Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:24:34 (22066): wrapper (7.7.26015): starting
09:24:34 (22066): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:24:34] Arguments: --nthreads 8
[2025-06-04 09:24:34] Threads: 8
[2025-06-04 09:24:34] Checking for CVMFS
[2025-06-04 09:24:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:24:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:24:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:24:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:24:36] 2.11.2.0 18967 33000 94584 146772 0 16 23397305 25165825 3909 130560 0 16866620 99.815 18709769 2478 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 09:24:36] CVMFS is ok
[2025-06-04 09:24:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:24:36] Checking for apptainer binary...
[2025-06-04 09:24:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:24:36] Running /usr/bin/apptainer --version
[2025-06-04 09:24:36] apptainer version 1.3.2-1.el7
[2025-06-04 09:24:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:24:47] cg-vwn474.simple-grid.lan
[2025-06-04 09:24:47] apptainer works
[2025-06-04 09:24:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:24:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:24:48] Starting ATLAS job with PandaID=6677976628
[2025-06-04 09:24:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:30:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:30:42] 2025-06-04 11:01:38,842 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:30:42] 2025-06-04 11:01:38,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:30:42] 2025-06-04 11:01:38,842 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:30:42] 2025-06-04 11:01:38,842 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:30:42] 2025-06-04 11:01:38,847 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:30:42] 2025-06-04 11:01:38,847 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 13:30:42] 2025-06-04 11:01:38,849 | INFO     | sum of deviations: 40498737774.00003
[2025-06-04 13:30:42] 2025-06-04 11:01:38,849 | INFO     | mean x: 1749028684.0
[2025-06-04 13:30:42] 2025-06-04 11:01:38,849 | INFO     | mean y: 2451204.7910447763
[2025-06-04 13:30:42] 2025-06-04 11:01:38,849 | INFO     | -- intersect: -28128380543.000114
[2025-06-04 13:30:42] 2025-06-04 11:01:38,849 | INFO     | intersect: -28128380543.000114
[2025-06-04 13:30:42] 2025-06-04 11:01:38,849 | INFO     | chi2: 6.531874738791524
[2025-06-04 13:30:42] 2025-06-04 11:01:38,850 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 13:30:42] 2025-06-04 11:01:38,851 | INFO     | sum of deviations: 52792002992.000015
[2025-06-04 13:30:42] 2025-06-04 11:01:38,852 | INFO     | mean x: 1749028531.5
[2025-06-04 13:30:42] 2025-06-04 11:01:38,852 | INFO     | mean y: 2461211.673469388
[2025-06-04 13:30:42] 2025-06-04 11:01:38,852 | INFO     | -- intersect: -39546010105.075645
[2025-06-04 13:30:42] 2025-06-04 11:01:38,852 | INFO     | intersect: -39546010105.075645
[2025-06-04 13:30:42] 2025-06-04 11:01:38,852 | INFO     | chi2: 5.833739771957735
[2025-06-04 13:30:42] 2025-06-04 11:01:38,852 | INFO     | current chi2=5.833739771957735 (change=10.688125457882753 %)
[2025-06-04 13:30:42] 2025-06-04 11:01:38,852 | INFO     | right removable region: 195
[2025-06-04 13:30:42] 2025-06-04 11:01:38,853 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 13:30:42] 2025-06-04 11:01:38,854 | INFO     | sum of deviations: -28488912563.499992
[2025-06-04 13:30:42] 2025-06-04 11:01:38,854 | INFO     | mean x: 1749028836.5
[2025-06-04 13:30:42] 2025-06-04 11:01:38,854 | INFO     | mean y: 2508539.5663265307
[2025-06-04 13:30:42] 2025-06-04 11:01:38,854 | INFO     | -- intersect: 21344626170.70152
[2025-06-04 13:30:42] 2025-06-04 11:01:38,855 | INFO     | intersect: 21344626170.70152
[2025-06-04 13:30:42] 2025-06-04 11:01:38,855 | INFO     | chi2: 1.7725560751626936
[2025-06-04 13:30:42] 2025-06-04 11:01:38,855 | INFO     | current chi2=1.7725560751626936 (change=72.86298121064951 %)
[2025-06-04 13:30:42] 2025-06-04 11:01:38,855 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 13:30:42] 2025-06-04 11:01:38,857 | INFO     | sum of deviations: -51382208872.99999
[2025-06-04 13:30:42] 2025-06-04 11:01:38,857 | INFO     | mean x: 1749028989.0
[2025-06-04 13:30:42] 2025-06-04 11:01:38,857 | INFO     | mean y: 2528381.670157068
[2025-06-04 13:30:42] 2025-06-04 11:01:38,857 | INFO     | -- intersect: 41597722655.67794
[2025-06-04 13:30:42] 2025-06-04 11:01:38,857 | INFO     | intersect: 41597722655.67794
[2025-06-04 13:30:42] 2025-06-04 11:01:38,858 | INFO     | chi2: 0.9807959729410112
[2025-06-04 13:30:42] 2025-06-04 11:01:38,858 | INFO     | current chi2=0.9807959729410112 (change=44.66770407525815 %)
[2025-06-04 13:30:42] 2025-06-04 11:01:38,858 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 13:30:42] 2025-06-04 11:01:38,859 | INFO     | sum of deviations: -48007248757.99999
[2025-06-04 13:30:42] 2025-06-04 11:01:38,859 | INFO     | mean x: 1749029141.5
[2025-06-04 13:30:42] 2025-06-04 11:01:38,860 | INFO     | mean y: 2525230.9677419355
[2025-06-04 13:30:42] 2025-06-04 11:01:38,860 | INFO     | -- intersect: 42084795395.193794
[2025-06-04 13:30:42] 2025-06-04 11:01:38,860 | INFO     | intersect: 42084795395.193794
[2025-06-04 13:30:42] 2025-06-04 11:01:38,860 | INFO     | chi2: 0.9716262352659032
[2025-06-04 13:30:42] 2025-06-04 11:01:38,860 | INFO     | current chi2=0.9716262352659032 (change=0.93492815306038 %)
[2025-06-04 13:30:42] 2025-06-04 11:01:38,860 | INFO     | left removable region: 30
[2025-06-04 13:30:42] 2025-06-04 11:01:38,861 | INFO     | sum of square deviations: 1392881930.0
[2025-06-04 13:30:42] 2025-06-04 11:01:38,862 | INFO     | sum of deviations: -16647179563.0
[2025-06-04 13:30:42] 2025-06-04 11:01:38,862 | INFO     | mean x: 1749029416.0
[2025-06-04 13:30:42] 2025-06-04 11:01:38,862 | INFO     | mean y: 2518789.187878788
[2025-06-04 13:30:42] 2025-06-04 11:01:38,862 | INFO     | -- intersect: 20906233685.626392
[2025-06-04 13:30:42] 2025-06-04 11:01:38,862 | INFO     | intersect: 20906233685.626392
[2025-06-04 13:30:42] 2025-06-04 11:01:38,862 | INFO     | chi2: 0.1377516963455537
[2025-06-04 13:30:42] 2025-06-04 11:01:38,862 | INFO     | -- intersect: 20906233685.626392
[2025-06-04 13:30:42] 2025-06-04 11:01:38,863 | INFO     | current memory leak: -11.95 B/s (using 165 data points, chi2=0.14)
[2025-06-04 13:30:42] 2025-06-04 11:01:38,863 | INFO     | ..............................
[2025-06-04 13:30:42] 2025-06-04 11:01:38,863 | INFO     | . Timing measurements:
[2025-06-04 13:30:42] 2025-06-04 11:01:38,864 | INFO     | . get job = 0 s
[2025-06-04 13:30:42] 2025-06-04 11:01:38,864 | INFO     | . initial setup = 6 s
[2025-06-04 13:30:42] 2025-06-04 11:01:38,864 | INFO     | . payload setup = 165 s
[2025-06-04 13:30:42] 2025-06-04 11:01:38,864 | INFO     | . stage-in = 0 s
[2025-06-04 13:30:42] 2025-06-04 11:01:38,864 | INFO     | . payload execution = 12376 s
[2025-06-04 13:30:42] 2025-06-04 11:01:38,864 | INFO     | . stage-out = 2 s
[2025-06-04 13:30:42] 2025-06-04 11:01:38,864 | INFO     | . log creation = 0 s
[2025-06-04 13:30:42] 2025-06-04 11:01:38,864 | INFO     | ..............................
[2025-06-04 13:30:42] 2025-06-04 11:01:39,193 | INFO     | 
[2025-06-04 13:30:42] 2025-06-04 11:01:39,193 | INFO     | job summary report
[2025-06-04 13:30:42] 2025-06-04 11:01:39,193 | INFO     | --------------------------------------------------
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | PanDA job id: 6677976628
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | task id: 45006595
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | errors: (none)
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | pilot state: finished 
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | transexitcode: 0
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | exeerrorcode: 0
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | exeerrordiag: 
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | exitcode: 0
[2025-06-04 13:30:42] 2025-06-04 11:01:39,194 | INFO     | exitmsg: OK
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | cpuconsumptiontime: 45792 s
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | nevents: 400
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | neventsw: 0
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | pid: 32598
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | pgrp: 32598
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | corecount: 8
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | event service: False
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | sizes: {0: 2404957, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 76: 2405508, 87: 2405564, 94: 2405798, 98: 2406106, 1
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | --------------------------------------------------
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | 
[2025-06-04 13:30:42] 2025-06-04 11:01:39,195 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 13:30:42] 2025-06-04 11:01:39,574 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,574 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:30:42] 2025-06-04 11:01:39,576 | INFO     | job 6677976628 has completed (purged errors)
[2025-06-04 13:30:42] 2025-06-04 11:01:39,576 | INFO     | overall cleanup function is called
[2025-06-04 13:30:42] 2025-06-04 11:01:40,585 | INFO     | --- collectZombieJob: --- 10, [32598]
[2025-06-04 13:30:42] 2025-06-04 11:01:40,585 | INFO     | zombie collector waiting for pid 32598
[2025-06-04 13:30:42] 2025-06-04 11:01:40,586 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:30:42] 2025-06-04 11:01:40,586 | INFO     | collected zombie processes
[2025-06-04 13:30:42] 2025-06-04 11:01:40,586 | INFO     | will attempt to kill all subprocesses of pid=32598
[2025-06-04 13:30:42] 2025-06-04 11:01:40,699 | INFO     | process IDs to be killed: [32598] (in reverse order)
[2025-06-04 13:30:42] 2025-06-04 11:01:41,095 | INFO     | PID=25982 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 13:30:42] 2025-06-04 11:01:41,095 | INFO     | .. there are 9 such processes running
[2025-06-04 13:30:42] 2025-06-04 11:01:41,448 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:30:42] 2025-06-04 11:01:41,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:30:42] 2025-06-04 11:01:41,451 | INFO     | did not find any defunct processes belonging to 32598
[2025-06-04 13:30:42] 2025-06-04 11:01:41,454 | INFO     | did not find any defunct processes belonging to 32598
[2025-06-04 13:30:42] 2025-06-04 11:01:41,454 | INFO     | ready for new job
[2025-06-04 13:30:42] 2025-06-04 11:01:41,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:30:42] 2025-06-04 11:01:41,456 | INFO     | **************************************
[2025-06-04 13:30:42] 2025-06-04 11:01:41,457 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:30:42] 2025-06-04 11:01:41,457 | INFO     | **************************************
[2025-06-04 13:30:42] 2025-06-04 11:01:41,457 | INFO     | 
[2025-06-04 13:30:42] 2025-06-04 11:01:41,457 | INFO     | pilot is running in a VM
[2025-06-04 13:30:42] 2025-06-04 11:01:41,457 | INFO     | architecture information:
[2025-06-04 13:30:42] 2025-06-04 11:01:41,466 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:30:42] 2025-06-04 11:01:41,724 | INFO     | cat /etc/os-release:
[2025-06-04 13:30:42] NAME="CentOS Linux"
[2025-06-04 13:30:42] VERSION="7 (Core)"
[2025-06-04 13:30:42] ID="centos"
[2025-06-04 13:30:42] ID_LIKE="rhel fedora"
[2025-06-04 13:30:42] VERSION_ID="7"
[2025-06-04 13:30:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:30:42] ANSI_COLOR="0;31"
[2025-06-04 13:30:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:30:42] HOME_URL="https://www.centos.org/"
[2025-06-04 13:30:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:30:42] 
[2025-06-04 13:30:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:30:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:30:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:30:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:30:42] 
[2025-06-04 13:30:42] 2025-06-04 11:01:41,724 | INFO     | **************************************
[2025-06-04 13:30:42] 2025-06-04 11:01:42,228 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 13:30:42] 2025-06-04 11:01:42,526 | INFO     | sufficient remaining disk space (496773365760 B)
[2025-06-04 13:30:42] 2025-06-04 11:01:42,526 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:30:42] 2025-06-04 11:01:42,526 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:30:42] 2025-06-04 11:01:42,526 | INFO     | update_server=False
[2025-06-04 13:30:42] 2025-06-04 11:01:42,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:30:42] 2025-06-04 11:01:42,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:30:42] 2025-06-04 11:01:43,034 | INFO     | all data control threads have been joined
[2025-06-04 13:30:42] 2025-06-04 11:01:43,102 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:30:42] 2025-06-04 11:01:43,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:30:42] 2025-06-04 11:01:43,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:30:42] 2025-06-04 11:01:43,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:30:42] 2025-06-04 11:01:43,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:30:42] 2025-06-04 11:01:43,507 | INFO     | aborting loop
[2025-06-04 13:30:42] 2025-06-04 11:01:43,532 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:43,648 | INFO     | all job control threads have been joined
[2025-06-04 13:30:42] 2025-06-04 11:01:43,679 | INFO     | [job] validate thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:43,721 | INFO     | all payload control threads have been joined
[2025-06-04 13:30:42] 2025-06-04 11:01:44,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:30:42] 2025-06-04 11:01:44,040 | INFO     | [data] control thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,206 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,339 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,513 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,534 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,654 | INFO     | [job] control thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,727 | INFO     | [payload] control thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,763 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,771 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,846 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,920 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:44,987 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:45,014 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:47,286 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:30:42] 2025-06-04 11:01:47,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139882445879104)>', '<ExcThread(monitor, started 139882135525120)>']
[2025-06-04 13:30:42] 2025-06-04 11:01:48,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:30:42] 2025-06-04 11:01:48,131 | INFO     | [monitor] control thread has ended
[2025-06-04 13:30:42] 2025-06-04 11:01:52,834 | INFO     | all workflow threads have been joined
[2025-06-04 13:30:42] 2025-06-04 11:01:52,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:30:42] 2025-06-04 11:01:52,835 | INFO     | traces error code: 0
[2025-06-04 13:30:42] 2025-06-04 11:01:52,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:30:42] 2025-06-04 11:01:53,133 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:30:42] 2025-06-04 11:01:53,173 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:30:42] 2025-06-04 11:01:53,208 [wrapper] pilotpid: 25982
[2025-06-04 13:30:42] 2025-06-04 11:01:53,295 [wrapper] Pilot exit status: 0
[2025-06-04 13:30:42] 2025-06-04 11:01:53,736 [wrapper] pandaids: 6677976628
[2025-06-04 13:30:42] 2025-06-04 11:01:54,692 [wrapper] cleanup supervisor_pilot  1783 25983
[2025-06-04 13:30:42] 2025-06-04 11:01:54,702 [wrapper] Test setup, not cleaning
[2025-06-04 13:30:42] 2025-06-04 11:01:54,760 [wrapper] apfmon messages muted
[2025-06-04 13:30:42] 2025-06-04 11:01:54,793 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:30:42] 2025-06-04 11:01:54,829 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:30:42]  *** Error codes and diagnostics ***
[2025-06-04 13:30:42]     "exeErrorCode": 0,
[2025-06-04 13:30:42]     "exeErrorDiag": "",
[2025-06-04 13:30:42]     "pilotErrorCode": 0,
[2025-06-04 13:30:42]     "pilotErrorDiag": "",
[2025-06-04 13:30:42]  *** Listing of results directory ***
[2025-06-04 13:30:42] total 393036
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 13:30:42] -rwx------. 1 boinc boinc     37140 Jun  3 21:07 runpilot2-wrapper.sh
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:07 queuedata.json
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc       100 Jun  4 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:30:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 09:24 run_atlas
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc       105 Jun  4 09:24 job.xml
[2025-06-04 13:30:42] -rw-r--r--. 2 boinc boinc 215827880 Jun  4 09:24 EVNT.45006593._001738.pool.root.1
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc      6392 Jun  4 09:24 init_data.xml
[2025-06-04 13:30:42] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:24 start_atlas.sh
[2025-06-04 13:30:42] drwxrwx--x. 2 boinc boinc        68 Jun  4 09:24 shared
[2025-06-04 13:30:42] -rw-r--r--. 2 boinc boinc    508878 Jun  4 09:24 input.tar.gz
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc         0 Jun  4 09:24 boinc_lockfile
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc      2525 Jun  4 09:24 pandaJob.out
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc    986745 Jun  4 09:27 agis_schedconf.cvmfs.json
[2025-06-04 13:30:42] drwx------. 4 boinc boinc      4096 Jun  4 09:28 pilot3
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc 179890613 Jun  4 12:58 HITS.45006595._043354.pool.root.1
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc       531 Jun  4 12:59 boinc_task_state.xml
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc      1014 Jun  4 13:00 memory_monitor_summary.json
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc   1603667 Jun  4 13:00 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc    367066 Jun  4 13:00 log.45006595._043354.job.log.tgz.1
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc        95 Jun  4 13:00 pilot_heartbeat.json
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc      7702 Jun  4 13:01 heartbeat.json
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc      4416 Jun  4 13:01 pilotlog.txt
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc   1093852 Jun  4 13:01 log.45006595._043354.job.log.1
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc       357 Jun  4 13:01 output.list
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:01 runtime_log
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc   1484800 Jun  4 13:01 result.tar.gz
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc      8659 Jun  4 13:01 runtime_log.err
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc       657 Jun  4 13:01 Ea2LDmr9lg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOfZKDmemCW5m.diag
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc      8192 Jun  4 13:30 boinc_mmap_file
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc        28 Jun  4 13:30 wrapper_checkpoint.txt
[2025-06-04 13:30:42] -rw-r--r--. 1 boinc boinc     20595 Jun  4 13:30 stderr.txt
[2025-06-04 13:30:42] HITS file was successfully produced:
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc 179890613 Jun  4 12:58 shared/HITS.pool.root.1
[2025-06-04 13:30:42]  *** Contents of shared directory: ***
[2025-06-04 13:30:42] total 388416
[2025-06-04 13:30:42] -rw-r--r--. 2 boinc boinc 215827880 Jun  4 09:24 ATLAS.root_0
[2025-06-04 13:30:42] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:24 start_atlas.sh
[2025-06-04 13:30:42] -rw-r--r--. 2 boinc boinc    508878 Jun  4 09:24 input.tar.gz
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc 179890613 Jun  4 12:58 HITS.pool.root.1
[2025-06-04 13:30:42] -rw-------. 1 boinc boinc   1484800 Jun  4 13:01 result.tar.gz
13:30:44 (22066): run_atlas exited; CPU time 45952.152266
13:30:44 (22066): called boinc_finish(0)

</stderr_txt>
]]>

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