Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:06:10 (20364): wrapper (7.7.26015): starting
18:06:10 (20364): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:06:10] Arguments: --nthreads 8
[2025-06-04 18:06:10] Threads: 8
[2025-06-04 18:06:10] Checking for CVMFS
[2025-06-04 18:06:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:06:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:06:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:06:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:06:13] 2.11.2.0 3391 33425 94136 146786 0 207 15400313 25165825 3132 130560 0 17945839 99.819 19656444 2015 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:06:13] CVMFS is ok
[2025-06-04 18:06:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:06:13] Checking for apptainer binary...
[2025-06-04 18:06:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:06:13] Running /usr/bin/apptainer --version
[2025-06-04 18:06:13] apptainer version 1.3.2-1.el7
[2025-06-04 18:06:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:17:13] cg-vwn306.simple-grid.lan
[2025-06-05 01:17:13] apptainer works
[2025-06-05 01:17:13] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:17:13] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:17:13] Starting ATLAS job with PandaID=6677621594
[2025-06-05 01:17:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:23:49]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:23:49] 2025-06-05 03:05:53,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:23:49] 2025-06-05 03:05:53,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:23:49] 2025-06-05 03:05:53,344 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:23:49] 2025-06-05 03:05:53,345 | INFO     | sum of square deviations: 2954447953.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,347 | INFO     | sum of deviations: 50780225980.999954
[2025-06-05 05:23:49] 2025-06-05 03:05:53,347 | INFO     | mean x: 1749086191.5
[2025-06-05 05:23:49] 2025-06-05 03:05:53,347 | INFO     | mean y: 2443628.5849056602
[2025-06-05 05:23:49] 2025-06-05 03:05:53,347 | INFO     | -- intersect: -30060361158.491524
[2025-06-05 05:23:49] 2025-06-05 03:05:53,347 | INFO     | intersect: -30060361158.491524
[2025-06-05 05:23:49] 2025-06-05 03:05:53,348 | INFO     | chi2: 7.238950981321712
[2025-06-05 05:23:49] 2025-06-05 03:05:53,348 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,350 | INFO     | sum of deviations: 63642394645.000046
[2025-06-05 05:23:49] 2025-06-05 03:05:53,350 | INFO     | mean x: 1749086039.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,350 | INFO     | mean y: 2453037.743961353
[2025-06-05 05:23:49] 2025-06-05 03:05:53,350 | INFO     | -- intersect: -40471755112.845695
[2025-06-05 05:23:49] 2025-06-05 03:05:53,350 | INFO     | intersect: -40471755112.845695
[2025-06-05 05:23:49] 2025-06-05 03:05:53,351 | INFO     | chi2: 6.5478942570169485
[2025-06-05 05:23:49] 2025-06-05 03:05:53,351 | INFO     | current chi2=6.5478942570169485 (change=9.546365572689483 %)
[2025-06-05 05:23:49] 2025-06-05 03:05:53,351 | INFO     | right removable region: 206
[2025-06-05 05:23:49] 2025-06-05 03:05:53,351 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,353 | INFO     | sum of deviations: -22581063265.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,353 | INFO     | mean x: 1749086344.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,353 | INFO     | mean y: 2498377.806763285
[2025-06-05 05:23:49] 2025-06-05 03:05:53,353 | INFO     | -- intersect: 14363221592.561277
[2025-06-05 05:23:49] 2025-06-05 03:05:53,354 | INFO     | intersect: 14363221592.561277
[2025-06-05 05:23:49] 2025-06-05 03:05:53,354 | INFO     | chi2: 2.3193613826995167
[2025-06-05 05:23:49] 2025-06-05 03:05:53,354 | INFO     | current chi2=2.3193613826995167 (change=67.95997944061172 %)
[2025-06-05 05:23:49] 2025-06-05 03:05:53,355 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 05:23:49] 2025-06-05 03:05:53,356 | INFO     | sum of deviations: -56818857205.5
[2025-06-05 05:23:49] 2025-06-05 03:05:53,356 | INFO     | mean x: 1749086496.5
[2025-06-05 05:23:49] 2025-06-05 03:05:53,356 | INFO     | mean y: 2525022.9455445544
[2025-06-05 05:23:49] 2025-06-05 03:05:53,357 | INFO     | -- intersect: 38887506166.36716
[2025-06-05 05:23:49] 2025-06-05 03:05:53,357 | INFO     | intersect: 38887506166.36716
[2025-06-05 05:23:49] 2025-06-05 03:05:53,357 | INFO     | chi2: 0.9891193034590899
[2025-06-05 05:23:49] 2025-06-05 03:05:53,357 | INFO     | current chi2=0.9891193034590899 (change=57.3538082147488 %)
[2025-06-05 05:23:49] 2025-06-05 03:05:53,358 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,359 | INFO     | sum of deviations: -54857856930.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,359 | INFO     | mean x: 1749086649.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,359 | INFO     | mean y: 2523361.7157360404
[2025-06-05 05:23:49] 2025-06-05 03:05:53,359 | INFO     | -- intersect: 40477280407.01488
[2025-06-05 05:23:49] 2025-06-05 03:05:53,359 | INFO     | intersect: 40477280407.01488
[2025-06-05 05:23:49] 2025-06-05 03:05:53,360 | INFO     | chi2: 0.9725893559584143
[2025-06-05 05:23:49] 2025-06-05 03:05:53,360 | INFO     | current chi2=0.9725893559584143 (change=1.671178334389799 %)
[2025-06-05 05:23:49] 2025-06-05 03:05:53,360 | INFO     | left removable region: 30
[2025-06-05 05:23:49] 2025-06-05 03:05:53,360 | INFO     | sum of square deviations: 1690450300.0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,362 | INFO     | sum of deviations: -21204082876.000004
[2025-06-05 05:23:49] 2025-06-05 03:05:53,362 | INFO     | mean x: 1749086923.5
[2025-06-05 05:23:49] 2025-06-05 03:05:53,362 | INFO     | mean y: 2517174.2386363638
[2025-06-05 05:23:49] 2025-06-05 03:05:53,362 | INFO     | -- intersect: 21942105746.125004
[2025-06-05 05:23:49] 2025-06-05 03:05:53,362 | INFO     | intersect: 21942105746.125004
[2025-06-05 05:23:49] 2025-06-05 03:05:53,362 | INFO     | chi2: 0.14169321886322492
[2025-06-05 05:23:49] 2025-06-05 03:05:53,363 | INFO     | -- intersect: 21942105746.125004
[2025-06-05 05:23:49] 2025-06-05 03:05:53,363 | INFO     | current memory leak: -12.54 B/s (using 176 data points, chi2=0.14)
[2025-06-05 05:23:49] 2025-06-05 03:05:53,364 | INFO     | ..............................
[2025-06-05 05:23:49] 2025-06-05 03:05:53,364 | INFO     | . Timing measurements:
[2025-06-05 05:23:49] 2025-06-05 03:05:53,364 | INFO     | . get job = 0 s
[2025-06-05 05:23:49] 2025-06-05 03:05:53,364 | INFO     | . initial setup = 5 s
[2025-06-05 05:23:49] 2025-06-05 03:05:53,364 | INFO     | . payload setup = 178 s
[2025-06-05 05:23:49] 2025-06-05 03:05:53,364 | INFO     | . stage-in = 0 s
[2025-06-05 05:23:49] 2025-06-05 03:05:53,364 | INFO     | . payload execution = 13052 s
[2025-06-05 05:23:49] 2025-06-05 03:05:53,364 | INFO     | . stage-out = 4 s
[2025-06-05 05:23:49] 2025-06-05 03:05:53,364 | INFO     | . log creation = 1 s
[2025-06-05 05:23:49] 2025-06-05 03:05:53,365 | INFO     | ..............................
[2025-06-05 05:23:49] 2025-06-05 03:05:53,544 | INFO     | 
[2025-06-05 05:23:49] 2025-06-05 03:05:53,544 | INFO     | job summary report
[2025-06-05 05:23:49] 2025-06-05 03:05:53,545 | INFO     | --------------------------------------------------
[2025-06-05 05:23:49] 2025-06-05 03:05:53,545 | INFO     | PanDA job id: 6677621594
[2025-06-05 05:23:49] 2025-06-05 03:05:53,545 | INFO     | task id: 45006595
[2025-06-05 05:23:49] 2025-06-05 03:05:53,545 | INFO     | errors: (none)
[2025-06-05 05:23:49] 2025-06-05 03:05:53,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:23:49] 2025-06-05 03:05:53,545 | INFO     | pilot state: finished 
[2025-06-05 05:23:49] 2025-06-05 03:05:53,545 | INFO     | transexitcode: 0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,545 | INFO     | exeerrorcode: 0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,546 | INFO     | exeerrordiag: 
[2025-06-05 05:23:49] 2025-06-05 03:05:53,546 | INFO     | exitcode: 0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,546 | INFO     | exitmsg: OK
[2025-06-05 05:23:49] 2025-06-05 03:05:53,546 | INFO     | cpuconsumptiontime: 48544 s
[2025-06-05 05:23:49] 2025-06-05 03:05:53,546 | INFO     | nevents: 400
[2025-06-05 05:23:49] 2025-06-05 03:05:53,546 | INFO     | neventsw: 0
[2025-06-05 05:23:49] 2025-06-05 03:05:53,546 | INFO     | pid: 22934
[2025-06-05 05:23:49] 2025-06-05 03:05:53,546 | INFO     | pgrp: 22934
[2025-06-05 05:23:49] 2025-06-05 03:05:53,546 | INFO     | corecount: 8
[2025-06-05 05:23:49] 2025-06-05 03:05:53,547 | INFO     | event service: False
[2025-06-05 05:23:49] 2025-06-05 03:05:53,547 | INFO     | sizes: {0: 2397171, 1: 2397199, 2: 2397370, 12: 2397398, 23: 2397426, 34: 2397454, 44: 2397610, 55: 2397638, 66: 2397666, 77: 2397694, 87: 2397750, 89: 2398264, 98
[2025-06-05 05:23:49] 2025-06-05 03:05:53,547 | INFO     | --------------------------------------------------
[2025-06-05 05:23:49] 2025-06-05 03:05:53,547 | INFO     | 
[2025-06-05 05:23:49] 2025-06-05 03:05:53,547 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-05 05:23:49] 2025-06-05 03:05:53,825 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,827 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:23:49] 2025-06-05 03:05:53,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:23:49] 2025-06-05 03:05:53,828 | INFO     | job 6677621594 has completed (purged errors)
[2025-06-05 05:23:49] 2025-06-05 03:05:53,828 | INFO     | overall cleanup function is called
[2025-06-05 05:23:49] 2025-06-05 03:05:54,837 | INFO     | --- collectZombieJob: --- 10, [22934]
[2025-06-05 05:23:49] 2025-06-05 03:05:54,837 | INFO     | zombie collector waiting for pid 22934
[2025-06-05 05:23:49] 2025-06-05 03:05:54,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:23:49] 2025-06-05 03:05:54,838 | INFO     | collected zombie processes
[2025-06-05 05:23:49] 2025-06-05 03:05:54,838 | INFO     | will attempt to kill all subprocesses of pid=22934
[2025-06-05 05:23:49] 2025-06-05 03:05:54,947 | INFO     | process IDs to be killed: [22934] (in reverse order)
[2025-06-05 05:23:49] 2025-06-05 03:05:55,378 | INFO     | PID=16313 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 05:23:49] 2025-06-05 03:05:55,379 | INFO     | .. there are 9 such processes running
[2025-06-05 05:23:49] 2025-06-05 03:05:56,038 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:23:49] 2025-06-05 03:05:56,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:23:49] 2025-06-05 03:05:56,042 | INFO     | did not find any defunct processes belonging to 22934
[2025-06-05 05:23:49] 2025-06-05 03:05:56,045 | INFO     | did not find any defunct processes belonging to 22934
[2025-06-05 05:23:49] 2025-06-05 03:05:56,045 | INFO     | ready for new job
[2025-06-05 05:23:49] 2025-06-05 03:05:56,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:23:49] 2025-06-05 03:05:56,047 | INFO     | **************************************
[2025-06-05 05:23:49] 2025-06-05 03:05:56,047 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:23:49] 2025-06-05 03:05:56,047 | INFO     | **************************************
[2025-06-05 05:23:49] 2025-06-05 03:05:56,048 | INFO     | 
[2025-06-05 05:23:49] 2025-06-05 03:05:56,048 | INFO     | pilot is running in a VM
[2025-06-05 05:23:49] 2025-06-05 03:05:56,048 | INFO     | architecture information:
[2025-06-05 05:23:49] 2025-06-05 03:05:56,058 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:23:49] 2025-06-05 03:05:56,255 | INFO     | cat /etc/os-release:
[2025-06-05 05:23:49] NAME="CentOS Linux"
[2025-06-05 05:23:49] VERSION="7 (Core)"
[2025-06-05 05:23:49] ID="centos"
[2025-06-05 05:23:49] ID_LIKE="rhel fedora"
[2025-06-05 05:23:49] VERSION_ID="7"
[2025-06-05 05:23:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:23:49] ANSI_COLOR="0;31"
[2025-06-05 05:23:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:23:49] HOME_URL="https://www.centos.org/"
[2025-06-05 05:23:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:23:49] 
[2025-06-05 05:23:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:23:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:23:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:23:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:23:49] 
[2025-06-05 05:23:49] 2025-06-05 03:05:56,255 | INFO     | **************************************
[2025-06-05 05:23:49] 2025-06-05 03:05:56,758 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-05 05:23:49] 2025-06-05 03:05:56,947 | INFO     | sufficient remaining disk space (497130930176 B)
[2025-06-05 05:23:49] 2025-06-05 03:05:56,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:23:49] 2025-06-05 03:05:56,947 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:23:49] 2025-06-05 03:05:56,947 | INFO     | update_server=False
[2025-06-05 05:23:49] 2025-06-05 03:05:56,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:23:49] 2025-06-05 03:05:57,012 | INFO     | all job control threads have been joined
[2025-06-05 05:23:49] 2025-06-05 03:05:57,019 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 05:23:49] 2025-06-05 03:05:57,019 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 05:23:49] 2025-06-05 03:05:57,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:23:49] 2025-06-05 03:05:57,020 | INFO     | will abort loop
[2025-06-05 05:23:49] 2025-06-05 03:05:57,087 | INFO     | all data control threads have been joined
[2025-06-05 05:23:49] 2025-06-05 03:05:57,385 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:23:49] 2025-06-05 03:05:57,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:23:49] 2025-06-05 03:05:57,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:23:49] 2025-06-05 03:05:57,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:23:49] 2025-06-05 03:05:57,952 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:58,007 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:58,016 | INFO     | all payload control threads have been joined
[2025-06-05 05:23:49] 2025-06-05 03:05:58,017 | INFO     | [job] control thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:58,025 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:58,094 | INFO     | [data] control thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:58,248 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:58,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:23:49] 2025-06-05 03:05:58,532 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:58,559 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:58,655 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:58,989 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:59,022 | INFO     | [payload] control thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:59,242 | INFO     | [job] validate thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:59,343 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:23:49] 2025-06-05 03:05:59,404 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:59,518 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:05:59,671 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:06:03,352 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:23:49] 2025-06-05 03:06:05,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952876001088)>', '<ExcThread(monitor, started 139952440469248)>']
[2025-06-05 05:23:49] 2025-06-05 03:06:05,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:23:49] 2025-06-05 03:06:05,434 | INFO     | [monitor] control thread has ended
[2025-06-05 05:23:49] 2025-06-05 03:06:10,412 | INFO     | all workflow threads have been joined
[2025-06-05 05:23:49] 2025-06-05 03:06:10,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:23:49] 2025-06-05 03:06:10,413 | INFO     | traces error code: 0
[2025-06-05 05:23:49] 2025-06-05 03:06:10,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:23:49] 2025-06-05 03:06:10,786 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:23:49] 2025-06-05 03:06:10,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:23:49] 2025-06-05 03:06:10,957 [wrapper] pilotpid: 16313
[2025-06-05 05:23:49] 2025-06-05 03:06:11,053 [wrapper] Pilot exit status: 0
[2025-06-05 05:23:49] 2025-06-05 03:06:11,374 [wrapper] pandaids: 6677621594
[2025-06-05 05:23:49] 2025-06-05 03:06:11,871 [wrapper] cleanup supervisor_pilot 23119 16314
[2025-06-05 05:23:49] 2025-06-05 03:06:11,987 [wrapper] Test setup, not cleaning
[2025-06-05 05:23:49] 2025-06-05 03:06:12,052 [wrapper] apfmon messages muted
[2025-06-05 05:23:49] 2025-06-05 03:06:12,095 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:23:49] 2025-06-05 03:06:12,190 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:23:49]  *** Error codes and diagnostics ***
[2025-06-05 05:23:49]     "exeErrorCode": 0,
[2025-06-05 05:23:49]     "exeErrorDiag": "",
[2025-06-05 05:23:49]     "pilotErrorCode": 0,
[2025-06-05 05:23:49]     "pilotErrorDiag": "",
[2025-06-05 05:23:49]  *** Listing of results directory ***
[2025-06-05 05:23:49] total 385488
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:59 pilot3.tar.gz
[2025-06-05 05:23:49] -rwx------. 1 boinc boinc     37140 Jun  3 15:20 runpilot2-wrapper.sh
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:20 queuedata.json
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:23:49] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:06 run_atlas
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:06 job.xml
[2025-06-05 05:23:49] -rw-r--r--. 2 boinc boinc 215891008 Jun  4 18:06 EVNT.45006593._001356.pool.root.1
[2025-06-05 05:23:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:06 start_atlas.sh
[2025-06-05 05:23:49] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:06 shared
[2025-06-05 05:23:49] -rw-r--r--. 2 boinc boinc    508878 Jun  4 18:06 input.tar.gz
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc      6391 Jun  4 18:06 init_data.xml
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:06 boinc_lockfile
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc      2525 Jun  5 01:17 pandaJob.out
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc    987117 Jun  5 01:20 agis_schedconf.cvmfs.json
[2025-06-05 05:23:49] drwx------. 4 boinc boinc      4096 Jun  5 01:20 pilot3
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc 171975465 Jun  5 05:03 HITS.45006595._033700.pool.root.1
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc       531 Jun  5 05:03 boinc_task_state.xml
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc      1012 Jun  5 05:04 memory_monitor_summary.json
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc   1598969 Jun  5 05:04 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc    374389 Jun  5 05:04 log.45006595._033700.job.log.tgz.1
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc        95 Jun  5 05:04 pilot_heartbeat.json
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc      7692 Jun  5 05:05 heartbeat.json
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc      4602 Jun  5 05:06 pilotlog.txt
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc   1151598 Jun  5 05:06 log.45006595._033700.job.log.1
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc       357 Jun  5 05:06 output.list
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:06 runtime_log
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc   1546240 Jun  5 05:06 result.tar.gz
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc       657 Jun  5 05:06 wriLDm8jgg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGhYKDm4zFIWm.diag
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc      8659 Jun  5 05:06 runtime_log.err
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc      8192 Jun  5 05:23 boinc_mmap_file
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc        28 Jun  5 05:23 wrapper_checkpoint.txt
[2025-06-05 05:23:49] -rw-r--r--. 1 boinc boinc     20614 Jun  5 05:23 stderr.txt
[2025-06-05 05:23:49] HITS file was successfully produced:
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc 171975465 Jun  5 05:03 shared/HITS.pool.root.1
[2025-06-05 05:23:49]  *** Contents of shared directory: ***
[2025-06-05 05:23:49] total 380808
[2025-06-05 05:23:49] -rw-r--r--. 2 boinc boinc 215891008 Jun  4 18:06 ATLAS.root_0
[2025-06-05 05:23:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:06 start_atlas.sh
[2025-06-05 05:23:49] -rw-r--r--. 2 boinc boinc    508878 Jun  4 18:06 input.tar.gz
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc 171975465 Jun  5 05:03 HITS.pool.root.1
[2025-06-05 05:23:49] -rw-------. 1 boinc boinc   1546240 Jun  5 05:06 result.tar.gz
05:23:51 (20364): run_atlas exited; CPU time 48733.019286
05:23:51 (20364): called boinc_finish(0)

</stderr_txt>
]]>

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