Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
05:01:53 (508184): wrapper (7.7.26015): starting
05:01:53 (508184): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:01:53] Arguments: --nthreads 8
[2025-06-04 05:01:53] Threads: 8
[2025-06-04 05:01:53] Checking for CVMFS
[2025-06-04 05:01:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:01:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:01:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:01:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:01:53] 2.12.7.0 20002 1818 62544 146768 1 56 3890595 4096000 0 130560 0 1345830 99.990 468068 8853 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 05:01:53] CVMFS is ok
[2025-06-04 05:01:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:01:53] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 05:01:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 05:01:53] Further information can be found at the LHC@home message board.
[2025-06-04 05:01:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:01:53] Checking for apptainer binary...
[2025-06-04 05:01:53] apptainer is not installed, using version from CVMFS
[2025-06-04 05:01:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:01:54] vm-zhiwei-ec8ce3
[2025-06-04 05:01:54] apptainer works
[2025-06-04 05:01:54] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:01:54] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:01:54] Starting ATLAS job with PandaID=6677976189
[2025-06-04 05:01:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:43:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:43:25]  protocol_id=None
[2025-06-04 06:43:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 06:43:25]  replicas=None
[2025-06-04 06:43:25]  scope=mc23_13p6TeV
[2025-06-04 06:43:25]  status=None
[2025-06-04 06:43:25]  status_code=0
[2025-06-04 06:43:25]  storage_token=
[2025-06-04 06:43:25]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6677976189/log.45006595._043164.job.log.tgz.1
[2025-06-04 06:43:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/7b/log.45006595._043164.job.log.tgz.1
[2025-06-04 06:43:25]  workdir=None
[2025-06-04 06:43:25] ]
[2025-06-04 06:43:25] 2025-06-04 06:42:51,830 | INFO     | transferring file log.45006595._043164.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6677976189/log.45006595._043164.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 06:43:25] 2025-06-04 06:42:51,830 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6677976189/log.45006595._043164.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._043164.job
[2025-06-04 06:43:25] 2025-06-04 06:42:51,868 | INFO     | adding to output.list: log.45006595._043164.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/7b/log.45006595._043164.job.log.tg
[2025-06-04 06:43:25] 2025-06-04 06:42:51,869 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 06:43:25] 2025-06-04 06:42:51,869 | INFO     | summary of transferred files:
[2025-06-04 06:43:25] 2025-06-04 06:42:51,869 | INFO     |  -- lfn=log.45006595._043164.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 06:43:25] 2025-06-04 06:42:51,869 | INFO     | stage-out finished correctly
[2025-06-04 06:43:25] 2025-06-04 06:42:52,833 | INFO     | monitor loop #444: job 0:6677976189 is in state 'finished'
[2025-06-04 06:43:25] 2025-06-04 06:42:52,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:43:25] 2025-06-04 06:42:54,521 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 06:43:25] 2025-06-04 06:42:54,634 | INFO     | job 6677976189 has state=finished
[2025-06-04 06:43:25] 2025-06-04 06:42:54,634 | INFO     | preparing for final server update for job 6677976189 in state='finished'
[2025-06-04 06:43:25] 2025-06-04 06:42:54,635 | INFO     | this job has now completed (state=finished)
[2025-06-04 06:43:25] 2025-06-04 06:42:54,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:43:25] 2025-06-04 06:42:54,636 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:43:25] 2025-06-04 06:42:54,636 | INFO     | job 6677976189 has finished - writing final server update
[2025-06-04 06:43:25] 2025-06-04 06:42:54,636 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:43:25] 2025-06-04 06:42:54,641 | INFO     | executing command: lscpu
[2025-06-04 06:43:25] 2025-06-04 06:42:54,675 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:43:25] 2025-06-04 06:42:54,752 | INFO     | PID=511854 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 06:43:25] 2025-06-04 06:42:55,338 | INFO     | monitor loop #445: job 0:6677976189 is in state 'finished'
[2025-06-04 06:43:25] 2025-06-04 06:42:55,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:43:25] 2025-06-04 06:42:57,841 | INFO     | monitor loop #446: job 0:6677976189 is in state 'finished'
[2025-06-04 06:43:25] 2025-06-04 06:42:57,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:43:25] 2025-06-04 06:43:00,343 | INFO     | monitor loop #447: job 0:6677976189 is in state 'finished'
[2025-06-04 06:43:25] 2025-06-04 06:43:00,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:43:25] 2025-06-04 06:43:02,846 | INFO     | monitor loop #448: job 0:6677976189 is in state 'finished'
[2025-06-04 06:43:25] 2025-06-04 06:43:02,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:43:25] 2025-06-04 06:43:04,130 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 06:43:25] 2025-06-04 06:43:04,131 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6677976189/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:43:25] 2025-06-04 06:43:04,133 | INFO     | extracted standard info from prmon json
[2025-06-04 06:43:25] 2025-06-04 06:43:04,133 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:43:25] 2025-06-04 06:43:04,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:43:25] 2025-06-04 06:43:04,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:43:25] 2025-06-04 06:43:04,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:43:25] 2025-06-04 06:43:04,139 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:43:25] 2025-06-04 06:43:04,140 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 06:43:25] 2025-06-04 06:43:04,141 | INFO     | sum of deviations: -6263879397.500001
[2025-06-04 06:43:25] 2025-06-04 06:43:04,141 | INFO     | mean x: 1749016449.5
[2025-06-04 06:43:25] 2025-06-04 06:43:04,141 | INFO     | mean y: 2560642.1195652173
[2025-06-04 06:43:25] 2025-06-04 06:43:04,142 | INFO     | -- intersect: 45380700491.796814
[2025-06-04 06:43:25] 2025-06-04 06:43:04,142 | INFO     | intersect: 45380700491.796814
[2025-06-04 06:43:25] 2025-06-04 06:43:04,143 | INFO     | chi2: 0.1050319399395579
[2025-06-04 06:43:25] 2025-06-04 06:43:04,143 | INFO     | -- intersect: 45380700491.796814
[2025-06-04 06:43:25] 2025-06-04 06:43:04,143 | INFO     | current memory leak: -25.94 B/s (using 92 data points, chi2=0.11)
[2025-06-04 06:43:25] 2025-06-04 06:43:04,145 | INFO     | ..............................
[2025-06-04 06:43:25] 2025-06-04 06:43:04,145 | INFO     | . Timing measurements:
[2025-06-04 06:43:25] 2025-06-04 06:43:04,145 | INFO     | . get job = 0 s
[2025-06-04 06:43:25] 2025-06-04 06:43:04,145 | INFO     | . initial setup = 3 s
[2025-06-04 06:43:25] 2025-06-04 06:43:04,146 | INFO     | . payload setup = 12 s
[2025-06-04 06:43:25] 2025-06-04 06:43:04,146 | INFO     | . stage-in = 0 s
[2025-06-04 06:43:25] 2025-06-04 06:43:04,146 | INFO     | . payload execution = 6002 s
[2025-06-04 06:43:25] 2025-06-04 06:43:04,147 | INFO     | . stage-out = 0 s
[2025-06-04 06:43:25] 2025-06-04 06:43:04,147 | INFO     | . log creation = 0 s
[2025-06-04 06:43:25] 2025-06-04 06:43:04,147 | INFO     | ..............................
[2025-06-04 06:43:25] 2025-06-04 06:43:04,710 | INFO     | 
[2025-06-04 06:43:25] 2025-06-04 06:43:04,711 | INFO     | job summary report
[2025-06-04 06:43:25] 2025-06-04 06:43:04,711 | INFO     | --------------------------------------------------
[2025-06-04 06:43:25] 2025-06-04 06:43:04,711 | INFO     | PanDA job id: 6677976189
[2025-06-04 06:43:25] 2025-06-04 06:43:04,712 | INFO     | task id: 45006595
[2025-06-04 06:43:25] 2025-06-04 06:43:04,712 | INFO     | errors: (none)
[2025-06-04 06:43:25] 2025-06-04 06:43:04,712 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:43:25] 2025-06-04 06:43:04,713 | INFO     | pilot state: finished 
[2025-06-04 06:43:25] 2025-06-04 06:43:04,713 | INFO     | transexitcode: 0
[2025-06-04 06:43:25] 2025-06-04 06:43:04,713 | INFO     | exeerrorcode: 0
[2025-06-04 06:43:25] 2025-06-04 06:43:04,714 | INFO     | exeerrordiag: 
[2025-06-04 06:43:25] 2025-06-04 06:43:04,714 | INFO     | exitcode: 0
[2025-06-04 06:43:25] 2025-06-04 06:43:04,714 | INFO     | exitmsg: OK
[2025-06-04 06:43:25] 2025-06-04 06:43:04,714 | INFO     | cpuconsumptiontime: 44652 s
[2025-06-04 06:43:25] 2025-06-04 06:43:04,715 | INFO     | nevents: 400
[2025-06-04 06:43:25] 2025-06-04 06:43:04,715 | INFO     | neventsw: 0
[2025-06-04 06:43:25] 2025-06-04 06:43:04,715 | INFO     | pid: 518384
[2025-06-04 06:43:25] 2025-06-04 06:43:04,716 | INFO     | pgrp: 518384
[2025-06-04 06:43:25] 2025-06-04 06:43:04,716 | INFO     | corecount: 8
[2025-06-04 06:43:25] 2025-06-04 06:43:04,716 | INFO     | event service: False
[2025-06-04 06:43:25] 2025-06-04 06:43:04,717 | INFO     | sizes: {0: 2405013, 1: 2405212, 9: 2405418, 12: 2405446, 6018: 2431996, 6019: 2440937, 6022: 2441121, 6031: 2441291}
[2025-06-04 06:43:25] 2025-06-04 06:43:04,717 | INFO     | --------------------------------------------------
[2025-06-04 06:43:25] 2025-06-04 06:43:04,717 | INFO     | 
[2025-06-04 06:43:25] 2025-06-04 06:43:04,718 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 06:43:25] 2025-06-04 06:43:04,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,767 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:43:25] 2025-06-04 06:43:04,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:43:25] 2025-06-04 06:43:04,773 | INFO     | job 6677976189 has completed (purged errors)
[2025-06-04 06:43:25] 2025-06-04 06:43:04,773 | INFO     | overall cleanup function is called
[2025-06-04 06:43:25] 2025-06-04 06:43:05,792 | INFO     | --- collectZombieJob: --- 10, [518384]
[2025-06-04 06:43:25] 2025-06-04 06:43:05,793 | INFO     | zombie collector waiting for pid 518384
[2025-06-04 06:43:25] 2025-06-04 06:43:05,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:43:25] 2025-06-04 06:43:05,793 | INFO     | collected zombie processes
[2025-06-04 06:43:25] 2025-06-04 06:43:05,793 | INFO     | will attempt to kill all subprocesses of pid=518384
[2025-06-04 06:43:25] 2025-06-04 06:43:05,853 | INFO     | process IDs to be killed: [518384] (in reverse order)
[2025-06-04 06:43:25] 2025-06-04 06:43:05,922 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:43:25] 2025-06-04 06:43:05,922 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:43:25] 2025-06-04 06:43:05,925 | INFO     | did not find any defunct processes belonging to 518384
[2025-06-04 06:43:25] 2025-06-04 06:43:05,927 | INFO     | did not find any defunct processes belonging to 518384
[2025-06-04 06:43:25] 2025-06-04 06:43:05,928 | INFO     | ready for new job
[2025-06-04 06:43:25] 2025-06-04 06:43:05,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:43:25] 2025-06-04 06:43:05,931 | INFO     | **************************************
[2025-06-04 06:43:25] 2025-06-04 06:43:05,931 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:43:25] 2025-06-04 06:43:05,931 | INFO     | **************************************
[2025-06-04 06:43:25] 2025-06-04 06:43:05,932 | INFO     | 
[2025-06-04 06:43:25] 2025-06-04 06:43:05,932 | INFO     | pilot is running in a VM
[2025-06-04 06:43:25] 2025-06-04 06:43:05,932 | INFO     | architecture information:
[2025-06-04 06:43:25] 2025-06-04 06:43:05,933 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:43:25] 2025-06-04 06:43:05,950 | INFO     | cat /etc/os-release:
[2025-06-04 06:43:25] NAME="CentOS Linux"
[2025-06-04 06:43:25] VERSION="7 (Core)"
[2025-06-04 06:43:25] ID="centos"
[2025-06-04 06:43:25] ID_LIKE="rhel fedora"
[2025-06-04 06:43:25] VERSION_ID="7"
[2025-06-04 06:43:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:43:25] ANSI_COLOR="0;31"
[2025-06-04 06:43:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:43:25] HOME_URL="https://www.centos.org/"
[2025-06-04 06:43:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:43:25] 
[2025-06-04 06:43:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:43:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:43:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:43:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:43:25] 
[2025-06-04 06:43:25] 2025-06-04 06:43:05,950 | INFO     | **************************************
[2025-06-04 06:43:25] 2025-06-04 06:43:06,454 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 06:43:25] 2025-06-04 06:43:06,481 | INFO     | sufficient remaining disk space (30380392448 B)
[2025-06-04 06:43:25] 2025-06-04 06:43:06,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:43:25] 2025-06-04 06:43:06,482 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:43:25] 2025-06-04 06:43:06,483 | INFO     | update_server=False
[2025-06-04 06:43:25] 2025-06-04 06:43:06,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:43:25] 2025-06-04 06:43:06,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:43:25] 2025-06-04 06:43:06,484 | INFO     | aborting loop
[2025-06-04 06:43:25] 2025-06-04 06:43:06,782 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:43:25] 2025-06-04 06:43:06,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:43:25] 2025-06-04 06:43:06,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:43:25] 2025-06-04 06:43:07,064 | INFO     | all data control threads have been joined
[2025-06-04 06:43:25] 2025-06-04 06:43:07,414 | INFO     | all payload control threads have been joined
[2025-06-04 06:43:25] 2025-06-04 06:43:07,444 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:43:25] 2025-06-04 06:43:07,489 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:07,490 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:07,674 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:07,854 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:08,070 | INFO     | [data] control thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:08,090 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:08,143 | INFO     | all job control threads have been joined
[2025-06-04 06:43:25] 2025-06-04 06:43:08,158 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:08,421 | INFO     | [payload] control thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:08,501 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:08,694 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:08,776 | INFO     | [job] validate thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:09,149 | INFO     | [job] control thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:09,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:43:25] 2025-06-04 06:43:09,450 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:09,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:43:25] 2025-06-04 06:43:10,273 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:13,653 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:17,267 | INFO     | job.realtimelogging is not enabled
[2025-06-04 06:43:25] 2025-06-04 06:43:18,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:43:25] 2025-06-04 06:43:19,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829753595712)>', '<ExcThread(monitor, started 139828918195968)>']
[2025-06-04 06:43:25] 2025-06-04 06:43:19,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:43:25] 2025-06-04 06:43:19,851 | INFO     | [monitor] control thread has ended
[2025-06-04 06:43:25] 2025-06-04 06:43:24,661 | INFO     | all workflow threads have been joined
[2025-06-04 06:43:25] 2025-06-04 06:43:24,663 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:43:25] 2025-06-04 06:43:24,663 | INFO     | traces error code: 0
[2025-06-04 06:43:25] 2025-06-04 06:43:24,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:43:25] 2025-06-04 06:43:24,811 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:43:25] 2025-06-04 06:43:24,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:43:25] 2025-06-04 06:43:24,822 [wrapper] pilotpid: 511854
[2025-06-04 06:43:25] 2025-06-04 06:43:24,827 [wrapper] Pilot exit status: 0
[2025-06-04 06:43:25] 2025-06-04 06:43:24,849 [wrapper] pandaids: 6677976189
[2025-06-04 06:43:25] 2025-06-04 06:43:24,905 [wrapper] cleanup supervisor_pilot  530639 511855
[2025-06-04 06:43:25] 2025-06-04 06:43:24,911 [wrapper] Test setup, not cleaning
[2025-06-04 06:43:25] 2025-06-04 06:43:24,919 [wrapper] apfmon messages muted
[2025-06-04 06:43:25] 2025-06-04 06:43:24,924 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:43:25] 2025-06-04 06:43:24,930 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:43:25]  *** Error codes and diagnostics ***
[2025-06-04 06:43:25]     "exeErrorCode": 0,
[2025-06-04 06:43:25]     "exeErrorDiag": "",
[2025-06-04 06:43:25]     "pilotErrorCode": 0,
[2025-06-04 06:43:25]     "pilotErrorDiag": "",
[2025-06-04 06:43:25]  *** Listing of results directory ***
[2025-06-04 06:43:25] total 391408
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:57 pilot3.tar.gz
[2025-06-04 06:43:25] -rwx------ 1 boinc boinc     37140 Jun  3 19:05 runpilot2-wrapper.sh
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:05 queuedata.json
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc       100 Jun  4 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:43:25] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 05:01 run_atlas
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc       105 Jun  4 05:01 job.xml
[2025-06-04 06:43:25] -rw-r--r-- 2 boinc boinc 213834271 Jun  4 05:01 EVNT.45006593._001730.pool.root.1
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc      6318 Jun  4 05:01 init_data.xml
[2025-06-04 06:43:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 05:01 start_atlas.sh
[2025-06-04 06:43:25] drwxrwx--x 2 boinc boinc      4096 Jun  4 05:01 shared
[2025-06-04 06:43:25] -rw-r--r-- 2 boinc boinc    508884 Jun  4 05:01 input.tar.gz
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc         0 Jun  4 05:01 boinc_lockfile
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc      2525 Jun  4 05:01 pandaJob.out
[2025-06-04 06:43:25] -rw------- 1 boinc boinc    986745 Jun  4 05:02 agis_schedconf.cvmfs.json
[2025-06-04 06:43:25] -rw------- 1 boinc boinc   1603667 Jun  4 05:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:43:25] drwx------ 4 boinc boinc      4096 Jun  4 05:02 pilot3
[2025-06-04 06:43:25] -rw------- 1 boinc boinc 181366963 Jun  4 06:42 HITS.45006595._043164.pool.root.1
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc       529 Jun  4 06:42 boinc_task_state.xml
[2025-06-04 06:43:25] -rw------- 1 boinc boinc        95 Jun  4 06:42 pilot_heartbeat.json
[2025-06-04 06:43:25] -rw------- 1 boinc boinc      1041 Jun  4 06:42 memory_monitor_summary.json
[2025-06-04 06:43:25] -rw------- 1 boinc boinc    320603 Jun  4 06:42 log.45006595._043164.job.log.tgz.1
[2025-06-04 06:43:25] -rw------- 1 boinc boinc      7690 Jun  4 06:43 heartbeat.json
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc        27 Jun  4 06:43 wrapper_checkpoint.txt
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc      8192 Jun  4 06:43 boinc_mmap_file
[2025-06-04 06:43:25] -rw------- 1 boinc boinc      4487 Jun  4 06:43 pilotlog.txt
[2025-06-04 06:43:25] -rw------- 1 boinc boinc    557735 Jun  4 06:43 log.45006595._043164.job.log.1
[2025-06-04 06:43:25] -rw------- 1 boinc boinc       357 Jun  4 06:43 output.list
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc       620 Jun  4 06:43 runtime_log
[2025-06-04 06:43:25] -rw------- 1 boinc boinc    901120 Jun  4 06:43 result.tar.gz
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc      8695 Jun  4 06:43 runtime_log.err
[2025-06-04 06:43:25] -rw------- 1 boinc boinc       655 Jun  4 06:43 oiNNDmO8lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWqlKDmHMd2in.diag
[2025-06-04 06:43:25] -rw-r--r-- 1 boinc boinc     21872 Jun  4 06:43 stderr.txt
[2025-06-04 06:43:25] HITS file was successfully produced:
[2025-06-04 06:43:25] -rw------- 1 boinc boinc 181366963 Jun  4 06:42 shared/HITS.pool.root.1
[2025-06-04 06:43:25]  *** Contents of shared directory: ***
[2025-06-04 06:43:25] total 387348
[2025-06-04 06:43:25] -rw-r--r-- 2 boinc boinc 213834271 Jun  4 05:01 ATLAS.root_0
[2025-06-04 06:43:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 05:01 start_atlas.sh
[2025-06-04 06:43:25] -rw-r--r-- 2 boinc boinc    508884 Jun  4 05:01 input.tar.gz
[2025-06-04 06:43:25] -rw------- 1 boinc boinc 181366963 Jun  4 06:42 HITS.pool.root.1
[2025-06-04 06:43:25] -rw------- 1 boinc boinc    901120 Jun  4 06:43 result.tar.gz
06:43:26 (508184): run_atlas exited; CPU time 44673.663838
06:43:26 (508184): called boinc_finish(0)

</stderr_txt>
]]>

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