Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
11:26:13 (1691351): wrapper (7.7.26015): starting
11:26:13 (1691351): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 11:26:13] Arguments: --nthreads 12
[2025-06-05 11:26:13] Threads: 12
[2025-06-05 11:26:13] Checking for CVMFS
[2025-06-05 11:26:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:26:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:26:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:26:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:26:13] 2.12.7.0 600724 3860 59364 146814 0 55 3832979 4096000 0 130560 0 3032070 99.991 917299 244 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 11:26:13] CVMFS is ok
[2025-06-05 11:26:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:26:13] Checking for apptainer binary...
[2025-06-05 11:26:13] apptainer is not installed, using version from CVMFS
[2025-06-05 11:26:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:26:13] lithium
[2025-06-05 11:26:13] apptainer works
[2025-06-05 11:26:13] Set ATHENA_PROC_NUMBER=12
[2025-06-05 11:26:13] Set ATHENA_CORE_NUMBER=12
[2025-06-05 11:26:13] Starting ATLAS job with PandaID=6677975787
[2025-06-05 11:26:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:53:32]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:53:32] 2025-06-05 10:52:28,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:31,128 | INFO     | monitor loop #395: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:31,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:33,632 | INFO     | monitor loop #396: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:33,632 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:36,136 | INFO     | monitor loop #397: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:36,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:36,334 | INFO     | PID=1695070 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 12:53:32] 2025-06-05 10:52:38,641 | INFO     | monitor loop #398: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:38,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:41,145 | INFO     | monitor loop #399: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:41,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:43,649 | INFO     | monitor loop #400: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:43,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:46,152 | INFO     | monitor loop #401: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:46,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:48,654 | INFO     | monitor loop #402: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:48,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:51,158 | INFO     | monitor loop #403: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:51,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:53,661 | INFO     | monitor loop #404: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:53,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:56,165 | INFO     | monitor loop #405: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:56,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:52:58,505 | INFO     | PID=1695070 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 12:53:32] 2025-06-05 10:52:58,669 | INFO     | monitor loop #406: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:52:58,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:53:01,173 | INFO     | monitor loop #407: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:53:01,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:53:03,677 | INFO     | monitor loop #408: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:53:03,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:53:06,178 | INFO     | monitor loop #409: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:53:06,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:53:08,682 | INFO     | monitor loop #410: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:53:08,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:53:11,186 | INFO     | monitor loop #411: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:53:11,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:53:13,534 | INFO     | 5210s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 12:53:32] 2025-06-05 10:53:13,689 | INFO     | monitor loop #412: job 0:6677975787 is in state 'finished'
[2025-06-05 12:53:32] 2025-06-05 10:53:13,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:53:32] 2025-06-05 10:53:14,515 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 12:53:32] 2025-06-05 10:53:14,516 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6677975787/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:53:32] 2025-06-05 10:53:14,517 | INFO     | extracted standard info from prmon json
[2025-06-05 12:53:32] 2025-06-05 10:53:14,517 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:53:32] 2025-06-05 10:53:14,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:53:32] 2025-06-05 10:53:14,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:53:32] 2025-06-05 10:53:14,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:53:32] 2025-06-05 10:53:14,519 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:53:32] 2025-06-05 10:53:14,519 | INFO     | sum of square deviations: 141539398.0
[2025-06-05 12:53:32] 2025-06-05 10:53:14,520 | INFO     | sum of deviations: -16607181253.0
[2025-06-05 12:53:32] 2025-06-05 10:53:14,520 | INFO     | mean x: 1749118234.0
[2025-06-05 12:53:32] 2025-06-05 10:53:14,520 | INFO     | mean y: 2916022.298701299
[2025-06-05 12:53:32] 2025-06-05 10:53:14,520 | INFO     | -- intersect: 205231452779.00632
[2025-06-05 12:53:32] 2025-06-05 10:53:14,520 | INFO     | intersect: 205231452779.00632
[2025-06-05 12:53:32] 2025-06-05 10:53:14,520 | INFO     | chi2: 0.10849682451715105
[2025-06-05 12:53:32] 2025-06-05 10:53:14,520 | INFO     | -- intersect: 205231452779.00632
[2025-06-05 12:53:32] 2025-06-05 10:53:14,520 | INFO     | current memory leak: -117.33 B/s (using 77 data points, chi2=0.11)
[2025-06-05 12:53:32] 2025-06-05 10:53:14,521 | INFO     | ..............................
[2025-06-05 12:53:32] 2025-06-05 10:53:14,521 | INFO     | . Timing measurements:
[2025-06-05 12:53:32] 2025-06-05 10:53:14,521 | INFO     | . get job = 0 s
[2025-06-05 12:53:32] 2025-06-05 10:53:14,521 | INFO     | . initial setup = 1 s
[2025-06-05 12:53:32] 2025-06-05 10:53:14,521 | INFO     | . payload setup = 9 s
[2025-06-05 12:53:32] 2025-06-05 10:53:14,521 | INFO     | . stage-in = 0 s
[2025-06-05 12:53:32] 2025-06-05 10:53:14,521 | INFO     | . payload execution = 5097 s
[2025-06-05 12:53:32] 2025-06-05 10:53:14,522 | INFO     | . stage-out = 0 s
[2025-06-05 12:53:32] 2025-06-05 10:53:14,522 | INFO     | . log creation = 0 s
[2025-06-05 12:53:32] 2025-06-05 10:53:14,522 | INFO     | ..............................
[2025-06-05 12:53:32] 2025-06-05 10:53:14,604 | INFO     | 
[2025-06-05 12:53:32] 2025-06-05 10:53:14,604 | INFO     | job summary report
[2025-06-05 12:53:32] 2025-06-05 10:53:14,604 | INFO     | --------------------------------------------------
[2025-06-05 12:53:32] 2025-06-05 10:53:14,605 | INFO     | PanDA job id: 6677975787
[2025-06-05 12:53:32] 2025-06-05 10:53:14,605 | INFO     | task id: 45006595
[2025-06-05 12:53:32] 2025-06-05 10:53:14,605 | INFO     | errors: (none)
[2025-06-05 12:53:32] 2025-06-05 10:53:14,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:53:32] 2025-06-05 10:53:14,605 | INFO     | pilot state: finished 
[2025-06-05 12:53:32] 2025-06-05 10:53:14,605 | INFO     | transexitcode: 0
[2025-06-05 12:53:32] 2025-06-05 10:53:14,605 | INFO     | exeerrorcode: 0
[2025-06-05 12:53:32] 2025-06-05 10:53:14,605 | INFO     | exeerrordiag: 
[2025-06-05 12:53:32] 2025-06-05 10:53:14,605 | INFO     | exitcode: 0
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | exitmsg: OK
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | cpuconsumptiontime: 56656 s
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | nevents: 400
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | neventsw: 0
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | pid: 1701726
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | pgrp: 1701726
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | corecount: 12
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | event service: False
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | sizes: {0: 2397178, 1: 2397377, 4: 2397583, 11: 2397611, 5110: 2432705, 5112: 2432705, 5196: 2433003}
[2025-06-05 12:53:32] 2025-06-05 10:53:14,606 | INFO     | --------------------------------------------------
[2025-06-05 12:53:32] 2025-06-05 10:53:14,607 | INFO     | 
[2025-06-05 12:53:32] 2025-06-05 10:53:14,607 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 12:53:32] 2025-06-05 10:53:14,623 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,623 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,624 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,625 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:53:32] 2025-06-05 10:53:14,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,625 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:53:32] 2025-06-05 10:53:14,625 | INFO     | job 6677975787 has completed (purged errors)
[2025-06-05 12:53:32] 2025-06-05 10:53:14,626 | INFO     | overall cleanup function is called
[2025-06-05 12:53:32] 2025-06-05 10:53:15,629 | INFO     | --- collectZombieJob: --- 10, [1701726]
[2025-06-05 12:53:32] 2025-06-05 10:53:15,630 | INFO     | zombie collector waiting for pid 1701726
[2025-06-05 12:53:32] 2025-06-05 10:53:15,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:53:32] 2025-06-05 10:53:15,630 | INFO     | collected zombie processes
[2025-06-05 12:53:32] 2025-06-05 10:53:15,630 | INFO     | will attempt to kill all subprocesses of pid=1701726
[2025-06-05 12:53:32] 2025-06-05 10:53:15,712 | INFO     | process IDs to be killed: [1701726] (in reverse order)
[2025-06-05 12:53:32] 2025-06-05 10:53:15,757 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:53:32] 2025-06-05 10:53:15,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:53:32] 2025-06-05 10:53:15,760 | INFO     | did not find any defunct processes belonging to 1701726
[2025-06-05 12:53:32] 2025-06-05 10:53:15,763 | INFO     | did not find any defunct processes belonging to 1701726
[2025-06-05 12:53:32] 2025-06-05 10:53:15,763 | INFO     | ready for new job
[2025-06-05 12:53:32] 2025-06-05 10:53:15,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:53:32] 2025-06-05 10:53:15,764 | INFO     | **************************************
[2025-06-05 12:53:32] 2025-06-05 10:53:15,764 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:53:32] 2025-06-05 10:53:15,764 | INFO     | **************************************
[2025-06-05 12:53:32] 2025-06-05 10:53:15,764 | INFO     | 
[2025-06-05 12:53:32] 2025-06-05 10:53:15,782 | INFO     | architecture information:
[2025-06-05 12:53:32] 2025-06-05 10:53:15,783 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:53:32] 2025-06-05 10:53:15,794 | INFO     | cat /etc/os-release:
[2025-06-05 12:53:32] NAME="CentOS Linux"
[2025-06-05 12:53:32] VERSION="7 (Core)"
[2025-06-05 12:53:32] ID="centos"
[2025-06-05 12:53:32] ID_LIKE="rhel fedora"
[2025-06-05 12:53:32] VERSION_ID="7"
[2025-06-05 12:53:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:53:32] ANSI_COLOR="0;31"
[2025-06-05 12:53:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:53:32] HOME_URL="https://www.centos.org/"
[2025-06-05 12:53:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:53:32] 
[2025-06-05 12:53:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:53:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:53:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:53:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:53:32] 
[2025-06-05 12:53:32] 2025-06-05 10:53:15,794 | INFO     | **************************************
[2025-06-05 12:53:32] 2025-06-05 10:53:16,297 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 12:53:32] 2025-06-05 10:53:16,310 | INFO     | sufficient remaining disk space (33085718528 B)
[2025-06-05 12:53:32] 2025-06-05 10:53:16,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:53:32] 2025-06-05 10:53:16,310 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:53:32] 2025-06-05 10:53:16,311 | INFO     | update_server=False
[2025-06-05 12:53:32] 2025-06-05 10:53:16,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:53:32] 2025-06-05 10:53:16,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:53:32] 2025-06-05 10:53:16,509 | INFO     | all payload control threads have been joined
[2025-06-05 12:53:32] 2025-06-05 10:53:16,545 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:53:32] 2025-06-05 10:53:16,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:53:32] 2025-06-05 10:53:16,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:53:32] 2025-06-05 10:53:16,630 | INFO     | all data control threads have been joined
[2025-06-05 12:53:32] 2025-06-05 10:53:17,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:53:32] 2025-06-05 10:53:17,198 | INFO     | aborting loop
[2025-06-05 12:53:32] 2025-06-05 10:53:17,313 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:17,316 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:17,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:53:32] 2025-06-05 10:53:17,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:53:32] 2025-06-05 10:53:17,515 | INFO     | [payload] control thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:17,633 | INFO     | [data] control thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:17,735 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:17,803 | INFO     | all job control threads have been joined
[2025-06-05 12:53:32] 2025-06-05 10:53:18,025 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:18,138 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:18,204 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:18,385 | INFO     | [job] validate thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:18,551 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:18,619 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:18,631 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:18,809 | INFO     | [job] control thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:19,338 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:21,518 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:26,425 | INFO     | job.realtimelogging is not enabled
[2025-06-05 12:53:32] 2025-06-05 10:53:27,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:53:32] 2025-06-05 10:53:27,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644992681792)>', '<ExcThread(monitor, started 140644332857088)>']
[2025-06-05 12:53:32] 2025-06-05 10:53:28,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:53:32] 2025-06-05 10:53:28,599 | INFO     | [monitor] control thread has ended
[2025-06-05 12:53:32] 2025-06-05 10:53:32,693 | INFO     | all workflow threads have been joined
[2025-06-05 12:53:32] 2025-06-05 10:53:32,694 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:53:32] 2025-06-05 10:53:32,694 | INFO     | traces error code: 0
[2025-06-05 12:53:32] 2025-06-05 10:53:32,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:53:32] 2025-06-05 10:53:32,783 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:53:32] 2025-06-05 10:53:32,785 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:53:32] 2025-06-05 10:53:32,787 [wrapper] pilotpid: 1695070
[2025-06-05 12:53:32] 2025-06-05 10:53:32,789 [wrapper] Pilot exit status: 0
[2025-06-05 12:53:32] 2025-06-05 10:53:32,797 [wrapper] pandaids: 6677975787
[2025-06-05 12:53:32] 2025-06-05 10:53:32,823 [wrapper] cleanup supervisor_pilot 1713497 1695071
[2025-06-05 12:53:32] 2025-06-05 10:53:32,825 [wrapper] Test setup, not cleaning
[2025-06-05 12:53:32] 2025-06-05 10:53:32,827 [wrapper] apfmon messages muted
[2025-06-05 12:53:32] 2025-06-05 10:53:32,829 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:53:32] 2025-06-05 10:53:32,831 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:53:32]  *** Error codes and diagnostics ***
[2025-06-05 12:53:32]     "exeErrorCode": 0,
[2025-06-05 12:53:32]     "exeErrorDiag": "",
[2025-06-05 12:53:32]     "pilotErrorCode": 0,
[2025-06-05 12:53:32]     "pilotErrorDiag": "",
[2025-06-05 12:53:32]  *** Listing of results directory ***
[2025-06-05 12:53:32] total 389512
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:58 queuedata.json
[2025-06-05 12:53:32] -rwx------ 1 boinc boinc     37140 Jun  3 21:00 runpilot2-wrapper.sh
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc       100 Jun  5 11:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:53:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 11:26 run_atlas
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc       105 Jun  5 11:26 job.xml
[2025-06-05 12:53:32] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:26 start_atlas.sh
[2025-06-05 12:53:32] drwxrwx--x 2 boinc boinc      4096 Jun  5 11:26 shared
[2025-06-05 12:53:32] -rw-r--r-- 2 boinc boinc    508879 Jun  5 11:26 input.tar.gz
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc      6048 Jun  5 11:26 init_data.xml
[2025-06-05 12:53:32] -rw-r--r-- 2 boinc boinc 213274933 Jun  5 11:26 EVNT.45006593._001718.pool.root.1
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc         0 Jun  5 11:26 boinc_lockfile
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc      2525 Jun  5 11:26 pandaJob.out
[2025-06-05 12:53:32] -rw------- 1 boinc boinc    983289 Jun  5 11:26 agis_schedconf.cvmfs.json
[2025-06-05 12:53:32] -rw------- 1 boinc boinc   1598969 Jun  5 11:26 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:53:32] drwx------ 4 boinc boinc      4096 Jun  5 11:26 pilot3
[2025-06-05 12:53:32] -rw------- 1 boinc boinc 180044013 Jun  5 12:51 HITS.45006595._042878.pool.root.1
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc       529 Jun  5 12:51 boinc_task_state.xml
[2025-06-05 12:53:32] -rw------- 1 boinc boinc      1062 Jun  5 12:51 memory_monitor_summary.json
[2025-06-05 12:53:32] -rw------- 1 boinc boinc    361804 Jun  5 12:51 log.45006595._042878.job.log.tgz.1
[2025-06-05 12:53:32] -rw------- 1 boinc boinc        95 Jun  5 12:53 pilot_heartbeat.json
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc      8192 Jun  5 12:53 boinc_mmap_file
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc        27 Jun  5 12:53 wrapper_checkpoint.txt
[2025-06-05 12:53:32] -rw------- 1 boinc boinc      7738 Jun  5 12:53 heartbeat.json
[2025-06-05 12:53:32] -rw------- 1 boinc boinc      4432 Jun  5 12:53 pilotlog.txt
[2025-06-05 12:53:32] -rw------- 1 boinc boinc    491083 Jun  5 12:53 log.45006595._042878.job.log.1
[2025-06-05 12:53:32] -rw------- 1 boinc boinc       357 Jun  5 12:53 output.list
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc       620 Jun  5 12:53 runtime_log
[2025-06-05 12:53:32] -rw------- 1 boinc boinc    870400 Jun  5 12:53 result.tar.gz
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc      8716 Jun  5 12:53 runtime_log.err
[2025-06-05 12:53:32] -rw------- 1 boinc boinc       653 Jun  5 12:53 i7pKDmr2lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmunlKDmHIjjHo.diag
[2025-06-05 12:53:32] -rw-r--r-- 1 boinc boinc     22198 Jun  5 12:53 stderr.txt
[2025-06-05 12:53:32] HITS file was successfully produced:
[2025-06-05 12:53:32] -rw------- 1 boinc boinc 180044013 Jun  5 12:51 shared/HITS.pool.root.1
[2025-06-05 12:53:32]  *** Contents of shared directory: ***
[2025-06-05 12:53:32] total 385484
[2025-06-05 12:53:32] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:26 start_atlas.sh
[2025-06-05 12:53:32] -rw-r--r-- 2 boinc boinc    508879 Jun  5 11:26 input.tar.gz
[2025-06-05 12:53:32] -rw-r--r-- 2 boinc boinc 213274933 Jun  5 11:26 ATLAS.root_0
[2025-06-05 12:53:32] -rw------- 1 boinc boinc 180044013 Jun  5 12:51 HITS.pool.root.1
[2025-06-05 12:53:32] -rw------- 1 boinc boinc    870400 Jun  5 12:53 result.tar.gz
12:53:34 (1691351): run_atlas exited; CPU time 56516.720898
12:53:34 (1691351): called boinc_finish(0)

</stderr_txt>
]]>

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