Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:37:31 (8315): wrapper (7.7.26015): starting
08:37:31 (8315): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:37:31] Arguments: --nthreads 8
[2025-06-04 08:37:31] Threads: 8
[2025-06-04 08:37:31] Checking for CVMFS
[2025-06-04 08:37:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:37:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:37:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:37:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:37:34] 2.11.2.0 13961 32879 92716 146770 3 328 12598457 25165825 3524 130560 0 16773495 99.765 19741927 2340 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 08:37:34] CVMFS is ok
[2025-06-04 08:37:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:37:34] Checking for apptainer binary...
[2025-06-04 08:37:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:37:34] Running /usr/bin/apptainer --version
[2025-06-04 08:37:34] apptainer version 1.3.2-1.el7
[2025-06-04 08:37:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:37:37] cg-vwn452.simple-grid.lan
[2025-06-04 08:37:37] apptainer works
[2025-06-04 08:37:37] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:37:37] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:37:37] Starting ATLAS job with PandaID=6677975687
[2025-06-04 08:37:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:47:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:47:37] 2025-06-04 10:46:18,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:47:37] 2025-06-04 10:46:18,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:47:37] 2025-06-04 10:46:18,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:47:37] 2025-06-04 10:46:18,782 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:47:37] 2025-06-04 10:46:18,783 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,785 | INFO     | sum of deviations: 90166278554.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,785 | INFO     | mean x: 1749026798.5
[2025-06-04 12:47:37] 2025-06-04 10:46:18,785 | INFO     | mean y: 2423805.1982758623
[2025-06-04 12:47:37] 2025-06-04 10:46:18,785 | INFO     | -- intersect: -40726815540.4052
[2025-06-04 12:47:37] 2025-06-04 10:46:18,786 | INFO     | intersect: -40726815540.4052
[2025-06-04 12:47:37] 2025-06-04 10:46:18,786 | INFO     | chi2: 7.074400800447059
[2025-06-04 12:47:37] 2025-06-04 10:46:18,787 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,789 | INFO     | sum of deviations: 103394111901.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,789 | INFO     | mean x: 1749026646.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,789 | INFO     | mean y: 2431872.4801762113
[2025-06-04 12:47:37] 2025-06-04 10:46:18,789 | INFO     | -- intersect: -49856694642.038795
[2025-06-04 12:47:37] 2025-06-04 10:46:18,789 | INFO     | intersect: -49856694642.038795
[2025-06-04 12:47:37] 2025-06-04 10:46:18,790 | INFO     | chi2: 6.364459584941738
[2025-06-04 12:47:37] 2025-06-04 10:46:18,790 | INFO     | current chi2=6.364459584941738 (change=10.035354732240458 %)
[2025-06-04 12:47:37] 2025-06-04 10:46:18,790 | INFO     | right removable region: 226
[2025-06-04 12:47:37] 2025-06-04 10:46:18,790 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,793 | INFO     | sum of deviations: 11283154261.999998
[2025-06-04 12:47:37] 2025-06-04 10:46:18,793 | INFO     | mean x: 1749026951.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,793 | INFO     | mean y: 2472865.704845815
[2025-06-04 12:47:37] 2025-06-04 10:46:18,793 | INFO     | -- intersect: -5438536332.891684
[2025-06-04 12:47:37] 2025-06-04 10:46:18,793 | INFO     | intersect: -5438536332.891684
[2025-06-04 12:47:37] 2025-06-04 10:46:18,794 | INFO     | chi2: 2.3394029993235916
[2025-06-04 12:47:37] 2025-06-04 10:46:18,794 | INFO     | current chi2=2.3394029993235916 (change=66.93143256492118 %)
[2025-06-04 12:47:37] 2025-06-04 10:46:18,794 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 12:47:37] 2025-06-04 10:46:18,796 | INFO     | sum of deviations: -28295632264.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,797 | INFO     | mean x: 1749027103.5
[2025-06-04 12:47:37] 2025-06-04 10:46:18,797 | INFO     | mean y: 2498449.918918919
[2025-06-04 12:47:37] 2025-06-04 10:46:18,797 | INFO     | -- intersect: 14590218054.535164
[2025-06-04 12:47:37] 2025-06-04 10:46:18,797 | INFO     | intersect: 14590218054.535164
[2025-06-04 12:47:37] 2025-06-04 10:46:18,797 | INFO     | chi2: 0.9229078928628975
[2025-06-04 12:47:37] 2025-06-04 10:46:18,797 | INFO     | current chi2=0.9229078928628975 (change=60.549426792658444 %)
[2025-06-04 12:47:37] 2025-06-04 10:46:18,798 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,800 | INFO     | sum of deviations: -28858593944.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,800 | INFO     | mean x: 1749027256.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,800 | INFO     | mean y: 2498785.728110599
[2025-06-04 12:47:37] 2025-06-04 10:46:18,800 | INFO     | -- intersect: 15932776326.962849
[2025-06-04 12:47:37] 2025-06-04 10:46:18,800 | INFO     | intersect: 15932776326.962849
[2025-06-04 12:47:37] 2025-06-04 10:46:18,801 | INFO     | chi2: 0.8990426041028023
[2025-06-04 12:47:37] 2025-06-04 10:46:18,801 | INFO     | current chi2=0.8990426041028023 (change=2.585879798477409 %)
[2025-06-04 12:47:37] 2025-06-04 10:46:18,801 | INFO     | left removable region: 30
[2025-06-04 12:47:37] 2025-06-04 10:46:18,801 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,803 | INFO     | sum of deviations: 4917966948.999999
[2025-06-04 12:47:37] 2025-06-04 10:46:18,803 | INFO     | mean x: 1749027530.5
[2025-06-04 12:47:37] 2025-06-04 10:46:18,803 | INFO     | mean y: 2494437.326530612
[2025-06-04 12:47:37] 2025-06-04 10:46:18,804 | INFO     | -- intersect: -3681737122.0258975
[2025-06-04 12:47:37] 2025-06-04 10:46:18,804 | INFO     | intersect: -3681737122.0258975
[2025-06-04 12:47:37] 2025-06-04 10:46:18,804 | INFO     | chi2: 0.0008686041818187266
[2025-06-04 12:47:37] 2025-06-04 10:46:18,804 | INFO     | -- intersect: -3681737122.0258975
[2025-06-04 12:47:37] 2025-06-04 10:46:18,804 | INFO     | current memory leak: 2.11 B/s (using 196 data points, chi2=0.00)
[2025-06-04 12:47:37] 2025-06-04 10:46:18,805 | INFO     | ..............................
[2025-06-04 12:47:37] 2025-06-04 10:46:18,805 | INFO     | . Timing measurements:
[2025-06-04 12:47:37] 2025-06-04 10:46:18,806 | INFO     | . get job = 0 s
[2025-06-04 12:47:37] 2025-06-04 10:46:18,806 | INFO     | . initial setup = 7 s
[2025-06-04 12:47:37] 2025-06-04 10:46:18,806 | INFO     | . payload setup = 180 s
[2025-06-04 12:47:37] 2025-06-04 10:46:18,806 | INFO     | . stage-in = 0 s
[2025-06-04 12:47:37] 2025-06-04 10:46:18,806 | INFO     | . payload execution = 14278 s
[2025-06-04 12:47:37] 2025-06-04 10:46:18,806 | INFO     | . stage-out = 4 s
[2025-06-04 12:47:37] 2025-06-04 10:46:18,806 | INFO     | . log creation = 1 s
[2025-06-04 12:47:37] 2025-06-04 10:46:18,806 | INFO     | ..............................
[2025-06-04 12:47:37] 2025-06-04 10:46:18,992 | INFO     | 
[2025-06-04 12:47:37] 2025-06-04 10:46:18,992 | INFO     | job summary report
[2025-06-04 12:47:37] 2025-06-04 10:46:18,992 | INFO     | --------------------------------------------------
[2025-06-04 12:47:37] 2025-06-04 10:46:18,992 | INFO     | PanDA job id: 6677975687
[2025-06-04 12:47:37] 2025-06-04 10:46:18,993 | INFO     | task id: 45006595
[2025-06-04 12:47:37] 2025-06-04 10:46:18,993 | INFO     | errors: (none)
[2025-06-04 12:47:37] 2025-06-04 10:46:18,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:47:37] 2025-06-04 10:46:18,993 | INFO     | pilot state: finished 
[2025-06-04 12:47:37] 2025-06-04 10:46:18,993 | INFO     | transexitcode: 0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,993 | INFO     | exeerrorcode: 0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,993 | INFO     | exeerrordiag: 
[2025-06-04 12:47:37] 2025-06-04 10:46:18,993 | INFO     | exitcode: 0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,994 | INFO     | exitmsg: OK
[2025-06-04 12:47:37] 2025-06-04 10:46:18,994 | INFO     | cpuconsumptiontime: 52919 s
[2025-06-04 12:47:37] 2025-06-04 10:46:18,994 | INFO     | nevents: 400
[2025-06-04 12:47:37] 2025-06-04 10:46:18,994 | INFO     | neventsw: 0
[2025-06-04 12:47:37] 2025-06-04 10:46:18,994 | INFO     | pid: 20638
[2025-06-04 12:47:37] 2025-06-04 10:46:18,994 | INFO     | pgrp: 20638
[2025-06-04 12:47:37] 2025-06-04 10:46:18,994 | INFO     | corecount: 8
[2025-06-04 12:47:37] 2025-06-04 10:46:18,994 | INFO     | event service: False
[2025-06-04 12:47:37] 2025-06-04 10:46:18,994 | INFO     | sizes: {0: 2404299, 1: 2405155, 2: 2405183, 12: 2405183, 23: 2405211, 34: 2405239, 45: 2405395, 55: 2405423, 66: 2405451, 77: 2405479, 86: 2405741, 88: 2406049, 14
[2025-06-04 12:47:37] 2025-06-04 10:46:18,995 | INFO     | --------------------------------------------------
[2025-06-04 12:47:37] 2025-06-04 10:46:18,995 | INFO     | 
[2025-06-04 12:47:37] 2025-06-04 10:46:18,995 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 12:47:37] 2025-06-04 10:46:19,039 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,040 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,040 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,040 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,040 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,040 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,041 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,041 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,041 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,041 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,042 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:47:37] 2025-06-04 10:46:19,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,042 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:47:37] 2025-06-04 10:46:19,042 | INFO     | job 6677975687 has completed (purged errors)
[2025-06-04 12:47:37] 2025-06-04 10:46:19,042 | INFO     | overall cleanup function is called
[2025-06-04 12:47:37] 2025-06-04 10:46:20,051 | INFO     | --- collectZombieJob: --- 10, [20638]
[2025-06-04 12:47:37] 2025-06-04 10:46:20,051 | INFO     | zombie collector waiting for pid 20638
[2025-06-04 12:47:37] 2025-06-04 10:46:20,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:47:37] 2025-06-04 10:46:20,051 | INFO     | collected zombie processes
[2025-06-04 12:47:37] 2025-06-04 10:46:20,052 | INFO     | will attempt to kill all subprocesses of pid=20638
[2025-06-04 12:47:37] 2025-06-04 10:46:20,182 | INFO     | process IDs to be killed: [20638] (in reverse order)
[2025-06-04 12:47:37] 2025-06-04 10:46:20,460 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:47:37] 2025-06-04 10:46:20,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:47:37] 2025-06-04 10:46:20,465 | INFO     | did not find any defunct processes belonging to 20638
[2025-06-04 12:47:37] 2025-06-04 10:46:20,469 | INFO     | did not find any defunct processes belonging to 20638
[2025-06-04 12:47:37] 2025-06-04 10:46:20,469 | INFO     | ready for new job
[2025-06-04 12:47:37] 2025-06-04 10:46:20,470 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:47:37] 2025-06-04 10:46:20,472 | INFO     | **************************************
[2025-06-04 12:47:37] 2025-06-04 10:46:20,472 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:47:37] 2025-06-04 10:46:20,472 | INFO     | **************************************
[2025-06-04 12:47:37] 2025-06-04 10:46:20,472 | INFO     | 
[2025-06-04 12:47:37] 2025-06-04 10:46:20,473 | INFO     | pilot is running in a VM
[2025-06-04 12:47:37] 2025-06-04 10:46:20,473 | INFO     | architecture information:
[2025-06-04 12:47:37] 2025-06-04 10:46:20,477 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:47:37] 2025-06-04 10:46:20,777 | INFO     | cat /etc/os-release:
[2025-06-04 12:47:37] NAME="CentOS Linux"
[2025-06-04 12:47:37] VERSION="7 (Core)"
[2025-06-04 12:47:37] ID="centos"
[2025-06-04 12:47:37] ID_LIKE="rhel fedora"
[2025-06-04 12:47:37] VERSION_ID="7"
[2025-06-04 12:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:47:37] ANSI_COLOR="0;31"
[2025-06-04 12:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:47:37] HOME_URL="https://www.centos.org/"
[2025-06-04 12:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:47:37] 
[2025-06-04 12:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:47:37] 
[2025-06-04 12:47:37] 2025-06-04 10:46:20,778 | INFO     | **************************************
[2025-06-04 12:47:37] 2025-06-04 10:46:21,281 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 12:47:37] 2025-06-04 10:46:21,482 | INFO     | sufficient remaining disk space (496935895040 B)
[2025-06-04 12:47:37] 2025-06-04 10:46:21,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:47:37] 2025-06-04 10:46:21,482 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:47:37] 2025-06-04 10:46:21,482 | INFO     | update_server=False
[2025-06-04 12:47:37] 2025-06-04 10:46:21,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:47:37] 2025-06-04 10:46:21,483 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:47:37] 2025-06-04 10:46:21,483 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:47:37] 2025-06-04 10:46:21,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:47:37] 2025-06-04 10:46:21,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:47:37] 2025-06-04 10:46:21,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:47:37] 2025-06-04 10:46:21,582 | INFO     | all job control threads have been joined
[2025-06-04 12:47:37] 2025-06-04 10:46:21,926 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 12:47:37] 2025-06-04 10:46:21,926 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 12:47:37] 2025-06-04 10:46:21,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:47:37] 2025-06-04 10:46:21,927 | INFO     | will abort loop
[2025-06-04 12:47:37] 2025-06-04 10:46:22,011 | INFO     | all data control threads have been joined
[2025-06-04 12:47:37] 2025-06-04 10:46:22,488 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:22,588 | INFO     | [job] control thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:22,592 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:22,863 | INFO     | [job] validate thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:22,932 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:22,949 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:22,961 | INFO     | all payload control threads have been joined
[2025-06-04 12:47:37] 2025-06-04 10:46:23,017 | INFO     | [data] control thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:23,244 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:23,442 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:23,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:23,495 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:23,549 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:23,967 | INFO     | [payload] control thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:23,988 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:24,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:47:37] 2025-06-04 10:46:24,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:47:37] 2025-06-04 10:46:25,012 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:28,589 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:47:37] 2025-06-04 10:46:30,575 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160155952960)>', '<ExcThread(monitor, started 140159345489664)>']
[2025-06-04 12:47:37] 2025-06-04 10:46:31,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:47:37] 2025-06-04 10:46:31,542 | INFO     | [monitor] control thread has ended
[2025-06-04 12:47:37] 2025-06-04 10:46:35,601 | INFO     | all workflow threads have been joined
[2025-06-04 12:47:37] 2025-06-04 10:46:35,601 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:47:37] 2025-06-04 10:46:35,602 | INFO     | traces error code: 0
[2025-06-04 12:47:37] 2025-06-04 10:46:35,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:47:37] 2025-06-04 10:46:35,978 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:47:37] 2025-06-04 10:46:36,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:47:37] 2025-06-04 10:46:36,130 [wrapper] pilotpid: 12017
[2025-06-04 12:47:37] 2025-06-04 10:46:36,192 [wrapper] Pilot exit status: 0
[2025-06-04 12:47:37] 2025-06-04 10:46:36,625 [wrapper] pandaids: 6677975687
[2025-06-04 12:47:37] 2025-06-04 10:46:37,052 [wrapper] cleanup supervisor_pilot  9958 12018
[2025-06-04 12:47:37] 2025-06-04 10:46:37,102 [wrapper] Test setup, not cleaning
[2025-06-04 12:47:37] 2025-06-04 10:46:37,140 [wrapper] apfmon messages muted
[2025-06-04 12:47:37] 2025-06-04 10:46:37,185 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:47:37] 2025-06-04 10:46:37,212 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:47:37]  *** Error codes and diagnostics ***
[2025-06-04 12:47:37]     "exeErrorCode": 0,
[2025-06-04 12:47:37]     "exeErrorDiag": "",
[2025-06-04 12:47:37]     "pilotErrorCode": 0,
[2025-06-04 12:47:37]     "pilotErrorDiag": "",
[2025-06-04 12:47:37]  *** Listing of results directory ***
[2025-06-04 12:47:37] total 396620
[2025-06-04 12:47:37] -rwx------. 1 boinc boinc     37140 Jun  3 20:54 runpilot2-wrapper.sh
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:54 queuedata.json
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:54 pilot3.tar.gz
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc       100 Jun  4 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:47:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 08:37 run_atlas
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc       105 Jun  4 08:37 job.xml
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc      6390 Jun  4 08:37 init_data.xml
[2025-06-04 12:47:37] -rw-r--r--. 2 boinc boinc 214615596 Jun  4 08:37 EVNT.45006593._000355.pool.root.1
[2025-06-04 12:47:37] -rw-r--r--. 2 boinc boinc     15093 Jun  4 08:37 start_atlas.sh
[2025-06-04 12:47:37] drwxrwx--x. 2 boinc boinc        68 Jun  4 08:37 shared
[2025-06-04 12:47:37] -rw-r--r--. 2 boinc boinc    508879 Jun  4 08:37 input.tar.gz
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc         0 Jun  4 08:37 boinc_lockfile
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc      2521 Jun  4 08:37 pandaJob.out
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc    986745 Jun  4 08:40 agis_schedconf.cvmfs.json
[2025-06-04 12:47:37] drwx------. 4 boinc boinc      4096 Jun  4 08:40 pilot3
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc 184421149 Jun  4 12:43 HITS.45006595._042779.pool.root.1
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc       531 Jun  4 12:44 boinc_task_state.xml
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc      1014 Jun  4 12:44 memory_monitor_summary.json
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc   1603667 Jun  4 12:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc    389911 Jun  4 12:44 log.45006595._042779.job.log.tgz.1
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc        95 Jun  4 12:45 pilot_heartbeat.json
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc      7682 Jun  4 12:46 heartbeat.json
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc      4725 Jun  4 12:46 pilotlog.txt
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc   1252741 Jun  4 12:46 log.45006595._042779.job.log.1
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc       357 Jun  4 12:46 output.list
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc       620 Jun  4 12:46 runtime_log
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc   1658880 Jun  4 12:46 result.tar.gz
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc      8659 Jun  4 12:46 runtime_log.err
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc       657 Jun  4 12:46 MVoKDmdxlg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLcZKDmz7npnm.diag
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:47 boinc_mmap_file
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:47 wrapper_checkpoint.txt
[2025-06-04 12:47:37] -rw-r--r--. 1 boinc boinc     20532 Jun  4 12:47 stderr.txt
[2025-06-04 12:47:37] HITS file was successfully produced:
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc 184421149 Jun  4 12:43 shared/HITS.pool.root.1
[2025-06-04 12:47:37]  *** Contents of shared directory: ***
[2025-06-04 12:47:37] total 391824
[2025-06-04 12:47:37] -rw-r--r--. 2 boinc boinc 214615596 Jun  4 08:37 ATLAS.root_0
[2025-06-04 12:47:37] -rw-r--r--. 2 boinc boinc     15093 Jun  4 08:37 start_atlas.sh
[2025-06-04 12:47:37] -rw-r--r--. 2 boinc boinc    508879 Jun  4 08:37 input.tar.gz
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc 184421149 Jun  4 12:43 HITS.pool.root.1
[2025-06-04 12:47:37] -rw-------. 1 boinc boinc   1658880 Jun  4 12:46 result.tar.gz
12:47:39 (8315): run_atlas exited; CPU time 53126.289991
12:47:39 (8315): called boinc_finish(0)

</stderr_txt>
]]>

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