Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:52:57 (9985): wrapper (7.7.26015): starting
18:52:57 (9985): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 18:52:57] Arguments: --nthreads 12
[2025-06-03 18:52:57] Threads: 12
[2025-06-03 18:52:57] Checking for CVMFS
[2025-06-03 18:52:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:52:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:52:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:52:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:52:57] 2.11.2.0 2925 34866 85536 146760 2 58 13980811 20275200 1 130560 0 14857880 99.985 6027526 7261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 18:52:57] CVMFS is ok
[2025-06-03 18:52:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:52:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:52:57] Further information can be found at the LHC@home message board.
[2025-06-03 18:52:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:52:57] Checking for apptainer binary...
[2025-06-03 18:52:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:52:57] Running /usr/bin/apptainer --version
[2025-06-03 18:52:58] apptainer version 1.3.2-1.el7
[2025-06-03 18:52:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:52:59] c-205-10.aglt2.org
[2025-06-03 18:52:59] apptainer works
[2025-06-03 18:52:59] Set ATHENA_PROC_NUMBER=12
[2025-06-03 18:52:59] Set ATHENA_CORE_NUMBER=12
[2025-06-03 18:52:59] Starting ATLAS job with PandaID=6677917726
[2025-06-03 18:52:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:56:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:56:20]  is_tar=False
[2025-06-03 19:56:20]  lfn=log.45006595._041234.job.log.tgz.1
[2025-06-03 19:56:20]  mtime=0
[2025-06-03 19:56:20]  protocol_id=None
[2025-06-03 19:56:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 19:56:20]  replicas=None
[2025-06-03 19:56:20]  scope=mc23_13p6TeV
[2025-06-03 19:56:20]  status=None
[2025-06-03 19:56:20]  status_code=0
[2025-06-03 19:56:20]  storage_token=
[2025-06-03 19:56:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677917726/log.45006595._041234.job.log.tgz.1
[2025-06-03 19:56:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/d6/log.45006595._041234.job.log.tgz.1
[2025-06-03 19:56:20]  workdir=None
[2025-06-03 19:56:20] ]
[2025-06-03 19:56:20] 2025-06-03 23:55:57,107 | INFO     | transferring file log.45006595._041234.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677917726/log.45006595._041234.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 19:56:20] 2025-06-03 23:55:57,107 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677917726/log.45006595._041234.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._041234.job
[2025-06-03 19:56:20] 2025-06-03 23:55:57,135 | INFO     | adding to output.list: log.45006595._041234.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/d6/log.45006595._041234.job.log.tg
[2025-06-03 19:56:20] 2025-06-03 23:55:57,137 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 19:56:20] 2025-06-03 23:55:57,137 | INFO     | summary of transferred files:
[2025-06-03 19:56:20] 2025-06-03 23:55:57,137 | INFO     |  -- lfn=log.45006595._041234.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 19:56:20] 2025-06-03 23:55:57,137 | INFO     | stage-out finished correctly
[2025-06-03 19:56:20] 2025-06-03 23:55:57,317 | INFO     | PID=13629 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 19:56:20] 2025-06-03 23:55:59,808 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 19:56:20] 2025-06-03 23:56:00,650 | INFO     | job 6677917726 has state=finished
[2025-06-03 19:56:20] 2025-06-03 23:56:00,650 | INFO     | preparing for final server update for job 6677917726 in state='finished'
[2025-06-03 19:56:20] 2025-06-03 23:56:00,660 | INFO     | this job has now completed (state=finished)
[2025-06-03 19:56:20] 2025-06-03 23:56:00,660 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 19:56:20] 2025-06-03 23:56:00,660 | INFO     | log transfer has been attempted: DONE
[2025-06-03 19:56:20] 2025-06-03 23:56:00,661 | INFO     | job 6677917726 has finished - writing final server update
[2025-06-03 19:56:20] 2025-06-03 23:56:00,661 | INFO     | total number of processed events: 400 (read)
[2025-06-03 19:56:20] 2025-06-03 23:56:00,662 | INFO     | executing command: lscpu
[2025-06-03 19:56:20] 2025-06-03 23:56:00,693 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 19:56:20] 2025-06-03 23:56:02,329 | INFO     | 3772s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 19:56:20] 2025-06-03 23:56:02,589 | WARNING  | process 20050 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 19:56:20] 2025-06-03 23:56:02,589 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677917726/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:56:20] 2025-06-03 23:56:02,677 | INFO     | number of running child processes to parent process 20050: 1
[2025-06-03 19:56:20] 2025-06-03 23:56:02,677 | INFO     | maximum number of monitored processes: 6
[2025-06-03 19:56:20] 2025-06-03 23:56:05,180 | INFO     | monitor loop #285: job 0:6677917726 is in state 'finished'
[2025-06-03 19:56:20] 2025-06-03 23:56:05,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:56:20] 2025-06-03 23:56:05,378 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 19:56:20] 2025-06-03 23:56:05,378 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677917726/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:56:20] 2025-06-03 23:56:05,379 | INFO     | extracted standard info from prmon json
[2025-06-03 19:56:20] 2025-06-03 23:56:05,379 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:56:20] 2025-06-03 23:56:05,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:56:20] 2025-06-03 23:56:05,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:56:20] 2025-06-03 23:56:05,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:56:20] 2025-06-03 23:56:05,382 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:56:20] 2025-06-03 23:56:05,382 | INFO     | sum of square deviations: 51573060.0
[2025-06-03 19:56:20] 2025-06-03 23:56:05,383 | INFO     | sum of deviations: -4483439610.0
[2025-06-03 19:56:20] 2025-06-03 23:56:05,383 | INFO     | mean x: 1748993175.0
[2025-06-03 19:56:20] 2025-06-03 23:56:05,383 | INFO     | mean y: 2739597.581818182
[2025-06-03 19:56:20] 2025-06-03 23:56:05,383 | INFO     | -- intersect: 152049278593.2253
[2025-06-03 19:56:20] 2025-06-03 23:56:05,384 | INFO     | intersect: 152049278593.2253
[2025-06-03 19:56:20] 2025-06-03 23:56:05,384 | INFO     | chi2: 0.0503318126764763
[2025-06-03 19:56:20] 2025-06-03 23:56:05,384 | INFO     | -- intersect: 152049278593.2253
[2025-06-03 19:56:20] 2025-06-03 23:56:05,384 | INFO     | current memory leak: -86.93 B/s (using 55 data points, chi2=0.05)
[2025-06-03 19:56:20] 2025-06-03 23:56:05,385 | INFO     | ..............................
[2025-06-03 19:56:20] 2025-06-03 23:56:05,385 | INFO     | . Timing measurements:
[2025-06-03 19:56:20] 2025-06-03 23:56:05,385 | INFO     | . get job = 0 s
[2025-06-03 19:56:20] 2025-06-03 23:56:05,385 | INFO     | . initial setup = 2 s
[2025-06-03 19:56:20] 2025-06-03 23:56:05,385 | INFO     | . payload setup = 9 s
[2025-06-03 19:56:20] 2025-06-03 23:56:05,386 | INFO     | . stage-in = 0 s
[2025-06-03 19:56:20] 2025-06-03 23:56:05,386 | INFO     | . payload execution = 3734 s
[2025-06-03 19:56:20] 2025-06-03 23:56:05,386 | INFO     | . stage-out = 0 s
[2025-06-03 19:56:20] 2025-06-03 23:56:05,386 | INFO     | . log creation = 0 s
[2025-06-03 19:56:20] 2025-06-03 23:56:05,386 | INFO     | ..............................
[2025-06-03 19:56:20] 2025-06-03 23:56:05,472 | INFO     | 
[2025-06-03 19:56:20] 2025-06-03 23:56:05,472 | INFO     | job summary report
[2025-06-03 19:56:20] 2025-06-03 23:56:05,472 | INFO     | --------------------------------------------------
[2025-06-03 19:56:20] 2025-06-03 23:56:05,472 | INFO     | PanDA job id: 6677917726
[2025-06-03 19:56:20] 2025-06-03 23:56:05,473 | INFO     | task id: 45006595
[2025-06-03 19:56:20] 2025-06-03 23:56:05,473 | INFO     | errors: (none)
[2025-06-03 19:56:20] 2025-06-03 23:56:05,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:56:20] 2025-06-03 23:56:05,473 | INFO     | pilot state: finished 
[2025-06-03 19:56:20] 2025-06-03 23:56:05,473 | INFO     | transexitcode: 0
[2025-06-03 19:56:20] 2025-06-03 23:56:05,473 | INFO     | exeerrorcode: 0
[2025-06-03 19:56:20] 2025-06-03 23:56:05,473 | INFO     | exeerrordiag: 
[2025-06-03 19:56:20] 2025-06-03 23:56:05,474 | INFO     | exitcode: 0
[2025-06-03 19:56:20] 2025-06-03 23:56:05,474 | INFO     | exitmsg: OK
[2025-06-03 19:56:20] 2025-06-03 23:56:05,474 | INFO     | cpuconsumptiontime: 39720 s
[2025-06-03 19:56:20] 2025-06-03 23:56:05,474 | INFO     | nevents: 400
[2025-06-03 19:56:20] 2025-06-03 23:56:05,474 | INFO     | neventsw: 0
[2025-06-03 19:56:20] 2025-06-03 23:56:05,474 | INFO     | pid: 20050
[2025-06-03 19:56:20] 2025-06-03 23:56:05,475 | INFO     | pgrp: 20050
[2025-06-03 19:56:20] 2025-06-03 23:56:05,475 | INFO     | corecount: 12
[2025-06-03 19:56:20] 2025-06-03 23:56:05,475 | INFO     | event service: False
[2025-06-03 19:56:20] 2025-06-03 23:56:05,475 | INFO     | sizes: {0: 2404356, 1: 2405212, 6: 2405418, 12: 2405446, 3748: 2431042, 3749: 2439983, 3752: 2440167, 3758: 2440337}
[2025-06-03 19:56:20] 2025-06-03 23:56:05,475 | INFO     | --------------------------------------------------
[2025-06-03 19:56:20] 2025-06-03 23:56:05,475 | INFO     | 
[2025-06-03 19:56:20] 2025-06-03 23:56:05,476 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 19:56:20] 2025-06-03 23:56:05,501 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,502 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,502 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:56:20] 2025-06-03 23:56:05,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,505 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:56:20] 2025-06-03 23:56:05,505 | INFO     | job 6677917726 has completed (purged errors)
[2025-06-03 19:56:20] 2025-06-03 23:56:05,505 | INFO     | overall cleanup function is called
[2025-06-03 19:56:20] 2025-06-03 23:56:06,513 | INFO     | --- collectZombieJob: --- 10, [20050]
[2025-06-03 19:56:20] 2025-06-03 23:56:06,513 | INFO     | zombie collector waiting for pid 20050
[2025-06-03 19:56:20] 2025-06-03 23:56:06,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:56:20] 2025-06-03 23:56:06,514 | INFO     | collected zombie processes
[2025-06-03 19:56:20] 2025-06-03 23:56:06,514 | INFO     | will attempt to kill all subprocesses of pid=20050
[2025-06-03 19:56:20] 2025-06-03 23:56:06,608 | INFO     | process IDs to be killed: [20050] (in reverse order)
[2025-06-03 19:56:20] 2025-06-03 23:56:06,662 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:56:20] 2025-06-03 23:56:06,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:56:20] 2025-06-03 23:56:06,666 | INFO     | did not find any defunct processes belonging to 20050
[2025-06-03 19:56:20] 2025-06-03 23:56:06,669 | INFO     | did not find any defunct processes belonging to 20050
[2025-06-03 19:56:20] 2025-06-03 23:56:06,669 | INFO     | ready for new job
[2025-06-03 19:56:20] 2025-06-03 23:56:06,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:56:20] 2025-06-03 23:56:06,670 | INFO     | **************************************
[2025-06-03 19:56:20] 2025-06-03 23:56:06,670 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:56:20] 2025-06-03 23:56:06,671 | INFO     | **************************************
[2025-06-03 19:56:20] 2025-06-03 23:56:06,671 | INFO     | 
[2025-06-03 19:56:20] 2025-06-03 23:56:06,671 | INFO     | architecture information:
[2025-06-03 19:56:20] 2025-06-03 23:56:06,672 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:56:20] 2025-06-03 23:56:06,687 | INFO     | cat /etc/os-release:
[2025-06-03 19:56:20] NAME="CentOS Linux"
[2025-06-03 19:56:20] VERSION="7 (Core)"
[2025-06-03 19:56:20] ID="centos"
[2025-06-03 19:56:20] ID_LIKE="rhel fedora"
[2025-06-03 19:56:20] VERSION_ID="7"
[2025-06-03 19:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:56:20] ANSI_COLOR="0;31"
[2025-06-03 19:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:56:20] HOME_URL="https://www.centos.org/"
[2025-06-03 19:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:56:20] 
[2025-06-03 19:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:56:20] 
[2025-06-03 19:56:20] 2025-06-03 23:56:06,687 | INFO     | **************************************
[2025-06-03 19:56:20] 2025-06-03 23:56:07,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 19:56:20] 2025-06-03 23:56:07,208 | INFO     | sufficient remaining disk space (29420945408 B)
[2025-06-03 19:56:20] 2025-06-03 23:56:07,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:56:20] 2025-06-03 23:56:07,209 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:56:20] 2025-06-03 23:56:07,210 | INFO     | update_server=False
[2025-06-03 19:56:20] 2025-06-03 23:56:07,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:56:20] 2025-06-03 23:56:07,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:56:20] 2025-06-03 23:56:07,345 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:56:20] 2025-06-03 23:56:07,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:56:20] 2025-06-03 23:56:07,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:56:20] 2025-06-03 23:56:07,391 | INFO     | all data control threads have been joined
[2025-06-03 19:56:20] 2025-06-03 23:56:07,683 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 19:56:20] 2025-06-03 23:56:07,683 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 19:56:20] 2025-06-03 23:56:07,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:56:20] 2025-06-03 23:56:07,684 | INFO     | will abort loop
[2025-06-03 19:56:20] 2025-06-03 23:56:07,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:56:20] 2025-06-03 23:56:08,215 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:08,215 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:08,343 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:08,397 | INFO     | [data] control thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:08,445 | INFO     | all payload control threads have been joined
[2025-06-03 19:56:20] 2025-06-03 23:56:08,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:08,602 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:08,644 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:08,689 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:08,769 | INFO     | all job control threads have been joined
[2025-06-03 19:56:20] 2025-06-03 23:56:08,820 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:09,451 | INFO     | [payload] control thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:09,471 | INFO     | [job] validate thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:09,601 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:09,639 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:09,744 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:09,774 | INFO     | [job] control thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:10,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:56:20] 2025-06-03 23:56:14,414 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:56:20] 2025-06-03 23:56:14,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251628566336)>', '<ExcThread(monitor, started 140251175560960)>']
[2025-06-03 19:56:20] 2025-06-03 23:56:15,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:56:20] 2025-06-03 23:56:15,386 | INFO     | [monitor] control thread has ended
[2025-06-03 19:56:20] 2025-06-03 23:56:19,942 | INFO     | all workflow threads have been joined
[2025-06-03 19:56:20] 2025-06-03 23:56:19,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:56:20] 2025-06-03 23:56:19,947 | INFO     | traces error code: 0
[2025-06-03 19:56:20] 2025-06-03 23:56:19,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:56:20] 2025-06-03 23:56:20,038 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:56:20] 2025-06-03 23:56:20,042 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:56:20] 2025-06-03 23:56:20,046 [wrapper] pilotpid: 13629
[2025-06-03 19:56:20] 2025-06-03 23:56:20,050 [wrapper] Pilot exit status: 0
[2025-06-03 19:56:20] 2025-06-03 23:56:20,065 [wrapper] pandaids: 6677917726
[2025-06-03 19:56:20] 2025-06-03 23:56:20,105 [wrapper] cleanup supervisor_pilot 18826 13630
[2025-06-03 19:56:20] 2025-06-03 23:56:20,108 [wrapper] Test setup, not cleaning
[2025-06-03 19:56:20] 2025-06-03 23:56:20,112 [wrapper] apfmon messages muted
[2025-06-03 19:56:20] 2025-06-03 23:56:20,116 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:56:20] 2025-06-03 23:56:20,120 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:56:20]  *** Error codes and diagnostics ***
[2025-06-03 19:56:20]     "exeErrorCode": 0,
[2025-06-03 19:56:20]     "exeErrorDiag": "",
[2025-06-03 19:56:20]     "pilotErrorCode": 0,
[2025-06-03 19:56:20]     "pilotErrorDiag": "",
[2025-06-03 19:56:20]  *** Listing of results directory ***
[2025-06-03 19:56:20] total 389948
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 13:56 queuedata.json
[2025-06-03 19:56:20] -rwx------ 1 boincer umatlas     37140 Jun  3 13:56 runpilot2-wrapper.sh
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas       100 Jun  3 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:56:20] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 18:52 run_atlas
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas       105 Jun  3 18:52 job.xml
[2025-06-03 19:56:20] -rw-r--r-- 2 boincer umatlas 216746842 Jun  3 18:52 EVNT.45006593._001651.pool.root.1
[2025-06-03 19:56:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:52 start_atlas.sh
[2025-06-03 19:56:20] drwxrwx--x 2 boincer umatlas      4096 Jun  3 18:52 shared
[2025-06-03 19:56:20] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 18:52 input.tar.gz
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas         0 Jun  3 18:52 boinc_lockfile
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 18:52 pandaJob.out
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas    986861 Jun  3 18:53 agis_schedconf.cvmfs.json
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas   1603667 Jun  3 18:53 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:56:20] drwx------ 4 boincer umatlas      4096 Jun  3 18:53 pilot3
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas 177272859 Jun  3 19:55 HITS.45006595._041234.pool.root.1
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas      5868 Jun  3 19:55 init_data.xml
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas       529 Jun  3 19:55 boinc_task_state.xml
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas      1049 Jun  3 19:55 memory_monitor_summary.json
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 19:55 boinc_mmap_file
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas    355012 Jun  3 19:55 log.45006595._041234.job.log.tgz.1
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas        27 Jun  3 19:55 wrapper_checkpoint.txt
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas        95 Jun  3 19:55 pilot_heartbeat.json
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas      7753 Jun  3 19:56 heartbeat.json
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas      4539 Jun  3 19:56 pilotlog.txt
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas    372576 Jun  3 19:56 log.45006595._041234.job.log.1
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas       357 Jun  3 19:56 output.list
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas       620 Jun  3 19:56 runtime_log
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas    747520 Jun  3 19:56 result.tar.gz
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 19:56 runtime_log.err
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas       659 Jun  3 19:56 qL6MDmM3kg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCVZKDmXomzam.diag
[2025-06-03 19:56:20] -rw-r--r-- 1 boincer umatlas     21571 Jun  3 19:56 stderr.txt
[2025-06-03 19:56:20] HITS file was successfully produced:
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas 177272859 Jun  3 19:55 shared/HITS.pool.root.1
[2025-06-03 19:56:20]  *** Contents of shared directory: ***
[2025-06-03 19:56:20] total 386040
[2025-06-03 19:56:20] -rw-r--r-- 2 boincer umatlas 216746842 Jun  3 18:52 ATLAS.root_0
[2025-06-03 19:56:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:52 start_atlas.sh
[2025-06-03 19:56:20] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 18:52 input.tar.gz
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas 177272859 Jun  3 19:55 HITS.pool.root.1
[2025-06-03 19:56:20] -rw------- 1 boincer umatlas    747520 Jun  3 19:56 result.tar.gz
19:56:21 (9985): run_atlas exited; CPU time 39646.500984
19:56:21 (9985): called boinc_finish(0)

</stderr_txt>
]]>

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