Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:49:34 (1807767): wrapper (7.7.26015): starting
18:49:34 (1807767): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:49:34] Arguments: --nthreads 8
[2025-06-03 18:49:34] Threads: 8
[2025-06-03 18:49:34] Checking for CVMFS
[2025-06-03 18:49:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:49:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:49:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:49:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:49:34] 2.12.6.0 5613 520 75564 146760 0 187 27388477 40960001 5440 16776704 0 3453323 99.999 158738 49190 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 18:49:34] CVMFS is ok
[2025-06-03 18:49:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:49:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:49:34] Further information can be found at the LHC@home message board.
[2025-06-03 18:49:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:49:34] Checking for apptainer binary...
[2025-06-03 18:49:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:49:34] Running /usr/bin/apptainer --version
[2025-06-03 18:49:34] apptainer version 1.4.1-1.el9
[2025-06-03 18:49:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:49:34] c6-8-12-2.aglt2.org
[2025-06-03 18:49:34] apptainer works
[2025-06-03 18:49:34] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:49:34] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:49:34] Starting ATLAS job with PandaID=6677976592
[2025-06-03 18:49:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:36:08]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:36:08] 2025-06-04 02:35:53,356 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677976592/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:36:08] 2025-06-04 02:35:53,356 | INFO     | extracted standard info from prmon json
[2025-06-03 22:36:08] 2025-06-04 02:35:53,357 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:36:08] 2025-06-04 02:35:53,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:36:08] 2025-06-04 02:35:53,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:36:08] 2025-06-04 02:35:53,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:36:08] 2025-06-04 02:35:53,361 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:36:08] 2025-06-04 02:35:53,361 | INFO     | sum of square deviations: 3391980043.333353
[2025-06-03 22:36:08] 2025-06-04 02:35:53,362 | INFO     | sum of deviations: 84351851693.33334
[2025-06-03 22:36:08] 2025-06-04 02:35:53,363 | INFO     | mean x: 1748997749.3333333
[2025-06-03 22:36:08] 2025-06-04 02:35:53,363 | INFO     | mean y: 2090448.536036036
[2025-06-03 22:36:08] 2025-06-04 02:35:53,363 | INFO     | -- intersect: -43492033007.08367
[2025-06-03 22:36:08] 2025-06-04 02:35:53,363 | INFO     | intersect: -43492033007.08367
[2025-06-03 22:36:08] 2025-06-04 02:35:53,363 | INFO     | chi2: 3.4131558576654037
[2025-06-03 22:36:08] 2025-06-04 02:35:53,363 | INFO     | sum of square deviations: 3167929937.2811227
[2025-06-03 22:36:08] 2025-06-04 02:35:53,365 | INFO     | sum of deviations: 80049538085.10135
[2025-06-03 22:36:08] 2025-06-04 02:35:53,365 | INFO     | mean x: 1748997596.8525345
[2025-06-03 22:36:08] 2025-06-04 02:35:53,365 | INFO     | mean y: 2087518.8156682027
[2025-06-03 22:36:08] 2025-06-04 02:35:53,365 | INFO     | -- intersect: -44192844980.278145
[2025-06-03 22:36:08] 2025-06-04 02:35:53,365 | INFO     | intersect: -44192844980.278145
[2025-06-03 22:36:08] 2025-06-04 02:35:53,365 | INFO     | chi2: 3.415823548066443
[2025-06-03 22:36:08] 2025-06-04 02:35:53,365 | INFO     | current chi2=3.415823548066443 (change=-0.0781590560843565 %)
[2025-06-03 22:36:08] 2025-06-04 02:35:53,365 | INFO     | right removable region: 216
[2025-06-03 22:36:08] 2025-06-04 02:35:53,366 | INFO     | sum of square deviations: 3167817087.2811227
[2025-06-03 22:36:08] 2025-06-04 02:35:53,367 | INFO     | sum of deviations: 39152665352.244255
[2025-06-03 22:36:08] 2025-06-04 02:35:53,367 | INFO     | mean x: 1748997901.8525345
[2025-06-03 22:36:08] 2025-06-04 02:35:53,367 | INFO     | mean y: 2121122.1013824884
[2025-06-03 22:36:08] 2025-06-04 02:35:53,367 | INFO     | -- intersect: -21614635043.50884
[2025-06-03 22:36:08] 2025-06-04 02:35:53,367 | INFO     | intersect: -21614635043.50884
[2025-06-03 22:36:08] 2025-06-04 02:35:53,368 | INFO     | chi2: 1.1140646822944729
[2025-06-03 22:36:08] 2025-06-04 02:35:53,368 | INFO     | current chi2=1.1140646822944729 (change=67.3596891336661 %)
[2025-06-03 22:36:08] 2025-06-04 02:35:53,368 | INFO     | sum of square deviations: 2953747343.561308
[2025-06-03 22:36:08] 2025-06-04 02:35:53,369 | INFO     | sum of deviations: 9490554148.584906
[2025-06-03 22:36:08] 2025-06-04 02:35:53,369 | INFO     | mean x: 1748998054.3726416
[2025-06-03 22:36:08] 2025-06-04 02:35:53,369 | INFO     | mean y: 2142194.169811321
[2025-06-03 22:36:08] 2025-06-04 02:35:53,369 | INFO     | -- intersect: -5617485624.362555
[2025-06-03 22:36:08] 2025-06-04 02:35:53,369 | INFO     | intersect: -5617485624.362555
[2025-06-03 22:36:08] 2025-06-04 02:35:53,370 | INFO     | chi2: 0.1693717346629585
[2025-06-03 22:36:08] 2025-06-04 02:35:53,370 | INFO     | current chi2=0.1693717346629585 (change=84.79695682353659 %)
[2025-06-03 22:36:08] 2025-06-04 02:35:53,370 | INFO     | sum of square deviations: 2749538249.661847
[2025-06-03 22:36:08] 2025-06-04 02:35:53,371 | INFO     | sum of deviations: 7691631912.256036
[2025-06-03 22:36:08] 2025-06-04 02:35:53,371 | INFO     | mean x: 1748998206.89372
[2025-06-03 22:36:08] 2025-06-04 02:35:53,371 | INFO     | mean y: 2143507.966183575
[2025-06-03 22:36:08] 2025-06-04 02:35:53,372 | INFO     | -- intersect: -4890550901.459398
[2025-06-03 22:36:08] 2025-06-04 02:35:53,372 | INFO     | intersect: -4890550901.459398
[2025-06-03 22:36:08] 2025-06-04 02:35:53,372 | INFO     | chi2: 0.14436374978371883
[2025-06-03 22:36:08] 2025-06-04 02:35:53,372 | INFO     | current chi2=0.14436374978371883 (change=14.765146574783767 %)
[2025-06-03 22:36:08] 2025-06-04 02:35:53,372 | INFO     | left removable region: 30
[2025-06-03 22:36:08] 2025-06-04 02:35:53,372 | INFO     | sum of square deviations: 1994425300.4946144
[2025-06-03 22:36:08] 2025-06-04 02:35:53,373 | INFO     | sum of deviations: 11249418095.677422
[2025-06-03 22:36:08] 2025-06-04 02:35:53,374 | INFO     | mean x: 1748998481.4946237
[2025-06-03 22:36:08] 2025-06-04 02:35:53,374 | INFO     | mean y: 2136011.1774193547
[2025-06-03 22:36:08] 2025-06-04 02:35:53,374 | INFO     | -- intersect: -9862969070.551403
[2025-06-03 22:36:08] 2025-06-04 02:35:53,374 | INFO     | intersect: -9862969070.551403
[2025-06-03 22:36:08] 2025-06-04 02:35:53,374 | INFO     | chi2: 0.10308898514182105
[2025-06-03 22:36:08] 2025-06-04 02:35:53,374 | INFO     | -- intersect: -9862969070.551403
[2025-06-03 22:36:08] 2025-06-04 02:35:53,374 | INFO     | current memory leak: 5.64 B/s (using 186 data points, chi2=0.10)
[2025-06-03 22:36:08] 2025-06-04 02:35:53,375 | INFO     | ..............................
[2025-06-03 22:36:08] 2025-06-04 02:35:53,375 | INFO     | . Timing measurements:
[2025-06-03 22:36:08] 2025-06-04 02:35:53,375 | INFO     | . get job = 0 s
[2025-06-03 22:36:08] 2025-06-04 02:35:53,375 | INFO     | . initial setup = 2 s
[2025-06-03 22:36:08] 2025-06-04 02:35:53,375 | INFO     | . payload setup = 5 s
[2025-06-03 22:36:08] 2025-06-04 02:35:53,375 | INFO     | . stage-in = 0 s
[2025-06-03 22:36:08] 2025-06-04 02:35:53,375 | INFO     | . payload execution = 13533 s
[2025-06-03 22:36:08] 2025-06-04 02:35:53,375 | INFO     | . stage-out = 2 s
[2025-06-03 22:36:08] 2025-06-04 02:35:53,375 | INFO     | . log creation = 0 s
[2025-06-03 22:36:08] 2025-06-04 02:35:53,376 | INFO     | ..............................
[2025-06-03 22:36:08] 2025-06-04 02:35:53,480 | INFO     | 
[2025-06-03 22:36:08] 2025-06-04 02:35:53,481 | INFO     | job summary report
[2025-06-03 22:36:08] 2025-06-04 02:35:53,481 | INFO     | --------------------------------------------------
[2025-06-03 22:36:08] 2025-06-04 02:35:53,481 | INFO     | PanDA job id: 6677976592
[2025-06-03 22:36:08] 2025-06-04 02:35:53,481 | INFO     | task id: 45006595
[2025-06-03 22:36:08] 2025-06-04 02:35:53,481 | INFO     | errors: (none)
[2025-06-03 22:36:08] 2025-06-04 02:35:53,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:36:08] 2025-06-04 02:35:53,481 | INFO     | pilot state: finished 
[2025-06-03 22:36:08] 2025-06-04 02:35:53,481 | INFO     | transexitcode: 0
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | exeerrorcode: 0
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | exeerrordiag: 
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | exitcode: 0
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | exitmsg: OK
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | cpuconsumptiontime: 33999 s
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | nevents: 400
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | neventsw: 0
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | pid: 1818094
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | pgrp: 1818094
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | corecount: 8
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | event service: False
[2025-06-03 22:36:08] 2025-06-04 02:35:53,482 | INFO     | sizes: {0: 2404957, 1: 2405212, 5: 2405418, 12: 2405474, 13543: 2435952, 13546: 2444893, 13548: 2445077, 13554: 2445247}
[2025-06-03 22:36:08] 2025-06-04 02:35:53,483 | INFO     | --------------------------------------------------
[2025-06-03 22:36:08] 2025-06-04 02:35:53,483 | INFO     | 
[2025-06-03 22:36:08] 2025-06-04 02:35:53,483 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 22:36:08] 2025-06-04 02:35:53,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,504 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,504 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,504 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,505 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:36:08] 2025-06-04 02:35:53,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:36:08] 2025-06-04 02:35:53,506 | INFO     | job 6677976592 has completed (purged errors)
[2025-06-03 22:36:08] 2025-06-04 02:35:53,506 | INFO     | overall cleanup function is called
[2025-06-03 22:36:08] 2025-06-04 02:35:54,516 | INFO     | --- collectZombieJob: --- 10, [1818094]
[2025-06-03 22:36:08] 2025-06-04 02:35:54,516 | INFO     | zombie collector waiting for pid 1818094
[2025-06-03 22:36:08] 2025-06-04 02:35:54,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:36:08] 2025-06-04 02:35:54,517 | INFO     | collected zombie processes
[2025-06-03 22:36:08] 2025-06-04 02:35:54,517 | INFO     | will attempt to kill all subprocesses of pid=1818094
[2025-06-03 22:36:08] 2025-06-04 02:35:54,862 | INFO     | process IDs to be killed: [1818094] (in reverse order)
[2025-06-03 22:36:08] 2025-06-04 02:35:54,955 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:36:08] 2025-06-04 02:35:54,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:36:08] 2025-06-04 02:35:54,966 | INFO     | did not find any defunct processes belonging to 1818094
[2025-06-03 22:36:08] 2025-06-04 02:35:54,977 | INFO     | did not find any defunct processes belonging to 1818094
[2025-06-03 22:36:08] 2025-06-04 02:35:54,977 | INFO     | ready for new job
[2025-06-03 22:36:08] 2025-06-04 02:35:54,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:36:08] 2025-06-04 02:35:54,979 | INFO     | **************************************
[2025-06-03 22:36:08] 2025-06-04 02:35:54,980 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:36:08] 2025-06-04 02:35:54,980 | INFO     | **************************************
[2025-06-03 22:36:08] 2025-06-04 02:35:54,980 | INFO     | 
[2025-06-03 22:36:08] 2025-06-04 02:35:54,995 | INFO     | architecture information:
[2025-06-03 22:36:08] 2025-06-04 02:35:54,995 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:36:08] 2025-06-04 02:35:55,012 | INFO     | cat /etc/os-release:
[2025-06-03 22:36:08] NAME="CentOS Linux"
[2025-06-03 22:36:08] VERSION="7 (Core)"
[2025-06-03 22:36:08] ID="centos"
[2025-06-03 22:36:08] ID_LIKE="rhel fedora"
[2025-06-03 22:36:08] VERSION_ID="7"
[2025-06-03 22:36:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:36:08] ANSI_COLOR="0;31"
[2025-06-03 22:36:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:36:08] HOME_URL="https://www.centos.org/"
[2025-06-03 22:36:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:36:08] 
[2025-06-03 22:36:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:36:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:36:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:36:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:36:08] 
[2025-06-03 22:36:08] 2025-06-04 02:35:55,013 | INFO     | **************************************
[2025-06-03 22:36:08] 2025-06-04 02:35:55,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 22:36:08] 2025-06-04 02:35:55,554 | INFO     | sufficient remaining disk space (56019124224 B)
[2025-06-03 22:36:08] 2025-06-04 02:35:55,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:36:08] 2025-06-04 02:35:55,554 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:36:08] 2025-06-04 02:35:55,555 | INFO     | update_server=False
[2025-06-03 22:36:08] 2025-06-04 02:35:55,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:36:08] 2025-06-04 02:35:55,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:36:08] 2025-06-04 02:35:55,555 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 22:36:08] 2025-06-04 02:35:55,555 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:36:08] 2025-06-04 02:35:55,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:36:08] 2025-06-04 02:35:55,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:36:08] 2025-06-04 02:35:55,562 | INFO     | all payload control threads have been joined
[2025-06-03 22:36:08] 2025-06-04 02:35:56,113 | INFO     | all job control threads have been joined
[2025-06-03 22:36:08] 2025-06-04 02:35:56,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:36:08] 2025-06-04 02:35:56,246 | INFO     | aborting loop
[2025-06-03 22:36:08] 2025-06-04 02:35:56,560 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:56,568 | INFO     | [payload] control thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:56,572 | INFO     | all data control threads have been joined
[2025-06-03 22:36:08] 2025-06-04 02:35:57,119 | INFO     | [job] control thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,201 | INFO     | [job] validate thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,224 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,272 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,325 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,326 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,448 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,561 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,578 | INFO     | [data] control thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,656 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,811 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:57,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:36:08] 2025-06-04 02:35:57,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:35:58,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:36:08] 2025-06-04 02:35:59,509 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:36:01,829 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:36:08] 2025-06-04 02:36:02,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010112448320)>', '<ExcThread(monitor, started 140009332000512)>']
[2025-06-03 22:36:08] 2025-06-04 02:36:02,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:36:08] 2025-06-04 02:36:02,595 | INFO     | [monitor] control thread has ended
[2025-06-03 22:36:08] 2025-06-04 02:36:07,039 | INFO     | all workflow threads have been joined
[2025-06-03 22:36:08] 2025-06-04 02:36:07,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:36:08] 2025-06-04 02:36:07,040 | INFO     | traces error code: 0
[2025-06-03 22:36:08] 2025-06-04 02:36:07,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:36:08] 2025-06-04 02:36:07,530 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:36:08] 2025-06-04 02:36:07,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:36:08] 2025-06-04 02:36:07,609 [wrapper] pilotpid: 1811384
[2025-06-03 22:36:08] 2025-06-04 02:36:07,647 [wrapper] Pilot exit status: 0
[2025-06-03 22:36:08] 2025-06-04 02:36:07,772 [wrapper] pandaids: 6677976592
[2025-06-03 22:36:08] 2025-06-04 02:36:08,106 [wrapper] cleanup supervisor_pilot 2863452 1811385
[2025-06-03 22:36:08] 2025-06-04 02:36:08,109 [wrapper] Test setup, not cleaning
[2025-06-03 22:36:08] 2025-06-04 02:36:08,112 [wrapper] apfmon messages muted
[2025-06-03 22:36:08] 2025-06-04 02:36:08,114 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:36:08] 2025-06-04 02:36:08,117 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:36:08]  *** Error codes and diagnostics ***
[2025-06-03 22:36:08]     "exeErrorCode": 0,
[2025-06-03 22:36:08]     "exeErrorDiag": "",
[2025-06-03 22:36:08]     "pilotErrorCode": 0,
[2025-06-03 22:36:08]     "pilotErrorDiag": "",
[2025-06-03 22:36:08]  *** Listing of results directory ***
[2025-06-03 22:36:08] total 388776
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:08 queuedata.json
[2025-06-03 22:36:08] -rwx------. 1 boincer umatlas     37140 Jun  3 15:09 runpilot2-wrapper.sh
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas       100 Jun  3 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:36:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 18:49 run_atlas
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas       105 Jun  3 18:49 job.xml
[2025-06-03 22:36:08] -rw-r--r--. 2 boincer umatlas 217084415 Jun  3 18:49 EVNT.45006593._001736.pool.root.1
[2025-06-03 22:36:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:49 start_atlas.sh
[2025-06-03 22:36:08] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 18:49 shared
[2025-06-03 22:36:08] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 18:49 input.tar.gz
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas         0 Jun  3 18:49 boinc_lockfile
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 18:49 pandaJob.out
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas    986861 Jun  3 18:49 agis_schedconf.cvmfs.json
[2025-06-03 22:36:08] drwx------. 4 boincer umatlas      4096 Jun  3 18:49 pilot3
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas      6841 Jun  3 22:31 init_data.xml
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas 174006357 Jun  3 22:35 HITS.45006595._043319.pool.root.1
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas       529 Jun  3 22:35 boinc_task_state.xml
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas        27 Jun  3 22:35 wrapper_checkpoint.txt
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas      1038 Jun  3 22:35 memory_monitor_summary.json
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas   1603667 Jun  3 22:35 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas    398956 Jun  3 22:35 log.45006595._043319.job.log.tgz.1
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas        95 Jun  3 22:35 pilot_heartbeat.json
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas      7718 Jun  3 22:35 heartbeat.json
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas      4476 Jun  3 22:36 pilotlog.txt
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 22:36 boinc_mmap_file
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas   1187061 Jun  3 22:36 log.45006595._043319.job.log.1
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas       357 Jun  3 22:36 output.list
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas       620 Jun  3 22:36 runtime_log
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas   1607680 Jun  3 22:36 result.tar.gz
[2025-06-03 22:36:08] -rw-------. 1 boincer umatlas       656 Jun  3 22:36 xMdLDmzBmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwgZKDmMCyain.diag
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas      8665 Jun  3 22:36 runtime_log.err
[2025-06-03 22:36:08] -rw-r--r--. 1 boincer umatlas     20944 Jun  3 22:36 stderr.txt
[2025-06-03 22:36:28] HITS file was successfully produced:
[2025-06-03 22:36:28] -rw-------. 1 boincer umatlas 174006357 Jun  3 22:35 shared/HITS.pool.root.1
[2025-06-03 22:36:28]  *** Contents of shared directory: ***
[2025-06-03 22:36:28] total 384028
[2025-06-03 22:36:28] -rw-r--r--. 2 boincer umatlas 217084415 Jun  3 18:49 ATLAS.root_0
[2025-06-03 22:36:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:49 start_atlas.sh
[2025-06-03 22:36:28] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 18:49 input.tar.gz
[2025-06-03 22:36:28] -rw-------. 1 boincer umatlas 174006357 Jun  3 22:35 HITS.pool.root.1
[2025-06-03 22:36:28] -rw-------. 1 boincer umatlas   1607680 Jun  3 22:36 result.tar.gz
22:36:30 (1807767): run_atlas exited; CPU time 34501.073810
22:36:30 (1807767): called boinc_finish(0)

</stderr_txt>
]]>

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