to 3385400
[2025-06-03 16:10:03] 2025-06-03 23:09:46,867 | INFO     | did not find any defunct processes belonging to 3385400
[2025-06-03 16:10:03] 2025-06-03 23:09:46,868 | INFO     | ready for new job
[2025-06-03 16:10:03] 2025-06-03 23:09:46,868 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:10:03] 2025-06-03 23:09:46,871 | INFO     | **************************************
[2025-06-03 16:10:03] 2025-06-03 23:09:46,871 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:10:03] 2025-06-03 23:09:46,871 | INFO     | **************************************
[2025-06-03 16:10:03] 2025-06-03 23:09:46,871 | INFO     | 
[2025-06-03 16:10:03] 2025-06-03 23:09:46,873 | INFO     | architecture information:
[2025-06-03 16:10:03] 2025-06-03 23:09:46,874 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:10:03] 2025-06-03 23:09:46,895 | INFO     | cat /etc/os-release:
[2025-06-03 16:10:03] NAME="CentOS Linux"
[2025-06-03 16:10:03] VERSION="7 (Core)"
[2025-06-03 16:10:03] ID="centos"
[2025-06-03 16:10:03] ID_LIKE="rhel fedora"
[2025-06-03 16:10:03] VERSION_ID="7"
[2025-06-03 16:10:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:10:03] ANSI_COLOR="0;31"
[2025-06-03 16:10:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:10:03] HOME_URL="https://www.centos.org/"
[2025-06-03 16:10:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:10:03] 
[2025-06-03 16:10:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:10:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:10:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:10:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:10:03] 
[2025-06-03 16:10:03] 2025-06-03 23:09:46,896 | INFO     | **************************************
[2025-06-03 16:10:03] 2025-06-03 23:09:47,400 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 16:10:03] 2025-06-03 23:09:47,439 | INFO     | sufficient remaining disk space (2056688500736 B)
[2025-06-03 16:10:03] 2025-06-03 23:09:47,439 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:10:03] 2025-06-03 23:09:47,439 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:10:03] 2025-06-03 23:09:47,439 | INFO     | update_server=False
[2025-06-03 16:10:03] 2025-06-03 23:09:47,439 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:10:03] 2025-06-03 23:09:47,857 | INFO     | PID=3379059 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 16:10:03] 2025-06-03 23:09:47,857 | INFO     | .. there are 28 such processes running
[2025-06-03 16:10:03] 2025-06-03 23:09:47,857 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:10:03] 2025-06-03 23:09:47,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:10:03] 2025-06-03 23:09:47,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:10:03] 2025-06-03 23:09:48,030 | INFO     | all job control threads have been joined
[2025-06-03 16:10:03] 2025-06-03 23:09:48,135 | INFO     | all payload control threads have been joined
[2025-06-03 16:10:03] 2025-06-03 23:09:48,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:10:03] 2025-06-03 23:09:48,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:10:03] 2025-06-03 23:09:48,327 | INFO     | aborting loop
[2025-06-03 16:10:03] 2025-06-03 23:09:48,445 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:48,500 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:48,548 | INFO     | all data control threads have been joined
[2025-06-03 16:10:03] 2025-06-03 23:09:48,605 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:48,677 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:49,036 | INFO     | [job] control thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:49,107 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:49,141 | INFO     | [payload] control thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:49,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:49,333 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:49,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:10:03] 2025-06-03 23:09:49,461 | INFO     | [job] validate thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:49,554 | INFO     | [data] control thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:49,720 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:49,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:10:03] 2025-06-03 23:09:49,813 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:50,252 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:50,406 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:53,818 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:10:03] 2025-06-03 23:09:55,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838201616192)>', '<ExcThread(monitor, started 139837189371648)>']
[2025-06-03 16:10:03] 2025-06-03 23:09:55,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:10:03] 2025-06-03 23:09:55,905 | INFO     | [monitor] control thread has ended
[2025-06-03 16:10:03] 2025-06-03 23:10:00,542 | INFO     | all workflow threads have been joined
[2025-06-03 16:10:03] 2025-06-03 23:10:00,542 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:10:03] 2025-06-03 23:10:00,542 | INFO     | traces error code: 0
[2025-06-03 16:10:03] 2025-06-03 23:10:00,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:10:03] 2025-06-03 23:10:01,248 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:10:03] 2025-06-03 23:10:01,304 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:10:03] 2025-06-03 23:10:01,341 [wrapper] pilotpid: 3379059
[2025-06-03 16:10:03] 2025-06-03 23:10:01,432 [wrapper] Pilot exit status: 0
[2025-06-03 16:10:03] 2025-06-03 23:10:01,577 [wrapper] pandaids: 6678074317
[2025-06-03 16:10:03] 2025-06-03 23:10:02,020 [wrapper] cleanup supervisor_pilot 3379065 3379060
[2025-06-03 16:10:03] 2025-06-03 23:10:02,035 [wrapper] Test setup, not cleaning
[2025-06-03 16:10:03] 2025-06-03 23:10:02,075 [wrapper] apfmon messages muted
[2025-06-03 16:10:03] 2025-06-03 23:10:02,105 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:10:03] 2025-06-03 23:10:02,118 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:10:03]  *** Error codes and diagnostics ***
[2025-06-03 16:10:03]     "exeErrorCode": 65,
[2025-06-03 16:10:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 16:10:03]     "pilotErrorCode": 1305,
[2025-06-03 16:10:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 16:10:03]  *** Listing of results directory ***
[2025-06-03 16:10:03] total 215248
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc    495897 Jun  3 13:49 pilot3.tar.gz
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:04 queuedata.json
[2025-06-03 16:10:03] -rwx------. 1 boinc boinc     37140 Jun  3 14:06 runpilot2-wrapper.sh
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:10:03] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:05 run_atlas
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:05 job.xml
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc      6596 Jun  3 16:05 init_data.xml
[2025-06-03 16:10:03] -rw-r--r--. 2 boinc boinc 216372102 Jun  3 16:05 EVNT.45006593._001838.pool.root.1
[2025-06-03 16:10:03] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:05 start_atlas.sh
[2025-06-03 16:10:03] drwxrwx--x. 2 boinc boinc      4096 Jun  3 16:05 shared
[2025-06-03 16:10:03] -rw-r--r--. 2 boinc boinc    508889 Jun  3 16:05 input.tar.gz
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:05 boinc_lockfile
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc      2525 Jun  3 16:05 pandaJob.out
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc    986861 Jun  3 16:05 agis_schedconf.cvmfs.json
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc   1603667 Jun  3 16:05 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:10:03] drwx------. 4 boinc boinc      4096 Jun  3 16:06 pilot3
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc       524 Jun  3 16:07 boinc_task_state.xml
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc       962 Jun  3 16:07 memory_monitor_summary.json
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc     21059 Jun  3 16:07 log.45006595._045830.job.log.tgz.1
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc        95 Jun  3 16:08 pilot_heartbeat.json
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc      8324 Jun  3 16:09 heartbeat.json
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc        22 Jun  3 16:09 wrapper_checkpoint.txt
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc      4747 Jun  3 16:10 pilotlog.txt
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc     78550 Jun  3 16:10 log.45006595._045830.job.log.1
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc      8192 Jun  3 16:10 boinc_mmap_file
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc       188 Jun  3 16:10 output.list
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc       620 Jun  3 16:10 runtime_log
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc    122880 Jun  3 16:10 result.tar.gz
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc      8484 Jun  3 16:10 runtime_log.err
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc       646 Jun  3 16:10 Rs5MDmz0ng7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9xZKDm8dwbSm.diag
[2025-06-03 16:10:03] -rw-r--r--. 1 boinc boinc     21707 Jun  3 16:10 stderr.txt
[2025-06-03 16:10:03] No HITS result produced
[2025-06-03 16:10:03]  *** Contents of shared directory: ***
[2025-06-03 16:10:03] total 211944
[2025-06-03 16:10:03] -rw-r--r--. 2 boinc boinc 216372102 Jun  3 16:05 ATLAS.root_0
[2025-06-03 16:10:03] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:05 start_atlas.sh
[2025-06-03 16:10:03] -rw-r--r--. 2 boinc boinc    508889 Jun  3 16:05 input.tar.gz
[2025-06-03 16:10:03] -rw-------. 1 boinc boinc    122880 Jun  3 16:10 result.tar.gz
16:10:04 (3375490): run_atlas exited; CPU time 29.643960
16:10:04 (3375490): called boinc_finish(0)

</stderr_txt>
]]>

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