Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:45:19 (1990587): wrapper (7.7.26015): starting
18:45:19 (1990587): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 18:45:19] Arguments: --nthreads 10
[2025-06-03 18:45:19] Threads: 10
[2025-06-03 18:45:19] Checking for CVMFS
[2025-06-03 18:45:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:45:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:45:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:45:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:45:20] 2.12.6.0 2656583 35247 287480 146760 1 258 26209312 32935936 12665 16776704 0 132230778 99.647 122281894 30148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 18:45:20] CVMFS is ok
[2025-06-03 18:45:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:45:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:45:20] Further information can be found at the LHC@home message board.
[2025-06-03 18:45:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:45:20] Checking for apptainer binary...
[2025-06-03 18:45:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:45:20] Running /usr/bin/apptainer --version
[2025-06-03 18:45:20] apptainer version 1.4.1-1.el9
[2025-06-03 18:45:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:45:20] c-4-39.aglt2.org
[2025-06-03 18:45:20] apptainer works
[2025-06-03 18:45:20] Set ATHENA_PROC_NUMBER=10
[2025-06-03 18:45:20] Set ATHENA_CORE_NUMBER=10
[2025-06-03 18:45:20] Starting ATLAS job with PandaID=6677976601
[2025-06-03 18:45:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:11:51]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:11:51]  guid=987f83be-8679-450e-b114-79007cdfcc1d
[2025-06-03 20:11:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 20:11:51]  is_altstaged=None
[2025-06-03 20:11:51]  is_tar=False
[2025-06-03 20:11:51]  lfn=log.45006595._043328.job.log.tgz.1
[2025-06-03 20:11:51]  mtime=0
[2025-06-03 20:11:51]  protocol_id=None
[2025-06-03 20:11:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 20:11:51]  replicas=None
[2025-06-03 20:11:51]  scope=mc23_13p6TeV
[2025-06-03 20:11:51]  status=None
[2025-06-03 20:11:51]  status_code=0
[2025-06-03 20:11:51]  storage_token=
[2025-06-03 20:11:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677976601/log.45006595._043328.job.log.tgz.1
[2025-06-03 20:11:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/d0/log.45006595._043328.job.log.tgz.1
[2025-06-03 20:11:51]  workdir=None
[2025-06-03 20:11:51] ]
[2025-06-03 20:11:51] 2025-06-04 00:11:25,881 | INFO     | transferring file log.45006595._043328.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677976601/log.45006595._043328.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 20:11:51] 2025-06-04 00:11:25,882 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677976601/log.45006595._043328.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._043328.job
[2025-06-03 20:11:51] 2025-06-04 00:11:25,901 | INFO     | adding to output.list: log.45006595._043328.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/d0/log.45006595._043328.job.log.tg
[2025-06-03 20:11:51] 2025-06-04 00:11:25,902 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 20:11:51] 2025-06-04 00:11:25,903 | INFO     | summary of transferred files:
[2025-06-03 20:11:51] 2025-06-04 00:11:25,903 | INFO     |  -- lfn=log.45006595._043328.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 20:11:51] 2025-06-04 00:11:25,903 | INFO     | stage-out finished correctly
[2025-06-03 20:11:51] 2025-06-04 00:11:26,919 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 20:11:51] 2025-06-04 00:11:27,023 | INFO     | job 6677976601 has state=finished
[2025-06-03 20:11:51] 2025-06-04 00:11:27,023 | INFO     | preparing for final server update for job 6677976601 in state='finished'
[2025-06-03 20:11:51] 2025-06-04 00:11:27,024 | INFO     | this job has now completed (state=finished)
[2025-06-03 20:11:51] 2025-06-04 00:11:27,024 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 20:11:51] 2025-06-04 00:11:27,024 | INFO     | log transfer has been attempted: DONE
[2025-06-03 20:11:51] 2025-06-04 00:11:27,024 | INFO     | job 6677976601 has finished - writing final server update
[2025-06-03 20:11:51] 2025-06-04 00:11:27,025 | INFO     | total number of processed events: 400 (read)
[2025-06-03 20:11:51] 2025-06-04 00:11:27,039 | INFO     | executing command: lscpu
[2025-06-03 20:11:51] 2025-06-04 00:11:27,095 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 20:11:51] 2025-06-04 00:11:27,923 | WARNING  | process 2004875 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 20:11:51] 2025-06-04 00:11:27,924 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976601/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:11:51] 2025-06-04 00:11:28,256 | INFO     | number of running child processes to parent process 2004875: 1
[2025-06-03 20:11:51] 2025-06-04 00:11:28,256 | INFO     | maximum number of monitored processes: 6
[2025-06-03 20:11:51] 2025-06-04 00:11:30,758 | INFO     | monitor loop #378: job 0:6677976601 is in state 'finished'
[2025-06-03 20:11:51] 2025-06-04 00:11:30,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:11:51] 2025-06-04 00:11:31,235 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 20:11:51] 2025-06-04 00:11:31,236 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976601/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:11:51] 2025-06-04 00:11:31,237 | INFO     | extracted standard info from prmon json
[2025-06-03 20:11:51] 2025-06-04 00:11:31,237 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:11:51] 2025-06-04 00:11:31,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:11:51] 2025-06-04 00:11:31,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:11:51] 2025-06-04 00:11:31,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:11:51] 2025-06-04 00:11:31,240 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:11:51] 2025-06-04 00:11:31,240 | INFO     | sum of square deviations: 141539398.0
[2025-06-03 20:11:51] 2025-06-04 00:11:31,241 | INFO     | sum of deviations: 1166670993.999998
[2025-06-03 20:11:51] 2025-06-04 00:11:31,241 | INFO     | mean x: 1748993381.0
[2025-06-03 20:11:51] 2025-06-04 00:11:31,241 | INFO     | mean y: 2330411.6363636362
[2025-06-03 20:11:51] 2025-06-04 00:11:31,241 | INFO     | -- intersect: -14414149205.654982
[2025-06-03 20:11:51] 2025-06-04 00:11:31,241 | INFO     | intersect: -14414149205.654982
[2025-06-03 20:11:51] 2025-06-04 00:11:31,241 | INFO     | chi2: 1.1479801455371477
[2025-06-03 20:11:51] 2025-06-04 00:11:31,241 | INFO     | -- intersect: -14414149205.654982
[2025-06-03 20:11:51] 2025-06-04 00:11:31,242 | INFO     | current memory leak: 8.24 B/s (using 77 data points, chi2=1.15)
[2025-06-03 20:11:51] 2025-06-04 00:11:31,242 | INFO     | ..............................
[2025-06-03 20:11:51] 2025-06-04 00:11:31,242 | INFO     | . Timing measurements:
[2025-06-03 20:11:51] 2025-06-04 00:11:31,242 | INFO     | . get job = 0 s
[2025-06-03 20:11:51] 2025-06-04 00:11:31,242 | INFO     | . initial setup = 2 s
[2025-06-03 20:11:51] 2025-06-04 00:11:31,243 | INFO     | . payload setup = 7 s
[2025-06-03 20:11:51] 2025-06-04 00:11:31,243 | INFO     | . stage-in = 0 s
[2025-06-03 20:11:51] 2025-06-04 00:11:31,243 | INFO     | . payload execution = 5126 s
[2025-06-03 20:11:51] 2025-06-04 00:11:31,243 | INFO     | . stage-out = 0 s
[2025-06-03 20:11:51] 2025-06-04 00:11:31,243 | INFO     | . log creation = 0 s
[2025-06-03 20:11:51] 2025-06-04 00:11:31,243 | INFO     | ..............................
[2025-06-03 20:11:51] 2025-06-04 00:11:31,351 | INFO     | 
[2025-06-03 20:11:51] 2025-06-04 00:11:31,352 | INFO     | job summary report
[2025-06-03 20:11:51] 2025-06-04 00:11:31,352 | INFO     | --------------------------------------------------
[2025-06-03 20:11:51] 2025-06-04 00:11:31,352 | INFO     | PanDA job id: 6677976601
[2025-06-03 20:11:51] 2025-06-04 00:11:31,352 | INFO     | task id: 45006595
[2025-06-03 20:11:51] 2025-06-04 00:11:31,352 | INFO     | errors: (none)
[2025-06-03 20:11:51] 2025-06-04 00:11:31,352 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:11:51] 2025-06-04 00:11:31,352 | INFO     | pilot state: finished 
[2025-06-03 20:11:51] 2025-06-04 00:11:31,352 | INFO     | transexitcode: 0
[2025-06-03 20:11:51] 2025-06-04 00:11:31,352 | INFO     | exeerrorcode: 0
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | exeerrordiag: 
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | exitcode: 0
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | exitmsg: OK
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | cpuconsumptiontime: 42639 s
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | nevents: 400
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | neventsw: 0
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | pid: 2004875
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | pgrp: 2004875
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | corecount: 10
[2025-06-03 20:11:51] 2025-06-04 00:11:31,353 | INFO     | event service: False
[2025-06-03 20:11:51] 2025-06-04 00:11:31,354 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 5137: 2431577, 5139: 2440518, 5140: 2440702, 5144: 2440872}
[2025-06-03 20:11:51] 2025-06-04 00:11:31,354 | INFO     | --------------------------------------------------
[2025-06-03 20:11:51] 2025-06-04 00:11:31,354 | INFO     | 
[2025-06-03 20:11:51] 2025-06-04 00:11:31,354 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 20:11:51] 2025-06-04 00:11:31,375 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,377 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:11:51] 2025-06-04 00:11:31,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,377 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:11:51] 2025-06-04 00:11:31,378 | INFO     | job 6677976601 has completed (purged errors)
[2025-06-03 20:11:51] 2025-06-04 00:11:31,378 | INFO     | overall cleanup function is called
[2025-06-03 20:11:51] 2025-06-04 00:11:32,385 | INFO     | --- collectZombieJob: --- 10, [2004875]
[2025-06-03 20:11:51] 2025-06-04 00:11:32,385 | INFO     | zombie collector waiting for pid 2004875
[2025-06-03 20:11:51] 2025-06-04 00:11:32,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:11:51] 2025-06-04 00:11:32,385 | INFO     | collected zombie processes
[2025-06-03 20:11:51] 2025-06-04 00:11:32,385 | INFO     | will attempt to kill all subprocesses of pid=2004875
[2025-06-03 20:11:51] 2025-06-04 00:11:32,726 | INFO     | process IDs to be killed: [2004875] (in reverse order)
[2025-06-03 20:11:51] 2025-06-04 00:11:32,823 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:11:51] 2025-06-04 00:11:32,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:11:51] 2025-06-04 00:11:32,837 | INFO     | did not find any defunct processes belonging to 2004875
[2025-06-03 20:11:51] 2025-06-04 00:11:32,849 | INFO     | did not find any defunct processes belonging to 2004875
[2025-06-03 20:11:51] 2025-06-04 00:11:32,850 | INFO     | ready for new job
[2025-06-03 20:11:51] 2025-06-04 00:11:32,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:11:51] 2025-06-04 00:11:32,852 | INFO     | **************************************
[2025-06-03 20:11:51] 2025-06-04 00:11:32,852 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:11:51] 2025-06-04 00:11:32,853 | INFO     | **************************************
[2025-06-03 20:11:51] 2025-06-04 00:11:32,853 | INFO     | 
[2025-06-03 20:11:51] 2025-06-04 00:11:32,866 | INFO     | architecture information:
[2025-06-03 20:11:51] 2025-06-04 00:11:32,867 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:11:51] 2025-06-04 00:11:32,883 | INFO     | cat /etc/os-release:
[2025-06-03 20:11:51] NAME="CentOS Linux"
[2025-06-03 20:11:51] VERSION="7 (Core)"
[2025-06-03 20:11:51] ID="centos"
[2025-06-03 20:11:51] ID_LIKE="rhel fedora"
[2025-06-03 20:11:51] VERSION_ID="7"
[2025-06-03 20:11:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:11:51] ANSI_COLOR="0;31"
[2025-06-03 20:11:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:11:51] HOME_URL="https://www.centos.org/"
[2025-06-03 20:11:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:11:51] 
[2025-06-03 20:11:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:11:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:11:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:11:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:11:51] 
[2025-06-03 20:11:51] 2025-06-04 00:11:32,883 | INFO     | **************************************
[2025-06-03 20:11:51] 2025-06-04 00:11:33,386 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 20:11:51] 2025-06-04 00:11:33,404 | INFO     | sufficient remaining disk space (76590088192 B)
[2025-06-03 20:11:51] 2025-06-04 00:11:33,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:11:51] 2025-06-04 00:11:33,404 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:11:51] 2025-06-04 00:11:33,405 | INFO     | update_server=False
[2025-06-03 20:11:51] 2025-06-04 00:11:33,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:11:51] 2025-06-04 00:11:33,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:11:51] 2025-06-04 00:11:33,551 | INFO     | all payload control threads have been joined
[2025-06-03 20:11:51] 2025-06-04 00:11:33,587 | INFO     | all data control threads have been joined
[2025-06-03 20:11:51] 2025-06-04 00:11:33,665 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:11:51] 2025-06-04 00:11:33,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:11:51] 2025-06-04 00:11:33,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:11:51] 2025-06-04 00:11:33,926 | INFO     | all job control threads have been joined
[2025-06-03 20:11:51] 2025-06-04 00:11:34,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:11:51] 2025-06-04 00:11:34,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:11:51] 2025-06-04 00:11:34,268 | INFO     | aborting loop
[2025-06-03 20:11:51] 2025-06-04 00:11:34,410 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:34,556 | INFO     | [payload] control thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:34,593 | INFO     | [data] control thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:34,671 | INFO     | [job] validate thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:34,900 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:34,931 | INFO     | [job] control thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:35,273 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:35,533 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:35,798 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:35,880 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:35,900 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:36,007 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:36,027 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:36,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:11:51] 2025-06-04 00:11:37,364 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:37,408 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:43,668 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:11:51] 2025-06-04 00:11:44,672 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:11:51] 2025-06-04 00:11:46,175 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140326418724672)>', '<ExcThread(monitor, started 140325708363520)>']
[2025-06-03 20:11:51] 2025-06-04 00:11:46,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:11:51] 2025-06-04 00:11:46,720 | INFO     | [monitor] control thread has ended
[2025-06-03 20:11:51] 2025-06-04 00:11:51,201 | INFO     | all workflow threads have been joined
[2025-06-03 20:11:51] 2025-06-04 00:11:51,201 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:11:51] 2025-06-04 00:11:51,201 | INFO     | traces error code: 0
[2025-06-03 20:11:51] 2025-06-04 00:11:51,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:11:51] 2025-06-04 00:11:51,406 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:11:51] 2025-06-04 00:11:51,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:11:51] 2025-06-04 00:11:51,412 [wrapper] pilotpid: 1995713
[2025-06-03 20:11:51] 2025-06-04 00:11:51,416 [wrapper] Pilot exit status: 0
[2025-06-03 20:11:51] 2025-06-04 00:11:51,427 [wrapper] pandaids: 6677976601
[2025-06-03 20:11:51] 2025-06-04 00:11:51,492 [wrapper] cleanup supervisor_pilot 2204661 1995714
[2025-06-03 20:11:51] 2025-06-04 00:11:51,495 [wrapper] Test setup, not cleaning
[2025-06-03 20:11:51] 2025-06-04 00:11:51,498 [wrapper] apfmon messages muted
[2025-06-03 20:11:51] 2025-06-04 00:11:51,501 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:11:51] 2025-06-04 00:11:51,504 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:11:51]  *** Error codes and diagnostics ***
[2025-06-03 20:11:51]     "exeErrorCode": 0,
[2025-06-03 20:11:51]     "exeErrorDiag": "",
[2025-06-03 20:11:51]     "pilotErrorCode": 0,
[2025-06-03 20:11:51]     "pilotErrorDiag": "",
[2025-06-03 20:11:51]  *** Listing of results directory ***
[2025-06-03 20:11:51] total 394912
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:08 queuedata.json
[2025-06-03 20:11:51] -rwx------. 1 boincer umatlas     37140 Jun  3 15:09 runpilot2-wrapper.sh
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas       100 Jun  3 18:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:11:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 18:45 run_atlas
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas       105 Jun  3 18:45 job.xml
[2025-06-03 20:11:51] -rw-r--r--. 2 boincer umatlas 213301196 Jun  3 18:45 EVNT.45006593._001737.pool.root.1
[2025-06-03 20:11:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:45 start_atlas.sh
[2025-06-03 20:11:51] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 18:45 shared
[2025-06-03 20:11:51] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 18:45 input.tar.gz
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas         0 Jun  3 18:45 boinc_lockfile
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 18:45 pandaJob.out
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas    986861 Jun  3 18:45 agis_schedconf.cvmfs.json
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas   1603667 Jun  3 18:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:11:51] drwx------. 4 boincer umatlas      4096 Jun  3 18:45 pilot3
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 20:09 init_data.xml
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas 185597160 Jun  3 20:10 HITS.45006595._043328.pool.root.1
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas       529 Jun  3 20:10 boinc_task_state.xml
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas      1030 Jun  3 20:11 memory_monitor_summary.json
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas    333975 Jun  3 20:11 log.45006595._043328.job.log.tgz.1
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas      7708 Jun  3 20:11 heartbeat.json
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas        95 Jun  3 20:11 pilot_heartbeat.json
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 20:11 boinc_mmap_file
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas        27 Jun  3 20:11 wrapper_checkpoint.txt
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas      4425 Jun  3 20:11 pilotlog.txt
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas    498936 Jun  3 20:11 log.45006595._043328.job.log.1
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas       357 Jun  3 20:11 output.list
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas       620 Jun  3 20:11 runtime_log
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas    849920 Jun  3 20:11 result.tar.gz
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas      8651 Jun  3 20:11 runtime_log.err
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas       650 Jun  3 20:11 l1nLDmzBmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4gZKDmalz9kn.diag
[2025-06-03 20:11:51] -rw-r--r--. 1 boincer umatlas     21312 Jun  3 20:11 stderr.txt
[2025-06-03 20:11:51] HITS file was successfully produced:
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas 185597160 Jun  3 20:10 shared/HITS.pool.root.1
[2025-06-03 20:11:51]  *** Contents of shared directory: ***
[2025-06-03 20:11:51] total 390900
[2025-06-03 20:11:51] -rw-r--r--. 2 boincer umatlas 213301196 Jun  3 18:45 ATLAS.root_0
[2025-06-03 20:11:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:45 start_atlas.sh
[2025-06-03 20:11:51] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 18:45 input.tar.gz
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas 185597160 Jun  3 20:10 HITS.pool.root.1
[2025-06-03 20:11:51] -rw-------. 1 boincer umatlas    849920 Jun  3 20:11 result.tar.gz
20:11:53 (1990587): run_atlas exited; CPU time 42744.934183
20:11:53 (1990587): called boinc_finish(0)

</stderr_txt>
]]>

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