Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:52:07 (9067): wrapper (7.7.26015): starting
18:52:07 (9067): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:52:07] Arguments: --nthreads 8
[2025-06-03 18:52:07] Threads: 8
[2025-06-03 18:52:07] Checking for CVMFS
[2025-06-03 18:52:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:52:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:52:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:52:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:52:07] 2.11.2.0 2886 34819 71812 146760 2 58 16866319 20275201 1 130560 0 10983233 99.975 6530307 7931 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 18:52:07] CVMFS is ok
[2025-06-03 18:52:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:52:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:52:07] Further information can be found at the LHC@home message board.
[2025-06-03 18:52:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:52:07] Checking for apptainer binary...
[2025-06-03 18:52:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:52:07] Running /usr/bin/apptainer --version
[2025-06-03 18:52:07] apptainer version 1.3.2-1.el7
[2025-06-03 18:52:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:52:09] c-115-10.aglt2.org
[2025-06-03 18:52:09] apptainer works
[2025-06-03 18:52:09] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:52:09] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:52:09] Starting ATLAS job with PandaID=6677976237
[2025-06-03 18:52:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:32:32]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:32:32]  filesize=320209
[2025-06-03 20:32:32]  filetype=log
[2025-06-03 20:32:32]  guid=55fecb93-ba99-44f3-95ea-59c80e333111
[2025-06-03 20:32:32]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 20:32:32]  is_altstaged=None
[2025-06-03 20:32:32]  is_tar=False
[2025-06-03 20:32:32]  lfn=log.45006595._043212.job.log.tgz.1
[2025-06-03 20:32:32]  mtime=0
[2025-06-03 20:32:32]  protocol_id=None
[2025-06-03 20:32:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 20:32:32]  replicas=None
[2025-06-03 20:32:32]  scope=mc23_13p6TeV
[2025-06-03 20:32:32]  status=None
[2025-06-03 20:32:32]  status_code=0
[2025-06-03 20:32:32]  storage_token=
[2025-06-03 20:32:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677976237/log.45006595._043212.job.log.tgz.1
[2025-06-03 20:32:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/3d/log.45006595._043212.job.log.tgz.1
[2025-06-03 20:32:32]  workdir=None
[2025-06-03 20:32:32] ]
[2025-06-03 20:32:32] 2025-06-04 00:32:06,924 | INFO     | transferring file log.45006595._043212.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677976237/log.45006595._043212.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 20:32:32] 2025-06-04 00:32:06,925 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677976237/log.45006595._043212.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._043212.job
[2025-06-03 20:32:32] 2025-06-04 00:32:06,951 | INFO     | adding to output.list: log.45006595._043212.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/3d/log.45006595._043212.job.log.tg
[2025-06-03 20:32:32] 2025-06-04 00:32:06,953 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 20:32:32] 2025-06-04 00:32:06,953 | INFO     | summary of transferred files:
[2025-06-03 20:32:32] 2025-06-04 00:32:06,953 | INFO     |  -- lfn=log.45006595._043212.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 20:32:32] 2025-06-04 00:32:06,954 | INFO     | stage-out finished correctly
[2025-06-03 20:32:32] 2025-06-04 00:32:07,041 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 20:32:32] 2025-06-04 00:32:07,121 | INFO     | job 6677976237 has state=finished
[2025-06-03 20:32:32] 2025-06-04 00:32:07,122 | INFO     | preparing for final server update for job 6677976237 in state='finished'
[2025-06-03 20:32:32] 2025-06-04 00:32:07,123 | INFO     | this job has now completed (state=finished)
[2025-06-03 20:32:32] 2025-06-04 00:32:07,123 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 20:32:32] 2025-06-04 00:32:07,123 | INFO     | log transfer has been attempted: DONE
[2025-06-03 20:32:32] 2025-06-04 00:32:07,123 | INFO     | job 6677976237 has finished - writing final server update
[2025-06-03 20:32:32] 2025-06-04 00:32:07,124 | INFO     | total number of processed events: 400 (read)
[2025-06-03 20:32:32] 2025-06-04 00:32:07,126 | INFO     | executing command: lscpu
[2025-06-03 20:32:32] 2025-06-04 00:32:07,153 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 20:32:32] 2025-06-04 00:32:10,975 | WARNING  | process 19061 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 20:32:32] 2025-06-04 00:32:10,976 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976237/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:32:32] 2025-06-04 00:32:11,061 | INFO     | number of running child processes to parent process 19061: 1
[2025-06-03 20:32:32] 2025-06-04 00:32:11,061 | INFO     | maximum number of monitored processes: 6
[2025-06-03 20:32:32] 2025-06-04 00:32:12,409 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 20:32:32] 2025-06-04 00:32:12,409 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976237/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:32:32] 2025-06-04 00:32:12,410 | INFO     | extracted standard info from prmon json
[2025-06-03 20:32:32] 2025-06-04 00:32:12,410 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:32:32] 2025-06-04 00:32:12,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:32:32] 2025-06-04 00:32:12,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:32:32] 2025-06-04 00:32:12,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:32:32] 2025-06-04 00:32:12,414 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:32:32] 2025-06-04 00:32:12,415 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 20:32:32] 2025-06-04 00:32:12,415 | INFO     | sum of deviations: -7219761323.0
[2025-06-03 20:32:32] 2025-06-04 00:32:12,416 | INFO     | mean x: 1748994227.0
[2025-06-03 20:32:32] 2025-06-04 00:32:12,416 | INFO     | mean y: 2539206.2197802197
[2025-06-03 20:32:32] 2025-06-04 00:32:12,416 | INFO     | -- intersect: 54048228906.606094
[2025-06-03 20:32:32] 2025-06-04 00:32:12,416 | INFO     | intersect: 54048228906.606094
[2025-06-03 20:32:32] 2025-06-04 00:32:12,417 | INFO     | chi2: 0.08939024971509994
[2025-06-03 20:32:32] 2025-06-04 00:32:12,417 | INFO     | -- intersect: 54048228906.606094
[2025-06-03 20:32:32] 2025-06-04 00:32:12,417 | INFO     | current memory leak: -30.90 B/s (using 91 data points, chi2=0.09)
[2025-06-03 20:32:32] 2025-06-04 00:32:12,418 | INFO     | ..............................
[2025-06-03 20:32:32] 2025-06-04 00:32:12,418 | INFO     | . Timing measurements:
[2025-06-03 20:32:32] 2025-06-04 00:32:12,418 | INFO     | . get job = 0 s
[2025-06-03 20:32:32] 2025-06-04 00:32:12,418 | INFO     | . initial setup = 2 s
[2025-06-03 20:32:32] 2025-06-04 00:32:12,418 | INFO     | . payload setup = 11 s
[2025-06-03 20:32:32] 2025-06-04 00:32:12,418 | INFO     | . stage-in = 0 s
[2025-06-03 20:32:32] 2025-06-04 00:32:12,418 | INFO     | . payload execution = 5950 s
[2025-06-03 20:32:32] 2025-06-04 00:32:12,419 | INFO     | . stage-out = 0 s
[2025-06-03 20:32:32] 2025-06-04 00:32:12,419 | INFO     | . log creation = 0 s
[2025-06-03 20:32:32] 2025-06-04 00:32:12,419 | INFO     | ..............................
[2025-06-03 20:32:32] 2025-06-04 00:32:12,504 | INFO     | 
[2025-06-03 20:32:32] 2025-06-04 00:32:12,504 | INFO     | job summary report
[2025-06-03 20:32:32] 2025-06-04 00:32:12,504 | INFO     | --------------------------------------------------
[2025-06-03 20:32:32] 2025-06-04 00:32:12,505 | INFO     | PanDA job id: 6677976237
[2025-06-03 20:32:32] 2025-06-04 00:32:12,505 | INFO     | task id: 45006595
[2025-06-03 20:32:32] 2025-06-04 00:32:12,505 | INFO     | errors: (none)
[2025-06-03 20:32:32] 2025-06-04 00:32:12,505 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:32:32] 2025-06-04 00:32:12,505 | INFO     | pilot state: finished 
[2025-06-03 20:32:32] 2025-06-04 00:32:12,505 | INFO     | transexitcode: 0
[2025-06-03 20:32:32] 2025-06-04 00:32:12,506 | INFO     | exeerrorcode: 0
[2025-06-03 20:32:32] 2025-06-04 00:32:12,506 | INFO     | exeerrordiag: 
[2025-06-03 20:32:32] 2025-06-04 00:32:12,506 | INFO     | exitcode: 0
[2025-06-03 20:32:32] 2025-06-04 00:32:12,506 | INFO     | exitmsg: OK
[2025-06-03 20:32:32] 2025-06-04 00:32:12,506 | INFO     | cpuconsumptiontime: 43369 s
[2025-06-03 20:32:32] 2025-06-04 00:32:12,506 | INFO     | nevents: 400
[2025-06-03 20:32:32] 2025-06-04 00:32:12,507 | INFO     | neventsw: 0
[2025-06-03 20:32:32] 2025-06-04 00:32:12,507 | INFO     | pid: 19061
[2025-06-03 20:32:32] 2025-06-04 00:32:12,507 | INFO     | pgrp: 19061
[2025-06-03 20:32:32] 2025-06-04 00:32:12,507 | INFO     | corecount: 8
[2025-06-03 20:32:32] 2025-06-04 00:32:12,507 | INFO     | event service: False
[2025-06-03 20:32:32] 2025-06-04 00:32:12,508 | INFO     | sizes: {0: 2404356, 1: 2405212, 7: 2405418, 12: 2405446, 5965: 2432019, 5966: 2441144, 5972: 2441258}
[2025-06-03 20:32:32] 2025-06-04 00:32:12,508 | INFO     | --------------------------------------------------
[2025-06-03 20:32:32] 2025-06-04 00:32:12,508 | INFO     | 
[2025-06-03 20:32:32] 2025-06-04 00:32:12,508 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 20:32:32] 2025-06-04 00:32:12,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,536 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,536 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,536 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,539 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:32:32] 2025-06-04 00:32:12,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,539 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:32:32] 2025-06-04 00:32:12,539 | INFO     | job 6677976237 has completed (purged errors)
[2025-06-03 20:32:32] 2025-06-04 00:32:12,540 | INFO     | overall cleanup function is called
[2025-06-03 20:32:32] 2025-06-04 00:32:13,548 | INFO     | --- collectZombieJob: --- 10, [19061]
[2025-06-03 20:32:32] 2025-06-04 00:32:13,548 | INFO     | zombie collector waiting for pid 19061
[2025-06-03 20:32:32] 2025-06-04 00:32:13,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:32:32] 2025-06-04 00:32:13,548 | INFO     | collected zombie processes
[2025-06-03 20:32:32] 2025-06-04 00:32:13,549 | INFO     | will attempt to kill all subprocesses of pid=19061
[2025-06-03 20:32:32] 2025-06-04 00:32:13,630 | INFO     | process IDs to be killed: [19061] (in reverse order)
[2025-06-03 20:32:32] 2025-06-04 00:32:13,687 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:32:32] 2025-06-04 00:32:13,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:32:32] 2025-06-04 00:32:13,691 | INFO     | did not find any defunct processes belonging to 19061
[2025-06-03 20:32:32] 2025-06-04 00:32:13,694 | INFO     | did not find any defunct processes belonging to 19061
[2025-06-03 20:32:32] 2025-06-04 00:32:13,694 | INFO     | ready for new job
[2025-06-03 20:32:32] 2025-06-04 00:32:13,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:32:32] 2025-06-04 00:32:13,696 | INFO     | **************************************
[2025-06-03 20:32:32] 2025-06-04 00:32:13,696 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:32:32] 2025-06-04 00:32:13,696 | INFO     | **************************************
[2025-06-03 20:32:32] 2025-06-04 00:32:13,696 | INFO     | 
[2025-06-03 20:32:32] 2025-06-04 00:32:13,697 | INFO     | architecture information:
[2025-06-03 20:32:32] 2025-06-04 00:32:13,697 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:32:32] 2025-06-04 00:32:13,716 | INFO     | cat /etc/os-release:
[2025-06-03 20:32:32] NAME="CentOS Linux"
[2025-06-03 20:32:32] VERSION="7 (Core)"
[2025-06-03 20:32:32] ID="centos"
[2025-06-03 20:32:32] ID_LIKE="rhel fedora"
[2025-06-03 20:32:32] VERSION_ID="7"
[2025-06-03 20:32:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:32:32] ANSI_COLOR="0;31"
[2025-06-03 20:32:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:32:32] HOME_URL="https://www.centos.org/"
[2025-06-03 20:32:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:32:32] 
[2025-06-03 20:32:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:32:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:32:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:32:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:32:32] 
[2025-06-03 20:32:32] 2025-06-04 00:32:13,716 | INFO     | **************************************
[2025-06-03 20:32:32] 2025-06-04 00:32:14,219 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 20:32:32] 2025-06-04 00:32:14,240 | INFO     | sufficient remaining disk space (18647875584 B)
[2025-06-03 20:32:32] 2025-06-04 00:32:14,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:32:32] 2025-06-04 00:32:14,241 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:32:32] 2025-06-04 00:32:14,241 | INFO     | update_server=False
[2025-06-03 20:32:32] 2025-06-04 00:32:14,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:32:32] 2025-06-04 00:32:14,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:32:32] 2025-06-04 00:32:14,337 | INFO     | all job control threads have been joined
[2025-06-03 20:32:32] 2025-06-04 00:32:14,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:32:32] 2025-06-04 00:32:14,568 | INFO     | aborting loop
[2025-06-03 20:32:32] 2025-06-04 00:32:14,767 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:32:32] 2025-06-04 00:32:14,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:32:32] 2025-06-04 00:32:14,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:32:32] 2025-06-04 00:32:15,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:32:32] 2025-06-04 00:32:15,078 | INFO     | all data control threads have been joined
[2025-06-03 20:32:32] 2025-06-04 00:32:15,247 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:15,248 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:15,343 | INFO     | [job] control thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:15,573 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:15,604 | INFO     | all payload control threads have been joined
[2025-06-03 20:32:32] 2025-06-04 00:32:15,766 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:16,062 | INFO     | [job] validate thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:16,084 | INFO     | [data] control thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:16,106 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:16,268 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:16,367 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:16,458 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:16,610 | INFO     | [payload] control thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:16,814 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:17,058 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:17,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:32:32] 2025-06-04 00:32:21,637 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:24,529 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:32:32] 2025-06-04 00:32:25,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:32:32] 2025-06-04 00:32:27,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748710217536)>', '<ExcThread(monitor, started 139747800364800)>']
[2025-06-03 20:32:32] 2025-06-04 00:32:27,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:32:32] 2025-06-04 00:32:27,835 | INFO     | [monitor] control thread has ended
[2025-06-03 20:32:32] 2025-06-04 00:32:32,360 | INFO     | all workflow threads have been joined
[2025-06-03 20:32:32] 2025-06-04 00:32:32,360 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:32:32] 2025-06-04 00:32:32,361 | INFO     | traces error code: 0
[2025-06-03 20:32:32] 2025-06-04 00:32:32,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:32:32] 2025-06-04 00:32:32,487 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:32:32] 2025-06-04 00:32:32,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:32:32] 2025-06-04 00:32:32,495 [wrapper] pilotpid: 12654
[2025-06-03 20:32:32] 2025-06-04 00:32:32,499 [wrapper] Pilot exit status: 0
[2025-06-03 20:32:32] 2025-06-04 00:32:32,516 [wrapper] pandaids: 6677976237
[2025-06-03 20:32:32] 2025-06-04 00:32:32,554 [wrapper] cleanup supervisor_pilot 11455 12655
[2025-06-03 20:32:32] 2025-06-04 00:32:32,559 [wrapper] Test setup, not cleaning
[2025-06-03 20:32:32] 2025-06-04 00:32:32,563 [wrapper] apfmon messages muted
[2025-06-03 20:32:32] 2025-06-04 00:32:32,568 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:32:32] 2025-06-04 00:32:32,572 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:32:32]  *** Error codes and diagnostics ***
[2025-06-03 20:32:32]     "exeErrorCode": 0,
[2025-06-03 20:32:32]     "exeErrorDiag": "",
[2025-06-03 20:32:32]     "pilotErrorCode": 0,
[2025-06-03 20:32:32]     "pilotErrorDiag": "",
[2025-06-03 20:32:32]  *** Listing of results directory ***
[2025-06-03 20:32:32] total 386628
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 20:32:32] -rwx------ 1 boincer umatlas     37140 Jun  3 15:07 runpilot2-wrapper.sh
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 15:07 queuedata.json
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas       100 Jun  3 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:32:32] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 18:52 run_atlas
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas       105 Jun  3 18:52 job.xml
[2025-06-03 20:32:32] -rw-r--r-- 2 boincer umatlas 215457165 Jun  3 18:52 EVNT.45006593._001732.pool.root.1
[2025-06-03 20:32:32] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:52 start_atlas.sh
[2025-06-03 20:32:32] drwxrwx--x 2 boincer umatlas      4096 Jun  3 18:52 shared
[2025-06-03 20:32:32] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 18:52 input.tar.gz
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas         0 Jun  3 18:52 boinc_lockfile
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 18:52 pandaJob.out
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas    986861 Jun  3 18:52 agis_schedconf.cvmfs.json
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas   1603667 Jun  3 18:52 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:32:32] drwx------ 4 boincer umatlas      4096 Jun  3 18:52 pilot3
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas      5825 Jun  3 20:29 init_data.xml
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas       529 Jun  3 20:31 boinc_task_state.xml
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas 174872836 Jun  3 20:31 HITS.45006595._043212.pool.root.1
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas        95 Jun  3 20:31 pilot_heartbeat.json
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas      1049 Jun  3 20:32 memory_monitor_summary.json
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas    320209 Jun  3 20:32 log.45006595._043212.job.log.tgz.1
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas      7743 Jun  3 20:32 heartbeat.json
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas        27 Jun  3 20:32 wrapper_checkpoint.txt
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 20:32 boinc_mmap_file
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas      4425 Jun  3 20:32 pilotlog.txt
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas    555893 Jun  3 20:32 log.45006595._043212.job.log.1
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas       357 Jun  3 20:32 output.list
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas       620 Jun  3 20:32 runtime_log
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas    890880 Jun  3 20:32 result.tar.gz
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 20:32 runtime_log.err
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas       658 Jun  3 20:32 A4fLDmr9lg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAfZKDmbJmY8m.diag
[2025-06-03 20:32:32] -rw-r--r-- 1 boincer umatlas     21061 Jun  3 20:32 stderr.txt
[2025-06-03 20:32:32] HITS file was successfully produced:
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas 174872836 Jun  3 20:31 shared/HITS.pool.root.1
[2025-06-03 20:32:32]  *** Contents of shared directory: ***
[2025-06-03 20:32:32] total 382572
[2025-06-03 20:32:32] -rw-r--r-- 2 boincer umatlas 215457165 Jun  3 18:52 ATLAS.root_0
[2025-06-03 20:32:32] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:52 start_atlas.sh
[2025-06-03 20:32:32] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 18:52 input.tar.gz
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas 174872836 Jun  3 20:31 HITS.pool.root.1
[2025-06-03 20:32:32] -rw------- 1 boincer umatlas    890880 Jun  3 20:32 result.tar.gz
20:32:34 (9067): run_atlas exited; CPU time 43326.548790
20:32:34 (9067): called boinc_finish(0)

</stderr_txt>
]]>

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