Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:45:25 (54690): wrapper (7.7.26015): starting
18:45:25 (54690): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:45:25] Arguments: --nthreads 8
[2025-06-03 18:45:25] Threads: 8
[2025-06-03 18:45:25] Checking for CVMFS
[2025-06-03 18:45:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:45:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:45:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:45:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:45:25] 2.11.2.0 74184 11871 332772 146760 2 304 16164586 18432001 14120 130560 0 66888574 99.599 52940529 41377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 18:45:25] CVMFS is ok
[2025-06-03 18:45:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:45:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:45:25] Further information can be found at the LHC@home message board.
[2025-06-03 18:45:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:45:25] Checking for apptainer binary...
[2025-06-03 18:45:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:45:25] Running /usr/bin/apptainer --version
[2025-06-03 18:45:26] apptainer version 1.3.2-1.el7
[2025-06-03 18:45:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:45:27] c-212-13.aglt2.org
[2025-06-03 18:45:27] apptainer works
[2025-06-03 18:45:27] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:45:27] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:45:27] Starting ATLAS job with PandaID=6677658180
[2025-06-03 18:45:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:53:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:53:11]  scope=mc23_13p6TeV
[2025-06-03 19:53:11]  status=None
[2025-06-03 19:53:11]  status_code=0
[2025-06-03 19:53:11]  storage_token=
[2025-06-03 19:53:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677658180/log.45006595._034978.job.log.tgz.1
[2025-06-03 19:53:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/0e/log.45006595._034978.job.log.tgz.1
[2025-06-03 19:53:11]  workdir=None
[2025-06-03 19:53:11] ]
[2025-06-03 19:53:11] 2025-06-03 23:52:43,040 | INFO     | transferring file log.45006595._034978.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677658180/log.45006595._034978.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 19:53:11] 2025-06-03 23:52:43,041 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677658180/log.45006595._034978.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._034978.job
[2025-06-03 19:53:11] 2025-06-03 23:52:43,093 | INFO     | adding to output.list: log.45006595._034978.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/0e/log.45006595._034978.job.log.tg
[2025-06-03 19:53:11] 2025-06-03 23:52:43,094 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 19:53:11] 2025-06-03 23:52:43,094 | INFO     | summary of transferred files:
[2025-06-03 19:53:11] 2025-06-03 23:52:43,094 | INFO     |  -- lfn=log.45006595._034978.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 19:53:11] 2025-06-03 23:52:43,095 | INFO     | stage-out finished correctly
[2025-06-03 19:53:11] 2025-06-03 23:52:44,776 | INFO     | PID=58385 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 19:53:11] 2025-06-03 23:52:44,777 | INFO     | .. there are 18 such processes running
[2025-06-03 19:53:11] 2025-06-03 23:52:45,242 | INFO     | monitor loop #309: job 0:6677658180 is in state 'finished'
[2025-06-03 19:53:11] 2025-06-03 23:52:45,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:53:11] 2025-06-03 23:52:45,802 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 19:53:11] 2025-06-03 23:52:47,410 | INFO     | job 6677658180 has state=finished
[2025-06-03 19:53:11] 2025-06-03 23:52:47,411 | INFO     | preparing for final server update for job 6677658180 in state='finished'
[2025-06-03 19:53:11] 2025-06-03 23:52:47,547 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 19:53:11] 2025-06-03 23:52:47,547 | INFO     | this job has now completed (state=finished)
[2025-06-03 19:53:11] 2025-06-03 23:52:47,548 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 19:53:11] 2025-06-03 23:52:47,548 | INFO     | log transfer has been attempted: DONE
[2025-06-03 19:53:11] 2025-06-03 23:52:47,548 | INFO     | job 6677658180 has finished - writing final server update
[2025-06-03 19:53:11] 2025-06-03 23:52:47,548 | INFO     | total number of processed events: 400 (read)
[2025-06-03 19:53:11] 2025-06-03 23:52:47,572 | INFO     | executing command: lscpu
[2025-06-03 19:53:11] 2025-06-03 23:52:47,667 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 19:53:11] 2025-06-03 23:52:47,744 | INFO     | monitor loop #310: job 0:6677658180 is in state 'finished'
[2025-06-03 19:53:11] 2025-06-03 23:52:47,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:53:11] 2025-06-03 23:52:47,782 | INFO     | 4019s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 19:53:11] 2025-06-03 23:52:50,247 | INFO     | monitor loop #311: job 0:6677658180 is in state 'finished'
[2025-06-03 19:53:11] 2025-06-03 23:52:50,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:53:11] 2025-06-03 23:52:52,751 | INFO     | monitor loop #312: job 0:6677658180 is in state 'finished'
[2025-06-03 19:53:11] 2025-06-03 23:52:52,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:53:11] 2025-06-03 23:52:55,253 | INFO     | monitor loop #313: job 0:6677658180 is in state 'finished'
[2025-06-03 19:53:11] 2025-06-03 23:52:55,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:53:11] 2025-06-03 23:52:57,596 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 19:53:11] 2025-06-03 23:52:57,596 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677658180/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:53:11] 2025-06-03 23:52:57,597 | INFO     | extracted standard info from prmon json
[2025-06-03 19:53:11] 2025-06-03 23:52:57,598 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:53:11] 2025-06-03 23:52:57,598 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:53:11] 2025-06-03 23:52:57,598 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:53:11] 2025-06-03 23:52:57,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:53:11] 2025-06-03 23:52:57,599 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:53:11] 2025-06-03 23:52:57,600 | INFO     | sum of square deviations: 60482994.5
[2025-06-03 19:53:11] 2025-06-03 23:52:57,600 | INFO     | sum of deviations: -75305841.9999998
[2025-06-03 19:53:11] 2025-06-03 23:52:57,600 | INFO     | mean x: 1748992843.5
[2025-06-03 19:53:11] 2025-06-03 23:52:57,600 | INFO     | mean y: 2496026.2413793104
[2025-06-03 19:53:11] 2025-06-03 23:52:57,600 | INFO     | -- intersect: 2180122643.7816434
[2025-06-03 19:53:11] 2025-06-03 23:52:57,600 | INFO     | intersect: 2180122643.7816434
[2025-06-03 19:53:11] 2025-06-03 23:52:57,600 | INFO     | chi2: 0.02188961964460181
[2025-06-03 19:53:11] 2025-06-03 23:52:57,600 | INFO     | -- intersect: 2180122643.7816434
[2025-06-03 19:53:11] 2025-06-03 23:52:57,600 | INFO     | current memory leak: -1.25 B/s (using 58 data points, chi2=0.02)
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | ..............................
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | . Timing measurements:
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | . get job = 0 s
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | . initial setup = 2 s
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | . payload setup = 15 s
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | . stage-in = 0 s
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | . payload execution = 3967 s
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | . stage-out = 0 s
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | . log creation = 0 s
[2025-06-03 19:53:11] 2025-06-03 23:52:57,601 | INFO     | ..............................
[2025-06-03 19:53:11] 2025-06-03 23:52:57,682 | INFO     | 
[2025-06-03 19:53:11] 2025-06-03 23:52:57,682 | INFO     | job summary report
[2025-06-03 19:53:11] 2025-06-03 23:52:57,682 | INFO     | --------------------------------------------------
[2025-06-03 19:53:11] 2025-06-03 23:52:57,682 | INFO     | PanDA job id: 6677658180
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | task id: 45006595
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | errors: (none)
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | pilot state: finished 
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | transexitcode: 0
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | exeerrorcode: 0
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | exeerrordiag: 
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | exitcode: 0
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | exitmsg: OK
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | cpuconsumptiontime: 26616 s
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | nevents: 400
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | neventsw: 0
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | pid: 65062
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | pgrp: 65062
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | corecount: 8
[2025-06-03 19:53:11] 2025-06-03 23:52:57,683 | INFO     | event service: False
[2025-06-03 19:53:11] 2025-06-03 23:52:57,684 | INFO     | sizes: {0: 2405013, 1: 2405212, 8: 2405418, 11: 2405446, 3986: 2431251, 3988: 2440192, 3991: 2440376, 4003: 2440546}
[2025-06-03 19:53:11] 2025-06-03 23:52:57,684 | INFO     | --------------------------------------------------
[2025-06-03 19:53:11] 2025-06-03 23:52:57,684 | INFO     | 
[2025-06-03 19:53:11] 2025-06-03 23:52:57,684 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 19:53:11] 2025-06-03 23:52:57,868 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,868 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,868 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:53:11] 2025-06-03 23:52:57,869 | INFO     | job 6677658180 has completed (purged errors)
[2025-06-03 19:53:11] 2025-06-03 23:52:57,870 | INFO     | overall cleanup function is called
[2025-06-03 19:53:11] 2025-06-03 23:52:58,881 | INFO     | --- collectZombieJob: --- 10, [65062]
[2025-06-03 19:53:11] 2025-06-03 23:52:58,881 | INFO     | zombie collector waiting for pid 65062
[2025-06-03 19:53:11] 2025-06-03 23:52:58,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:53:11] 2025-06-03 23:52:58,882 | INFO     | collected zombie processes
[2025-06-03 19:53:11] 2025-06-03 23:52:58,882 | INFO     | will attempt to kill all subprocesses of pid=65062
[2025-06-03 19:53:11] 2025-06-03 23:52:59,119 | INFO     | process IDs to be killed: [65062] (in reverse order)
[2025-06-03 19:53:11] 2025-06-03 23:52:59,289 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:53:11] 2025-06-03 23:52:59,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:53:11] 2025-06-03 23:52:59,298 | INFO     | did not find any defunct processes belonging to 65062
[2025-06-03 19:53:11] 2025-06-03 23:52:59,304 | INFO     | did not find any defunct processes belonging to 65062
[2025-06-03 19:53:11] 2025-06-03 23:52:59,304 | INFO     | ready for new job
[2025-06-03 19:53:11] 2025-06-03 23:52:59,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:53:11] 2025-06-03 23:52:59,305 | INFO     | **************************************
[2025-06-03 19:53:11] 2025-06-03 23:52:59,305 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:53:11] 2025-06-03 23:52:59,305 | INFO     | **************************************
[2025-06-03 19:53:11] 2025-06-03 23:52:59,305 | INFO     | 
[2025-06-03 19:53:11] 2025-06-03 23:52:59,309 | INFO     | architecture information:
[2025-06-03 19:53:11] 2025-06-03 23:52:59,309 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:53:11] 2025-06-03 23:52:59,323 | INFO     | cat /etc/os-release:
[2025-06-03 19:53:11] NAME="CentOS Linux"
[2025-06-03 19:53:11] VERSION="7 (Core)"
[2025-06-03 19:53:11] ID="centos"
[2025-06-03 19:53:11] ID_LIKE="rhel fedora"
[2025-06-03 19:53:11] VERSION_ID="7"
[2025-06-03 19:53:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:53:11] ANSI_COLOR="0;31"
[2025-06-03 19:53:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:53:11] HOME_URL="https://www.centos.org/"
[2025-06-03 19:53:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:53:11] 
[2025-06-03 19:53:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:53:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:53:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:53:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:53:11] 
[2025-06-03 19:53:11] 2025-06-03 23:52:59,323 | INFO     | **************************************
[2025-06-03 19:53:11] 2025-06-03 23:52:59,826 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 19:53:11] 2025-06-03 23:52:59,843 | INFO     | sufficient remaining disk space (104087945216 B)
[2025-06-03 19:53:11] 2025-06-03 23:52:59,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:53:11] 2025-06-03 23:52:59,844 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:53:11] 2025-06-03 23:52:59,844 | INFO     | update_server=False
[2025-06-03 19:53:11] 2025-06-03 23:52:59,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:53:11] 2025-06-03 23:53:00,026 | INFO     | all payload control threads have been joined
[2025-06-03 19:53:11] 2025-06-03 23:53:00,263 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 19:53:11] 2025-06-03 23:53:00,263 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 19:53:11] 2025-06-03 23:53:00,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:53:11] 2025-06-03 23:53:00,263 | INFO     | will abort loop
[2025-06-03 19:53:11] 2025-06-03 23:53:00,813 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:53:11] 2025-06-03 23:53:00,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:53:11] 2025-06-03 23:53:00,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:53:11] 2025-06-03 23:53:00,848 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:00,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:53:11] 2025-06-03 23:53:00,905 | INFO     | all data control threads have been joined
[2025-06-03 19:53:11] 2025-06-03 23:53:00,973 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,002 | INFO     | all job control threads have been joined
[2025-06-03 19:53:11] 2025-06-03 23:53:01,032 | INFO     | [payload] control thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,162 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,163 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:53:11] 2025-06-03 23:53:01,268 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,378 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,631 | INFO     | [job] validate thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,748 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,877 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:01,910 | INFO     | [data] control thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:02,007 | INFO     | [job] control thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:02,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:53:11] 2025-06-03 23:53:03,188 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:03,701 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:04,895 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:53:11] 2025-06-03 23:53:05,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076504962880)>', '<ExcThread(monitor, started 140075895600896)>']
[2025-06-03 19:53:11] 2025-06-03 23:53:05,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:53:11] 2025-06-03 23:53:05,839 | INFO     | [monitor] control thread has ended
[2025-06-03 19:53:11] 2025-06-03 23:53:10,844 | INFO     | all workflow threads have been joined
[2025-06-03 19:53:11] 2025-06-03 23:53:10,845 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:53:11] 2025-06-03 23:53:10,845 | INFO     | traces error code: 0
[2025-06-03 19:53:11] 2025-06-03 23:53:10,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:53:11] 2025-06-03 23:53:10,912 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:53:11] 2025-06-03 23:53:10,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:53:11] 2025-06-03 23:53:10,918 [wrapper] pilotpid: 58385
[2025-06-03 19:53:11] 2025-06-03 23:53:10,921 [wrapper] Pilot exit status: 0
[2025-06-03 19:53:11] 2025-06-03 23:53:10,964 [wrapper] pandaids: 6677658180
[2025-06-03 19:53:11] 2025-06-03 23:53:11,035 [wrapper] cleanup supervisor_pilot 98150 58386
[2025-06-03 19:53:11] 2025-06-03 23:53:11,038 [wrapper] Test setup, not cleaning
[2025-06-03 19:53:11] 2025-06-03 23:53:11,040 [wrapper] apfmon messages muted
[2025-06-03 19:53:11] 2025-06-03 23:53:11,042 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:53:11] 2025-06-03 23:53:11,043 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:53:11]  *** Error codes and diagnostics ***
[2025-06-03 19:53:11]     "exeErrorCode": 0,
[2025-06-03 19:53:11]     "exeErrorDiag": "",
[2025-06-03 19:53:11]     "pilotErrorCode": 0,
[2025-06-03 19:53:11]     "pilotErrorDiag": "",
[2025-06-03 19:53:11]  *** Listing of results directory ***
[2025-06-03 19:53:11] total 389332
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 10:09 pilot3.tar.gz
[2025-06-03 19:53:11] -rwx------ 1 boincer umatlas     37140 Jun  3 10:12 runpilot2-wrapper.sh
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 10:12 queuedata.json
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas       100 Jun  3 18:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:53:11] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 18:45 run_atlas
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas       105 Jun  3 18:45 job.xml
[2025-06-03 19:53:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:45 start_atlas.sh
[2025-06-03 19:53:11] drwxrwx--x 2 boincer umatlas      4096 Jun  3 18:45 shared
[2025-06-03 19:53:11] -rw-r--r-- 2 boincer umatlas    508879 Jun  3 18:45 input.tar.gz
[2025-06-03 19:53:11] -rw-r--r-- 2 boincer umatlas 216515817 Jun  3 18:45 EVNT.45006593._001406.pool.root.1
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas         0 Jun  3 18:45 boinc_lockfile
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 18:45 pandaJob.out
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas    986861 Jun  3 18:45 agis_schedconf.cvmfs.json
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas   1603667 Jun  3 18:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:53:11] drwx------ 4 boincer umatlas      4096 Jun  3 18:45 pilot3
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas      6387 Jun  3 19:48 init_data.xml
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas 176912789 Jun  3 19:52 HITS.45006595._034978.pool.root.1
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas       530 Jun  3 19:52 boinc_task_state.xml
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas      1069 Jun  3 19:52 memory_monitor_summary.json
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas    299082 Jun  3 19:52 log.45006595._034978.job.log.tgz.1
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas        95 Jun  3 19:52 pilot_heartbeat.json
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas      7736 Jun  3 19:52 heartbeat.json
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 19:53 boinc_mmap_file
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas        27 Jun  3 19:53 wrapper_checkpoint.txt
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas      4540 Jun  3 19:53 pilotlog.txt
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas    405405 Jun  3 19:53 log.45006595._034978.job.log.1
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas       357 Jun  3 19:53 output.list
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas       620 Jun  3 19:53 runtime_log
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas    727040 Jun  3 19:53 result.tar.gz
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 19:53 runtime_log.err
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas       657 Jun  3 19:53 CfHMDmHYhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOVkKDmKPCLEm.diag
[2025-06-03 19:53:11] -rw-r--r-- 1 boincer umatlas     21960 Jun  3 19:53 stderr.txt
[2025-06-03 19:53:11] HITS file was successfully produced:
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas 176912789 Jun  3 19:52 shared/HITS.pool.root.1
[2025-06-03 19:53:11]  *** Contents of shared directory: ***
[2025-06-03 19:53:11] total 385444
[2025-06-03 19:53:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 18:45 start_atlas.sh
[2025-06-03 19:53:11] -rw-r--r-- 2 boincer umatlas    508879 Jun  3 18:45 input.tar.gz
[2025-06-03 19:53:11] -rw-r--r-- 2 boincer umatlas 216515817 Jun  3 18:45 ATLAS.root_0
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas 176912789 Jun  3 19:52 HITS.pool.root.1
[2025-06-03 19:53:11] -rw------- 1 boincer umatlas    727040 Jun  3 19:53 result.tar.gz
19:53:12 (54690): run_atlas exited; CPU time 26526.279253
19:53:12 (54690): called boinc_finish(0)

</stderr_txt>
]]>

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