Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:51:28 (4300): wrapper (7.7.26015): starting
18:51:28 (4300): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:51:28] Arguments: --nthreads 8
[2025-06-03 18:51:28] Threads: 8
[2025-06-03 18:51:28] Checking for CVMFS
[2025-06-03 18:51:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:51:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:51:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:51:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:51:29] 2.11.2.0 2923 17828 79204 146760 3 58 16516638 20275200 1 130560 0 7870155 99.982 3444562 4437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 18:51:29] CVMFS is ok
[2025-06-03 18:51:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:51:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:51:29] Further information can be found at the LHC@home message board.
[2025-06-03 18:51:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:51:29] Checking for apptainer binary...
[2025-06-03 18:51:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:51:29] Running /usr/bin/apptainer --version
[2025-06-03 18:51:29] apptainer version 1.3.2-1.el7
[2025-06-03 18:51:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:51:31] c-204-28.aglt2.org
[2025-06-03 18:51:31] apptainer works
[2025-06-03 18:51:31] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:51:31] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:51:31] Starting ATLAS job with PandaID=6677976753
[2025-06-03 18:51:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:48:54]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:48:54] 2025-06-04 00:48:39,391 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976753/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:48:54] 2025-06-04 00:48:39,396 | INFO     | extracted standard info from prmon json
[2025-06-03 20:48:54] 2025-06-04 00:48:39,397 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:48:54] 2025-06-04 00:48:39,397 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:48:54] 2025-06-04 00:48:39,397 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:48:54] 2025-06-04 00:48:39,397 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:48:54] 2025-06-04 00:48:39,400 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:48:54] 2025-06-04 00:48:39,400 | INFO     | sum of square deviations: 471562330.0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,401 | INFO     | sum of deviations: -1494096119.0000038
[2025-06-03 20:48:54] 2025-06-04 00:48:39,401 | INFO     | mean x: 1748994617.0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,401 | INFO     | mean y: 2471655.3826086954
[2025-06-03 20:48:54] 2025-06-04 00:48:39,401 | INFO     | -- intersect: 5543978903.028107
[2025-06-03 20:48:54] 2025-06-04 00:48:39,401 | INFO     | intersect: 5543978903.028107
[2025-06-03 20:48:54] 2025-06-04 00:48:39,401 | INFO     | chi2: 2.357339638981959
[2025-06-03 20:48:54] 2025-06-04 00:48:39,402 | INFO     | sum of square deviations: 412686807.5
[2025-06-03 20:48:54] 2025-06-04 00:48:39,402 | INFO     | sum of deviations: 6035554476.0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,402 | INFO     | mean x: 1748994464.5
[2025-06-03 20:48:54] 2025-06-04 00:48:39,403 | INFO     | mean y: 2490470.8
[2025-06-03 20:48:54] 2025-06-04 00:48:39,403 | INFO     | -- intersect: -25576595598.512257
[2025-06-03 20:48:54] 2025-06-04 00:48:39,403 | INFO     | intersect: -25576595598.512257
[2025-06-03 20:48:54] 2025-06-04 00:48:39,403 | INFO     | chi2: 1.595944571592056
[2025-06-03 20:48:54] 2025-06-04 00:48:39,403 | INFO     | current chi2=1.595944571592056 (change=32.298912502855096 %)
[2025-06-03 20:48:54] 2025-06-04 00:48:39,404 | INFO     | sum of square deviations: 358927660.0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,404 | INFO     | sum of deviations: 5857982560.999999
[2025-06-03 20:48:54] 2025-06-04 00:48:39,404 | INFO     | mean x: 1748994312.0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,404 | INFO     | mean y: 2489966.7523809522
[2025-06-03 20:48:54] 2025-06-04 00:48:39,405 | INFO     | -- intersect: -28542476946.592197
[2025-06-03 20:48:54] 2025-06-04 00:48:39,405 | INFO     | intersect: -28542476946.592197
[2025-06-03 20:48:54] 2025-06-04 00:48:39,405 | INFO     | chi2: 1.5989623389023107
[2025-06-03 20:48:54] 2025-06-04 00:48:39,405 | INFO     | current chi2=1.5989623389023107 (change=-0.1890897318096894 %)
[2025-06-03 20:48:54] 2025-06-04 00:48:39,405 | INFO     | right removable region: 104
[2025-06-03 20:48:54] 2025-06-04 00:48:39,406 | INFO     | sum of square deviations: 412686807.5
[2025-06-03 20:48:54] 2025-06-04 00:48:39,406 | INFO     | sum of deviations: -18168529963.5
[2025-06-03 20:48:54] 2025-06-04 00:48:39,406 | INFO     | mean x: 1748994769.5
[2025-06-03 20:48:54] 2025-06-04 00:48:39,406 | INFO     | mean y: 2513936.118181818
[2025-06-03 20:48:54] 2025-06-04 00:48:39,407 | INFO     | -- intersect: 77001980112.81569
[2025-06-03 20:48:54] 2025-06-04 00:48:39,407 | INFO     | intersect: 77001980112.81569
[2025-06-03 20:48:54] 2025-06-04 00:48:39,407 | INFO     | chi2: 0.9030477717059401
[2025-06-03 20:48:54] 2025-06-04 00:48:39,407 | INFO     | current chi2=0.9030477717059401 (change=61.69208048035325 %)
[2025-06-03 20:48:54] 2025-06-04 00:48:39,407 | INFO     | sum of square deviations: 358927660.0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,408 | INFO     | sum of deviations: -16188560640.0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,408 | INFO     | mean x: 1748994922.0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,408 | INFO     | mean y: 2508179.4571428574
[2025-06-03 20:48:54] 2025-06-04 00:48:39,408 | INFO     | -- intersect: 78886677635.35548
[2025-06-03 20:48:54] 2025-06-04 00:48:39,408 | INFO     | intersect: 78886677635.35548
[2025-06-03 20:48:54] 2025-06-04 00:48:39,409 | INFO     | chi2: 0.8930144886095313
[2025-06-03 20:48:54] 2025-06-04 00:48:39,409 | INFO     | current chi2=0.8930144886095313 (change=1.1110467697024529 %)
[2025-06-03 20:48:54] 2025-06-04 00:48:39,409 | INFO     | left removable region: 20
[2025-06-03 20:48:54] 2025-06-04 00:48:39,409 | INFO     | sum of square deviations: 183761585.0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,410 | INFO     | sum of deviations: -1539179755.0000002
[2025-06-03 20:48:54] 2025-06-04 00:48:39,410 | INFO     | mean x: 1748994891.5
[2025-06-03 20:48:54] 2025-06-04 00:48:39,410 | INFO     | mean y: 2505074.595238095
[2025-06-03 20:48:54] 2025-06-04 00:48:39,410 | INFO     | -- intersect: 14652016987.518833
[2025-06-03 20:48:54] 2025-06-04 00:48:39,410 | INFO     | intersect: 14652016987.518833
[2025-06-03 20:48:54] 2025-06-04 00:48:39,410 | INFO     | chi2: 0.03294348405967463
[2025-06-03 20:48:54] 2025-06-04 00:48:39,411 | INFO     | -- intersect: 14652016987.518833
[2025-06-03 20:48:54] 2025-06-04 00:48:39,411 | INFO     | current memory leak: -8.38 B/s (using 84 data points, chi2=0.03)
[2025-06-03 20:48:54] 2025-06-04 00:48:39,411 | INFO     | ..............................
[2025-06-03 20:48:54] 2025-06-04 00:48:39,411 | INFO     | . Timing measurements:
[2025-06-03 20:48:54] 2025-06-04 00:48:39,411 | INFO     | . get job = 0 s
[2025-06-03 20:48:54] 2025-06-04 00:48:39,412 | INFO     | . initial setup = 2 s
[2025-06-03 20:48:54] 2025-06-04 00:48:39,412 | INFO     | . payload setup = 11 s
[2025-06-03 20:48:54] 2025-06-04 00:48:39,412 | INFO     | . stage-in = 0 s
[2025-06-03 20:48:54] 2025-06-04 00:48:39,412 | INFO     | . payload execution = 6972 s
[2025-06-03 20:48:54] 2025-06-04 00:48:39,412 | INFO     | . stage-out = 0 s
[2025-06-03 20:48:54] 2025-06-04 00:48:39,412 | INFO     | . log creation = 0 s
[2025-06-03 20:48:54] 2025-06-04 00:48:39,412 | INFO     | ..............................
[2025-06-03 20:48:54] 2025-06-04 00:48:39,506 | INFO     | 
[2025-06-03 20:48:54] 2025-06-04 00:48:39,506 | INFO     | job summary report
[2025-06-03 20:48:54] 2025-06-04 00:48:39,506 | INFO     | --------------------------------------------------
[2025-06-03 20:48:54] 2025-06-04 00:48:39,506 | INFO     | PanDA job id: 6677976753
[2025-06-03 20:48:54] 2025-06-04 00:48:39,506 | INFO     | task id: 45006595
[2025-06-03 20:48:54] 2025-06-04 00:48:39,507 | INFO     | errors: (none)
[2025-06-03 20:48:54] 2025-06-04 00:48:39,507 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:48:54] 2025-06-04 00:48:39,507 | INFO     | pilot state: finished 
[2025-06-03 20:48:54] 2025-06-04 00:48:39,507 | INFO     | transexitcode: 0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,507 | INFO     | exeerrorcode: 0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,507 | INFO     | exeerrordiag: 
[2025-06-03 20:48:54] 2025-06-04 00:48:39,508 | INFO     | exitcode: 0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,508 | INFO     | exitmsg: OK
[2025-06-03 20:48:54] 2025-06-04 00:48:39,508 | INFO     | cpuconsumptiontime: 51367 s
[2025-06-03 20:48:54] 2025-06-04 00:48:39,508 | INFO     | nevents: 400
[2025-06-03 20:48:54] 2025-06-04 00:48:39,508 | INFO     | neventsw: 0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,508 | INFO     | pid: 14433
[2025-06-03 20:48:54] 2025-06-04 00:48:39,509 | INFO     | pgrp: 14433
[2025-06-03 20:48:54] 2025-06-04 00:48:39,509 | INFO     | corecount: 8
[2025-06-03 20:48:54] 2025-06-04 00:48:39,509 | INFO     | event service: False
[2025-06-03 20:48:54] 2025-06-04 00:48:39,509 | INFO     | sizes: {0: 2404356, 1: 2405212, 7: 2405418, 12: 2405446, 6988: 2432483, 6990: 2441608, 6997: 2441722}
[2025-06-03 20:48:54] 2025-06-04 00:48:39,509 | INFO     | --------------------------------------------------
[2025-06-03 20:48:54] 2025-06-04 00:48:39,509 | INFO     | 
[2025-06-03 20:48:54] 2025-06-04 00:48:39,510 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 20:48:54] 2025-06-04 00:48:39,540 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,540 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,540 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:48:54] 2025-06-04 00:48:39,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:48:54] 2025-06-04 00:48:39,544 | INFO     | job 6677976753 has completed (purged errors)
[2025-06-03 20:48:54] 2025-06-04 00:48:39,544 | INFO     | overall cleanup function is called
[2025-06-03 20:48:54] 2025-06-04 00:48:40,550 | INFO     | --- collectZombieJob: --- 10, [14433]
[2025-06-03 20:48:54] 2025-06-04 00:48:40,550 | INFO     | zombie collector waiting for pid 14433
[2025-06-03 20:48:54] 2025-06-04 00:48:40,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:48:54] 2025-06-04 00:48:40,551 | INFO     | collected zombie processes
[2025-06-03 20:48:54] 2025-06-04 00:48:40,551 | INFO     | will attempt to kill all subprocesses of pid=14433
[2025-06-03 20:48:54] 2025-06-04 00:48:40,641 | INFO     | process IDs to be killed: [14433] (in reverse order)
[2025-06-03 20:48:54] 2025-06-04 00:48:40,695 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:48:54] 2025-06-04 00:48:40,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:48:54] 2025-06-04 00:48:40,700 | INFO     | did not find any defunct processes belonging to 14433
[2025-06-03 20:48:54] 2025-06-04 00:48:40,704 | INFO     | did not find any defunct processes belonging to 14433
[2025-06-03 20:48:54] 2025-06-04 00:48:40,704 | INFO     | ready for new job
[2025-06-03 20:48:54] 2025-06-04 00:48:40,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:48:54] 2025-06-04 00:48:40,706 | INFO     | **************************************
[2025-06-03 20:48:54] 2025-06-04 00:48:40,706 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:48:54] 2025-06-04 00:48:40,706 | INFO     | **************************************
[2025-06-03 20:48:54] 2025-06-04 00:48:40,706 | INFO     | 
[2025-06-03 20:48:54] 2025-06-04 00:48:40,707 | INFO     | architecture information:
[2025-06-03 20:48:54] 2025-06-04 00:48:40,708 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:48:54] 2025-06-04 00:48:40,728 | INFO     | cat /etc/os-release:
[2025-06-03 20:48:54] NAME="CentOS Linux"
[2025-06-03 20:48:54] VERSION="7 (Core)"
[2025-06-03 20:48:54] ID="centos"
[2025-06-03 20:48:54] ID_LIKE="rhel fedora"
[2025-06-03 20:48:54] VERSION_ID="7"
[2025-06-03 20:48:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:48:54] ANSI_COLOR="0;31"
[2025-06-03 20:48:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:48:54] HOME_URL="https://www.centos.org/"
[2025-06-03 20:48:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:48:54] 
[2025-06-03 20:48:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:48:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:48:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:48:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:48:54] 
[2025-06-03 20:48:54] 2025-06-04 00:48:40,729 | INFO     | **************************************
[2025-06-03 20:48:54] 2025-06-04 00:48:41,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 20:48:54] 2025-06-04 00:48:41,250 | INFO     | sufficient remaining disk space (18608029696 B)
[2025-06-03 20:48:54] 2025-06-04 00:48:41,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:48:54] 2025-06-04 00:48:41,251 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:48:54] 2025-06-04 00:48:41,251 | INFO     | update_server=False
[2025-06-03 20:48:54] 2025-06-04 00:48:41,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:48:54] 2025-06-04 00:48:41,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:48:54] 2025-06-04 00:48:41,252 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 20:48:54] 2025-06-04 00:48:41,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:48:54] 2025-06-04 00:48:41,253 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:48:54] 2025-06-04 00:48:41,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:48:54] 2025-06-04 00:48:41,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:48:54] 2025-06-04 00:48:41,459 | INFO     | all payload control threads have been joined
[2025-06-03 20:48:54] 2025-06-04 00:48:41,739 | INFO     | all data control threads have been joined
[2025-06-03 20:48:54] 2025-06-04 00:48:41,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:48:54] 2025-06-04 00:48:41,781 | INFO     | aborting loop
[2025-06-03 20:48:54] 2025-06-04 00:48:42,253 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:42,259 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:42,384 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:42,465 | INFO     | [payload] control thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:42,497 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:42,516 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:42,569 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:42,713 | INFO     | all job control threads have been joined
[2025-06-03 20:48:54] 2025-06-04 00:48:42,745 | INFO     | [data] control thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:42,781 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:43,084 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:43,258 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:43,520 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:43,525 | INFO     | [job] validate thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:43,576 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:43,719 | INFO     | [job] control thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:43,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:48:54] 2025-06-04 00:48:47,883 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:48:54] 2025-06-04 00:48:49,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781224175424)>', '<ExcThread(monitor, started 139779903579904)>']
[2025-06-03 20:48:54] 2025-06-04 00:48:50,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:48:54] 2025-06-04 00:48:50,300 | INFO     | [monitor] control thread has ended
[2025-06-03 20:48:54] 2025-06-04 00:48:54,611 | INFO     | all workflow threads have been joined
[2025-06-03 20:48:54] 2025-06-04 00:48:54,611 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:48:54] 2025-06-04 00:48:54,611 | INFO     | traces error code: 0
[2025-06-03 20:48:54] 2025-06-04 00:48:54,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:48:54] 2025-06-04 00:48:54,731 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:48:54] 2025-06-04 00:48:54,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:48:54] 2025-06-04 00:48:54,740 [wrapper] pilotpid: 7897
[2025-06-03 20:48:54] 2025-06-04 00:48:54,745 [wrapper] Pilot exit status: 0
[2025-06-03 20:48:54] 2025-06-04 00:48:54,764 [wrapper] pandaids: 6677976753
[2025-06-03 20:48:54] 2025-06-04 00:48:54,807 [wrapper] cleanup supervisor_pilot 22518 7898
[2025-06-03 20:48:54] 2025-06-04 00:48:54,812 [wrapper] Test setup, not cleaning
[2025-06-03 20:48:54] 2025-06-04 00:48:54,817 [wrapper] apfmon messages muted
[2025-06-03 20:48:54] 2025-06-04 00:48:54,821 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:48:54] 2025-06-04 00:48:54,826 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:48:54]  *** Error codes and diagnostics ***
[2025-06-03 20:48:54]     "exeErrorCode": 0,
[2025-06-03 20:48:54]     "exeErrorDiag": "",
[2025-06-03 20:48:54]     "pilotErrorCode": 0,
[2025-06-03 20:48:54]     "pilotErrorDiag": "",
[2025-06-03 20:48:54]  *** Listing of results directory ***
[2025-06-03 20:48:54] total 393880
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 15:11 queuedata.json
[2025-06-03 20:48:54] -rwx------ 1 boincer umatlas     37140 Jun  3 15:12 runpilot2-wrapper.sh
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas       100 Jun  3 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:48:54] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 18:51 run_atlas
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas       105 Jun  3 18:51 job.xml
[2025-06-03 20:48:54] -rw-r--r-- 2 boincer umatlas 214828052 Jun  3 18:51 EVNT.45006593._001743.pool.root.1
[2025-06-03 20:48:54] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:51 start_atlas.sh
[2025-06-03 20:48:54] drwxrwx--x 2 boincer umatlas      4096 Jun  3 18:51 shared
[2025-06-03 20:48:54] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 18:51 input.tar.gz
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas         0 Jun  3 18:51 boinc_lockfile
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 18:51 pandaJob.out
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas    986861 Jun  3 18:51 agis_schedconf.cvmfs.json
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas   1603667 Jun  3 18:51 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:48:54] drwx------ 4 boincer umatlas      4096 Jun  3 18:51 pilot3
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas 182739032 Jun  3 20:47 HITS.45006595._043479.pool.root.1
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas       529 Jun  3 20:48 boinc_task_state.xml
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas        95 Jun  3 20:48 pilot_heartbeat.json
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas      1049 Jun  3 20:48 memory_monitor_summary.json
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas      5825 Jun  3 20:48 init_data.xml
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas    320741 Jun  3 20:48 log.45006595._043479.job.log.tgz.1
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas      7745 Jun  3 20:48 heartbeat.json
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 20:48 boinc_mmap_file
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas        27 Jun  3 20:48 wrapper_checkpoint.txt
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas      4476 Jun  3 20:48 pilotlog.txt
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas    643280 Jun  3 20:48 log.45006595._043479.job.log.1
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas       357 Jun  3 20:48 output.list
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas       620 Jun  3 20:48 runtime_log
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas    983040 Jun  3 20:48 result.tar.gz
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 20:48 runtime_log.err
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas       659 Jun  3 20:48 3jbMDmuEmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCiZKDm8473Ln.diag
[2025-06-03 20:48:54] -rw-r--r-- 1 boincer umatlas     20795 Jun  3 20:48 stderr.txt
[2025-06-03 20:48:54] HITS file was successfully produced:
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas 182739032 Jun  3 20:47 shared/HITS.pool.root.1
[2025-06-03 20:48:54]  *** Contents of shared directory: ***
[2025-06-03 20:48:54] total 389736
[2025-06-03 20:48:54] -rw-r--r-- 2 boincer umatlas 214828052 Jun  3 18:51 ATLAS.root_0
[2025-06-03 20:48:54] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:51 start_atlas.sh
[2025-06-03 20:48:54] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 18:51 input.tar.gz
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas 182739032 Jun  3 20:47 HITS.pool.root.1
[2025-06-03 20:48:54] -rw------- 1 boincer umatlas    983040 Jun  3 20:48 result.tar.gz
20:48:56 (4300): run_atlas exited; CPU time 51321.045374
20:48:56 (4300): called boinc_finish(0)

</stderr_txt>
]]>

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