Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:53 (12091): wrapper (7.7.26015): starting
11:46:53 (12091): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:46:53] Arguments: --nthreads 8
[2025-06-04 11:46:53] Threads: 8
[2025-06-04 11:46:53] Checking for CVMFS
[2025-06-04 11:46:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:46:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:46:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:46:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:46:55] 2.11.2.0 7198 33065 94596 146775 2 69 24613015 25165825 3521 130560 0 17406029 99.798 19264571 2161 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 11:46:55] CVMFS is ok
[2025-06-04 11:46:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:46:55] Checking for apptainer binary...
[2025-06-04 11:46:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:46:55] Running /usr/bin/apptainer --version
[2025-06-04 11:46:55] apptainer version 1.3.2-1.el7
[2025-06-04 11:46:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:57:02] cg-vwn468.simple-grid.lan
[2025-06-04 11:57:02] apptainer works
[2025-06-04 11:57:02] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:57:02] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:57:02] Starting ATLAS job with PandaID=6677976269
[2025-06-04 11:57:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:52:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:52:52] 2025-06-04 13:45:31,675 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6677976269/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:52:52] 2025-06-04 13:45:31,676 | INFO     | extracted standard info from prmon json
[2025-06-04 15:52:52] 2025-06-04 13:45:31,676 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:52:52] 2025-06-04 13:45:31,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:52:52] 2025-06-04 13:45:31,677 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:52:52] 2025-06-04 13:45:31,677 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:52:52] 2025-06-04 13:45:31,682 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:52:52] 2025-06-04 13:45:31,682 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,684 | INFO     | sum of deviations: 69888053189.99998
[2025-06-04 15:52:52] 2025-06-04 13:45:31,684 | INFO     | mean x: 1749038156.0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,684 | INFO     | mean y: 2426400.615023474
[2025-06-04 15:52:52] 2025-06-04 13:45:31,684 | INFO     | -- intersect: -40791411429.78442
[2025-06-04 15:52:52] 2025-06-04 13:45:31,684 | INFO     | intersect: -40791411429.78442
[2025-06-04 15:52:52] 2025-06-04 13:45:31,692 | INFO     | chi2: 6.111761414536675
[2025-06-04 15:52:52] 2025-06-04 13:45:31,693 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,694 | INFO     | sum of deviations: 82038854280.49997
[2025-06-04 15:52:52] 2025-06-04 13:45:31,695 | INFO     | mean x: 1749038003.5
[2025-06-04 15:52:52] 2025-06-04 13:45:31,695 | INFO     | mean y: 2435193.466346154
[2025-06-04 15:52:52] 2025-06-04 13:45:31,695 | INFO     | -- intersect: -51420923868.66845
[2025-06-04 15:52:52] 2025-06-04 13:45:31,695 | INFO     | intersect: -51420923868.66845
[2025-06-04 15:52:52] 2025-06-04 13:45:31,695 | INFO     | chi2: 5.399870016917877
[2025-06-04 15:52:52] 2025-06-04 13:45:31,695 | INFO     | current chi2=5.399870016917877 (change=11.647892470500922 %)
[2025-06-04 15:52:52] 2025-06-04 13:45:31,695 | INFO     | right removable region: 207
[2025-06-04 15:52:52] 2025-06-04 13:45:31,696 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,697 | INFO     | sum of deviations: -2716790184.000004
[2025-06-04 15:52:52] 2025-06-04 13:45:31,698 | INFO     | mean x: 1749038308.5
[2025-06-04 15:52:52] 2025-06-04 13:45:31,698 | INFO     | mean y: 2480063.8173076925
[2025-06-04 15:52:52] 2025-06-04 13:45:31,698 | INFO     | -- intersect: 1705410982.5363667
[2025-06-04 15:52:52] 2025-06-04 13:45:31,698 | INFO     | intersect: 1705410982.5363667
[2025-06-04 15:52:52] 2025-06-04 13:45:31,698 | INFO     | chi2: 1.4401762066107513
[2025-06-04 15:52:52] 2025-06-04 13:45:31,698 | INFO     | current chi2=1.4401762066107513 (change=76.43598777947504 %)
[2025-06-04 15:52:52] 2025-06-04 13:45:31,699 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,700 | INFO     | sum of deviations: -23009391113.0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,701 | INFO     | mean x: 1749038461.0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,708 | INFO     | mean y: 2495654.054187192
[2025-06-04 15:52:52] 2025-06-04 13:45:31,708 | INFO     | -- intersect: 15517378021.780188
[2025-06-04 15:52:52] 2025-06-04 13:45:31,708 | INFO     | intersect: 15517378021.780188
[2025-06-04 15:52:52] 2025-06-04 13:45:31,709 | INFO     | chi2: 0.8753181455118988
[2025-06-04 15:52:52] 2025-06-04 13:45:31,709 | INFO     | current chi2=0.8753181455118988 (change=39.22145488211926 %)
[2025-06-04 15:52:52] 2025-06-04 13:45:31,709 | INFO     | sum of square deviations: 2406926989.5
[2025-06-04 15:52:52] 2025-06-04 13:45:31,711 | INFO     | sum of deviations: -16416474848.5
[2025-06-04 15:52:52] 2025-06-04 13:45:31,711 | INFO     | mean x: 1749038613.5
[2025-06-04 15:52:52] 2025-06-04 13:45:31,711 | INFO     | mean y: 2490270.5606060605
[2025-06-04 15:52:52] 2025-06-04 13:45:31,711 | INFO     | -- intersect: 11931829437.405352
[2025-06-04 15:52:52] 2025-06-04 13:45:31,711 | INFO     | intersect: 11931829437.405352
[2025-06-04 15:52:52] 2025-06-04 13:45:31,711 | INFO     | chi2: 0.8488853226049633
[2025-06-04 15:52:52] 2025-06-04 13:45:31,711 | INFO     | current chi2=0.8488853226049633 (change=3.0197960641473043 %)
[2025-06-04 15:52:52] 2025-06-04 13:45:31,712 | INFO     | left removable region: 30
[2025-06-04 15:52:52] 2025-06-04 13:45:31,712 | INFO     | sum of square deviations: 1719429448.0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,713 | INFO     | sum of deviations: 3681541722.999996
[2025-06-04 15:52:52] 2025-06-04 13:45:31,713 | INFO     | mean x: 1749038888.0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,713 | INFO     | mean y: 2495219.0282485876
[2025-06-04 15:52:52] 2025-06-04 13:45:31,713 | INFO     | -- intersect: -3742444504.326726
[2025-06-04 15:52:52] 2025-06-04 13:45:31,714 | INFO     | intersect: -3742444504.326726
[2025-06-04 15:52:52] 2025-06-04 13:45:31,714 | INFO     | chi2: 0.0003550997189487476
[2025-06-04 15:52:52] 2025-06-04 13:45:31,714 | INFO     | -- intersect: -3742444504.326726
[2025-06-04 15:52:52] 2025-06-04 13:45:31,714 | INFO     | current memory leak: 2.14 B/s (using 177 data points, chi2=0.00)
[2025-06-04 15:52:52] 2025-06-04 13:45:31,715 | INFO     | ..............................
[2025-06-04 15:52:52] 2025-06-04 13:45:31,715 | INFO     | . Timing measurements:
[2025-06-04 15:52:52] 2025-06-04 13:45:31,715 | INFO     | . get job = 0 s
[2025-06-04 15:52:52] 2025-06-04 13:45:31,715 | INFO     | . initial setup = 4 s
[2025-06-04 15:52:52] 2025-06-04 13:45:31,715 | INFO     | . payload setup = 165 s
[2025-06-04 15:52:52] 2025-06-04 13:45:31,716 | INFO     | . stage-in = 0 s
[2025-06-04 15:52:52] 2025-06-04 13:45:31,716 | INFO     | . payload execution = 13091 s
[2025-06-04 15:52:52] 2025-06-04 13:45:31,716 | INFO     | . stage-out = 4 s
[2025-06-04 15:52:52] 2025-06-04 13:45:31,716 | INFO     | . log creation = 1 s
[2025-06-04 15:52:52] 2025-06-04 13:45:31,716 | INFO     | ..............................
[2025-06-04 15:52:52] 2025-06-04 13:45:31,914 | INFO     | 
[2025-06-04 15:52:52] 2025-06-04 13:45:31,914 | INFO     | job summary report
[2025-06-04 15:52:52] 2025-06-04 13:45:31,914 | INFO     | --------------------------------------------------
[2025-06-04 15:52:52] 2025-06-04 13:45:31,914 | INFO     | PanDA job id: 6677976269
[2025-06-04 15:52:52] 2025-06-04 13:45:31,914 | INFO     | task id: 45006595
[2025-06-04 15:52:52] 2025-06-04 13:45:31,914 | INFO     | errors: (none)
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | pilot state: finished 
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | transexitcode: 0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | exeerrorcode: 0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | exeerrordiag: 
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | exitcode: 0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | exitmsg: OK
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | cpuconsumptiontime: 47225 s
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | nevents: 400
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | neventsw: 0
[2025-06-04 15:52:52] 2025-06-04 13:45:31,915 | INFO     | pid: 32499
[2025-06-04 15:52:52] 2025-06-04 13:45:31,916 | INFO     | pgrp: 32499
[2025-06-04 15:52:52] 2025-06-04 13:45:31,916 | INFO     | corecount: 8
[2025-06-04 15:52:52] 2025-06-04 13:45:31,916 | INFO     | event service: False
[2025-06-04 15:52:52] 2025-06-04 13:45:31,916 | INFO     | sizes: {0: 2405184, 1: 2405184, 12: 2405212, 22: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 65: 2405508, 76: 2405536, 79: 2405798, 87: 2405854, 13261: 2435693
[2025-06-04 15:52:52] 2025-06-04 13:45:31,916 | INFO     | --------------------------------------------------
[2025-06-04 15:52:52] 2025-06-04 13:45:31,916 | INFO     | 
[2025-06-04 15:52:52] 2025-06-04 13:45:31,916 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 15:52:52] 2025-06-04 13:45:32,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:52:52] 2025-06-04 13:45:32,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:52:52] 2025-06-04 13:45:32,377 | INFO     | job 6677976269 has completed (purged errors)
[2025-06-04 15:52:52] 2025-06-04 13:45:32,377 | INFO     | overall cleanup function is called
[2025-06-04 15:52:52] 2025-06-04 13:45:33,386 | INFO     | --- collectZombieJob: --- 10, [32499]
[2025-06-04 15:52:52] 2025-06-04 13:45:33,386 | INFO     | zombie collector waiting for pid 32499
[2025-06-04 15:52:52] 2025-06-04 13:45:33,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:52:52] 2025-06-04 13:45:33,386 | INFO     | collected zombie processes
[2025-06-04 15:52:52] 2025-06-04 13:45:33,386 | INFO     | will attempt to kill all subprocesses of pid=32499
[2025-06-04 15:52:52] 2025-06-04 13:45:33,497 | INFO     | process IDs to be killed: [32499] (in reverse order)
[2025-06-04 15:52:52] 2025-06-04 13:45:34,156 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:52:52] 2025-06-04 13:45:34,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:52:52] 2025-06-04 13:45:34,160 | INFO     | did not find any defunct processes belonging to 32499
[2025-06-04 15:52:52] 2025-06-04 13:45:34,163 | INFO     | did not find any defunct processes belonging to 32499
[2025-06-04 15:52:52] 2025-06-04 13:45:34,163 | INFO     | ready for new job
[2025-06-04 15:52:52] 2025-06-04 13:45:34,163 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:52:52] 2025-06-04 13:45:34,171 | INFO     | **************************************
[2025-06-04 15:52:52] 2025-06-04 13:45:34,171 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:52:52] 2025-06-04 13:45:34,172 | INFO     | **************************************
[2025-06-04 15:52:52] 2025-06-04 13:45:34,172 | INFO     | 
[2025-06-04 15:52:52] 2025-06-04 13:45:34,172 | INFO     | pilot is running in a VM
[2025-06-04 15:52:52] 2025-06-04 13:45:34,172 | INFO     | architecture information:
[2025-06-04 15:52:52] 2025-06-04 13:45:34,186 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:52:52] 2025-06-04 13:45:34,475 | INFO     | cat /etc/os-release:
[2025-06-04 15:52:52] NAME="CentOS Linux"
[2025-06-04 15:52:52] VERSION="7 (Core)"
[2025-06-04 15:52:52] ID="centos"
[2025-06-04 15:52:52] ID_LIKE="rhel fedora"
[2025-06-04 15:52:52] VERSION_ID="7"
[2025-06-04 15:52:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:52:52] ANSI_COLOR="0;31"
[2025-06-04 15:52:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:52:52] HOME_URL="https://www.centos.org/"
[2025-06-04 15:52:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:52:52] 
[2025-06-04 15:52:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:52:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:52:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:52:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:52:52] 
[2025-06-04 15:52:52] 2025-06-04 13:45:34,476 | INFO     | **************************************
[2025-06-04 15:52:52] 2025-06-04 13:45:34,979 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 15:52:52] 2025-06-04 13:45:35,164 | INFO     | sufficient remaining disk space (496738762752 B)
[2025-06-04 15:52:52] 2025-06-04 13:45:35,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:52:52] 2025-06-04 13:45:35,165 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:52:52] 2025-06-04 13:45:35,165 | INFO     | update_server=False
[2025-06-04 15:52:52] 2025-06-04 13:45:35,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:52:52] 2025-06-04 13:45:35,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:52:52] 2025-06-04 13:45:35,263 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:52:52] 2025-06-04 13:45:35,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:52:52] 2025-06-04 13:45:35,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:52:52] 2025-06-04 13:45:35,298 | INFO     | all payload control threads have been joined
[2025-06-04 15:52:52] 2025-06-04 13:45:35,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:52:52] 2025-06-04 13:45:35,724 | INFO     | aborting loop
[2025-06-04 15:52:52] 2025-06-04 13:45:35,879 | INFO     | all data control threads have been joined
[2025-06-04 15:52:52] 2025-06-04 13:45:36,171 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:36,213 | INFO     | [job] validate thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:36,217 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:36,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:36,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:52:52] 2025-06-04 13:45:36,304 | INFO     | [payload] control thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:36,330 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:36,730 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:36,847 | INFO     | all job control threads have been joined
[2025-06-04 15:52:52] 2025-06-04 13:45:36,868 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:36,885 | INFO     | [data] control thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:36,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:52:52] 2025-06-04 13:45:37,025 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:37,088 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:37,173 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:37,402 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:37,852 | INFO     | [job] control thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:37,925 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:40,302 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:52:52] 2025-06-04 13:45:41,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208111880000)>', '<ExcThread(monitor, started 140207428974336)>']
[2025-06-04 15:52:52] 2025-06-04 13:45:41,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:52:52] 2025-06-04 13:45:41,298 | INFO     | [monitor] control thread has ended
[2025-06-04 15:52:52] 2025-06-04 13:45:46,203 | INFO     | all workflow threads have been joined
[2025-06-04 15:52:52] 2025-06-04 13:45:46,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:52:52] 2025-06-04 13:45:46,203 | INFO     | traces error code: 0
[2025-06-04 15:52:52] 2025-06-04 13:45:46,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:52:52] 2025-06-04 13:45:46,604 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:52:52] 2025-06-04 13:45:46,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:52:52] 2025-06-04 13:45:46,799 [wrapper] pilotpid: 22622
[2025-06-04 15:52:52] 2025-06-04 13:45:46,899 [wrapper] Pilot exit status: 0
[2025-06-04 15:52:52] 2025-06-04 13:45:47,343 [wrapper] pandaids: 6677976269
[2025-06-04 15:52:52] 2025-06-04 13:45:47,737 [wrapper] cleanup supervisor_pilot 31957 22623
[2025-06-04 15:52:52] 2025-06-04 13:45:47,843 [wrapper] Test setup, not cleaning
[2025-06-04 15:52:52] 2025-06-04 13:45:47,937 [wrapper] apfmon messages muted
[2025-06-04 15:52:52] 2025-06-04 13:45:48,042 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:52:52] 2025-06-04 13:45:48,135 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:52:52]  *** Error codes and diagnostics ***
[2025-06-04 15:52:52]     "exeErrorCode": 0,
[2025-06-04 15:52:52]     "exeErrorDiag": "",
[2025-06-04 15:52:52]     "pilotErrorCode": 0,
[2025-06-04 15:52:52]     "pilotErrorDiag": "",
[2025-06-04 15:52:52]  *** Listing of results directory ***
[2025-06-04 15:52:52] total 399460
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 15:52:52] -rwx------. 1 boinc boinc     37140 Jun  3 21:06 runpilot2-wrapper.sh
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:06 queuedata.json
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc       100 Jun  4 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:52:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 11:46 run_atlas
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc       105 Jun  4 11:46 job.xml
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc      6392 Jun  4 11:46 init_data.xml
[2025-06-04 15:52:52] -rw-r--r--. 2 boinc boinc 217925907 Jun  4 11:46 EVNT.45006593._001733.pool.root.1
[2025-06-04 15:52:52] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:46 start_atlas.sh
[2025-06-04 15:52:52] drwxrwx--x. 2 boinc boinc        68 Jun  4 11:46 shared
[2025-06-04 15:52:52] -rw-r--r--. 2 boinc boinc    508884 Jun  4 11:46 input.tar.gz
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc         0 Jun  4 11:46 boinc_lockfile
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc      2525 Jun  4 11:57 pandaJob.out
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc    986766 Jun  4 11:59 agis_schedconf.cvmfs.json
[2025-06-04 15:52:52] drwx------. 4 boinc boinc      4096 Jun  4 12:00 pilot3
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc 184188109 Jun  4 15:42 HITS.45006595._043244.pool.root.1
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc       531 Jun  4 15:43 boinc_task_state.xml
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc      1015 Jun  4 15:43 memory_monitor_summary.json
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc   1598969 Jun  4 15:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc    391876 Jun  4 15:44 log.45006595._043244.job.log.tgz.1
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc        95 Jun  4 15:45 pilot_heartbeat.json
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc      7690 Jun  4 15:45 heartbeat.json
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc      4416 Jun  4 15:45 pilotlog.txt
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc   1168917 Jun  4 15:45 log.45006595._043244.job.log.1
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc       357 Jun  4 15:45 output.list
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc       620 Jun  4 15:45 runtime_log
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc   1576960 Jun  4 15:45 result.tar.gz
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc      8659 Jun  4 15:45 runtime_log.err
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc       657 Jun  4 15:45 NTPMDms8lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoqlKDm4nlqCn.diag
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc      8192 Jun  4 15:52 boinc_mmap_file
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc        28 Jun  4 15:52 wrapper_checkpoint.txt
[2025-06-04 15:52:52] -rw-r--r--. 1 boinc boinc     20531 Jun  4 15:52 stderr.txt
[2025-06-04 15:52:52] HITS file was successfully produced:
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc 184188109 Jun  4 15:42 shared/HITS.pool.root.1
[2025-06-04 15:52:52]  *** Contents of shared directory: ***
[2025-06-04 15:52:52] total 394748
[2025-06-04 15:52:52] -rw-r--r--. 2 boinc boinc 217925907 Jun  4 11:46 ATLAS.root_0
[2025-06-04 15:52:52] -rw-r--r--. 2 boinc boinc     15093 Jun  4 11:46 start_atlas.sh
[2025-06-04 15:52:52] -rw-r--r--. 2 boinc boinc    508884 Jun  4 11:46 input.tar.gz
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc 184188109 Jun  4 15:42 HITS.pool.root.1
[2025-06-04 15:52:52] -rw-------. 1 boinc boinc   1576960 Jun  4 15:45 result.tar.gz
15:52:54 (12091): run_atlas exited; CPU time 47402.627698
15:52:54 (12091): called boinc_finish(0)

</stderr_txt>
]]>

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