Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:49:30 (1240695): wrapper (7.7.26015): starting
15:49:30 (1240695): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 15:49:30] Arguments: --nthreads 12
[2025-06-03 15:49:30] Threads: 12
[2025-06-03 15:49:30] Checking for CVMFS
[2025-06-03 15:49:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:49:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:49:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:49:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:49:31] 2.11.5.0 3522937 23060 237584 146760 2 494 29205796 45568001 13103 130560 0 244151855 99.809 152718266 28592 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 15:49:31] CVMFS is ok
[2025-06-03 15:49:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:49:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:49:31] Further information can be found at the LHC@home message board.
[2025-06-03 15:49:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:49:31] Checking for apptainer binary...
[2025-06-03 15:49:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:49:31] Running /usr/bin/apptainer --version
[2025-06-03 15:49:31] apptainer version 1.4.0-1.el9
[2025-06-03 15:49:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:49:31] wns0033.triumf.lcg
[2025-06-03 15:49:31] apptainer works
[2025-06-03 15:49:32] Set ATHENA_PROC_NUMBER=12
[2025-06-03 15:49:32] Set ATHENA_CORE_NUMBER=12
[2025-06-03 15:49:32] Starting ATLAS job with PandaID=6678071612
[2025-06-03 15:49:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:53:51]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | WARNING  | wrong length of table data, x=[1748991044.0], y=[1002.0] (must be same and length>=4)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | could have reported an average CPU frequency of 2662 MHz (4 samples)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | ..............................
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . Timing measurements:
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . get job = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . initial setup = 4 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . payload setup = 9 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . stage-in = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . payload execution = 33 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . stage-out = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . log creation = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | ..............................
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071612/pilotlog.txt
[2025-06-03 15:53:51] 2025-06-03 22:53:18,641 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 15:53:51] - Log from pilotlog.txt -
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | WARNING  | found no stored workdir sizes
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | WARNING  | wrong length of table data, x=[1748991044.0], y=[1002.0] (must be same and length>=4)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | could have reported an average CPU frequency of 2662 MHz (4 samples)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | ..............................
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . Timing measurements:
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . get job = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . initial setup = 4 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . payload setup = 9 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . stage-in = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . payload execution = 33 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . stage-out = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . log creation = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | ..............................
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071612/pilotlog.txt
[2025-06-03 15:53:51] 2025-06-03 22:53:18,641 | WARNING  | 
[2025-06-03 15:53:51] [begin log extracts]
[2025-06-03 15:53:51] - Log from pilotlog.txt -
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | WARNING  | found no stored workdir sizes
[2025-06-03 15:53:51] 2025-06-03 22:53:18,621 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | WARNING  | wrong length of table data, x=[1748991044.0], y=[1002.0] (must be same and length>=4)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | could have reported an average CPU frequency of 2662 MHz (4 samples)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | ..............................
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . Timing measurements:
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . get job = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . initial setup = 4 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,622 | INFO     | . payload setup = 9 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . stage-in = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . payload execution = 33 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . stage-out = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | . log creation = 0 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | ..............................
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:53:51] 2025-06-03 22:53:18,625 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071612/pilotlog.txt
[2025-06-03 15:53:51] [end log extracts]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,642 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,642 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 15:53:51] 2025-06-03 22:53:18,930 | INFO     | 
[2025-06-03 15:53:51] 2025-06-03 22:53:18,930 | INFO     | job summary report
[2025-06-03 15:53:51] 2025-06-03 22:53:18,930 | INFO     | --------------------------------------------------
[2025-06-03 15:53:51] 2025-06-03 22:53:18,930 | INFO     | PanDA job id: 6678071612
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | task id: 45006595
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 15:50:58,312 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | pilot state: failed 
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | transexitcode: 65
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | exeerrorcode: 65
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | exitcode: 65
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | cpuconsumptiontime: 16 s
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | nevents: 0
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | neventsw: 0
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | pid: 1259673
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | pgrp: 1259673
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | corecount: 12
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | event service: False
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | sizes: {0: 2404697, 1: 2405550, 10: 2405812, 12: 2405840, 47: 2429037, 48: 2433428, 180: 2433566}
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | --------------------------------------------------
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | 
[2025-06-03 15:53:51] 2025-06-03 22:53:18,931 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,978 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,979 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,979 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:53:51] 2025-06-03 22:53:18,979 | INFO     | job 6678071612 has completed (purged errors)
[2025-06-03 15:53:51] 2025-06-03 22:53:18,979 | INFO     | overall cleanup function is called
[2025-06-03 15:53:51] 2025-06-03 22:53:19,985 | INFO     | --- collectZombieJob: --- 10, [1259673]
[2025-06-03 15:53:51] 2025-06-03 22:53:19,985 | INFO     | zombie collector waiting for pid 1259673
[2025-06-03 15:53:51] 2025-06-03 22:53:19,985 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:53:51] 2025-06-03 22:53:19,985 | INFO     | collected zombie processes
[2025-06-03 15:53:51] 2025-06-03 22:53:19,986 | INFO     | will attempt to kill all subprocesses of pid=1259673
[2025-06-03 15:53:51] 2025-06-03 22:53:20,849 | INFO     | process IDs to be killed: [1259673] (in reverse order)
[2025-06-03 15:53:51] 2025-06-03 22:53:20,935 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:53:51] 2025-06-03 22:53:20,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:53:51] 2025-06-03 22:53:20,984 | INFO     | did not find any defunct processes belonging to 1259673
[2025-06-03 15:53:51] 2025-06-03 22:53:20,991 | INFO     | did not find any defunct processes belonging to 1259673
[2025-06-03 15:53:51] 2025-06-03 22:53:20,992 | INFO     | ready for new job
[2025-06-03 15:53:51] 2025-06-03 22:53:20,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:53:51] 2025-06-03 22:53:20,993 | INFO     | ***************************************
[2025-06-03 15:53:51] 2025-06-03 22:53:20,993 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-03 15:53:51] 2025-06-03 22:53:20,993 | INFO     | ***************************************
[2025-06-03 15:53:51] 2025-06-03 22:53:20,993 | INFO     | 
[2025-06-03 15:53:51] 2025-06-03 22:53:20,995 | INFO     | architecture information:
[2025-06-03 15:53:51] 2025-06-03 22:53:20,995 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:53:51] 2025-06-03 22:53:21,034 | INFO     | cat /etc/os-release:
[2025-06-03 15:53:51] NAME="CentOS Linux"
[2025-06-03 15:53:51] VERSION="7 (Core)"
[2025-06-03 15:53:51] ID="centos"
[2025-06-03 15:53:51] ID_LIKE="rhel fedora"
[2025-06-03 15:53:51] VERSION_ID="7"
[2025-06-03 15:53:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:53:51] ANSI_COLOR="0;31"
[2025-06-03 15:53:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:53:51] HOME_URL="https://www.centos.org/"
[2025-06-03 15:53:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:53:51] 
[2025-06-03 15:53:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:53:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:53:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:53:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:53:51] 
[2025-06-03 15:53:51] 2025-06-03 22:53:21,035 | INFO     | ***************************************
[2025-06-03 15:53:51] 2025-06-03 22:53:21,538 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 15:53:51] 2025-06-03 22:53:21,593 | INFO     | sufficient remaining disk space (1893295194112 B)
[2025-06-03 15:53:51] 2025-06-03 22:53:21,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:53:51] 2025-06-03 22:53:21,594 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:53:51] 2025-06-03 22:53:21,594 | INFO     | update_server=False
[2025-06-03 15:53:51] 2025-06-03 22:53:21,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:53:51] 2025-06-03 22:53:21,744 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 15:53:51] 2025-06-03 22:53:21,744 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 15:53:51] 2025-06-03 22:53:21,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:53:51] 2025-06-03 22:53:21,745 | INFO     | will abort loop
[2025-06-03 15:53:51] 2025-06-03 22:53:21,894 | INFO     | all job control threads have been joined
[2025-06-03 15:53:51] 2025-06-03 22:53:22,251 | INFO     | all data control threads have been joined
[2025-06-03 15:53:51] 2025-06-03 22:53:22,403 | INFO     | all payload control threads have been joined
[2025-06-03 15:53:51] 2025-06-03 22:53:22,600 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:22,632 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:22,750 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:22,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:53:51] 2025-06-03 22:53:22,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:22,899 | INFO     | [job] control thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:22,987 | INFO     | [job] validate thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:23,130 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:23,251 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:23,257 | INFO     | [data] control thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:23,279 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:23,386 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:23,409 | INFO     | [payload] control thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:23,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:53:51] 2025-06-03 22:53:23,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:53:51] 2025-06-03 22:53:23,830 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:24,780 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:24,808 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:27,792 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:53:51] 2025-06-03 22:53:29,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140657372985152)>', '<ExcThread(monitor, started 140656588601088)>']
[2025-06-03 15:53:51] 2025-06-03 22:53:34,645 | INFO     | all workflow threads have been joined
[2025-06-03 15:53:51] 2025-06-03 22:53:34,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:53:51] 2025-06-03 22:53:34,645 | INFO     | traces error code: 0
[2025-06-03 15:53:51] 2025-06-03 22:53:34,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:53:51] 2025-06-03 22:53:51,189 | INFO     | PID=1248234 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 15:53:51] 2025-06-03 22:53:51,190 | INFO     | .. there are 20 such processes running
[2025-06-03 15:53:51] 2025-06-03 22:53:51,190 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:53:51] 2025-06-03 22:53:51,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:53:51] 2025-06-03 22:53:51,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:53:51] 2025-06-03 22:53:51,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:53:51] 2025-06-03 22:53:51,190 | CRITICAL | thread 'MainThread' is not alive
[2025-06-03 15:53:51] 2025-06-03 22:53:51,190 | INFO     | [monitor] control thread has ended
[2025-06-03 15:53:51] 2025-06-03 22:53:51,311 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:53:51] 2025-06-03 22:53:51,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:53:51] 2025-06-03 22:53:51,320 [wrapper] pilotpid: 1248234
[2025-06-03 15:53:51] 2025-06-03 22:53:51,323 [wrapper] Pilot exit status: 0
[2025-06-03 15:53:51] 2025-06-03 22:53:51,367 [wrapper] pandaids: 6678071612
[2025-06-03 15:53:51] 2025-06-03 22:53:51,451 [wrapper] cleanup supervisor_pilot 1248240 1248235
[2025-06-03 15:53:51] 2025-06-03 22:53:51,453 [wrapper] Test setup, not cleaning
[2025-06-03 15:53:51] 2025-06-03 22:53:51,455 [wrapper] apfmon messages muted
[2025-06-03 15:53:51] 2025-06-03 22:53:51,462 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:53:51] 2025-06-03 22:53:51,470 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:53:51]  *** Error codes and diagnostics ***
[2025-06-03 15:53:51]     "exeErrorCode": 65,
[2025-06-03 15:53:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:53:51]     "pilotErrorCode": 1305,
[2025-06-03 15:53:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:53:51]  *** Listing of results directory ***
[2025-06-03 15:53:51] total 214556
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc    549845 Jun  2 02:40 pilot3.tar.gz
[2025-06-03 15:53:51] -rwx------. 1 boinc boinc     37140 Jun  3 13:52 runpilot2-wrapper.sh
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:52 queuedata.json
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:53:51] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:49 run_atlas
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:49 job.xml
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc      6600 Jun  3 15:49 init_data.xml
[2025-06-03 15:53:51] -rw-r--r--. 2 boinc boinc 215561009 Jun  3 15:49 EVNT.45006593._001820.pool.root.1
[2025-06-03 15:53:51] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:49 start_atlas.sh
[2025-06-03 15:53:51] drwxrwx--x. 2 boinc boinc      4096 Jun  3 15:49 shared
[2025-06-03 15:53:51] -rw-r--r--. 2 boinc boinc    564113 Jun  3 15:49 input.tar.gz
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:49 boinc_lockfile
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc      2525 Jun  3 15:49 pandaJob.out
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc    986861 Jun  3 15:49 agis_schedconf.cvmfs.json
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc   1603667 Jun  3 15:50 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:53:51] drwx------. 6 boinc boinc      4096 Jun  3 15:50 pilot3
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc       521 Jun  3 15:50 boinc_task_state.xml
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc       967 Jun  3 15:51 memory_monitor_summary.json
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc     21114 Jun  3 15:51 log.45006595._045381.job.log.tgz.1
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc        95 Jun  3 15:53 pilot_heartbeat.json
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc      8340 Jun  3 15:53 heartbeat.json
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:53 boinc_mmap_file
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc        22 Jun  3 15:53 wrapper_checkpoint.txt
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc       893 Jun  3 15:53 pilotlog.txt
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc     81038 Jun  3 15:53 log.45006595._045381.job.log.1
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc       188 Jun  3 15:53 output.list
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:53 runtime_log
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc    122880 Jun  3 15:53 result.tar.gz
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc       645 Jun  3 15:53 uodLDmxnng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKwZKDm3w9Dpn.diag
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc      8484 Jun  3 15:53 runtime_log.err
[2025-06-03 15:53:51] -rw-r--r--. 1 boinc boinc     21675 Jun  3 15:53 stderr.txt
[2025-06-03 15:53:51] No HITS result produced
[2025-06-03 15:53:51]  *** Contents of shared directory: ***
[2025-06-03 15:53:51] total 211204
[2025-06-03 15:53:51] -rw-r--r--. 2 boinc boinc 215561009 Jun  3 15:49 ATLAS.root_0
[2025-06-03 15:53:51] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:49 start_atlas.sh
[2025-06-03 15:53:51] -rw-r--r--. 2 boinc boinc    564113 Jun  3 15:49 input.tar.gz
[2025-06-03 15:53:51] -rw-------. 1 boinc boinc    122880 Jun  3 15:53 result.tar.gz
15:53:53 (1240695): run_atlas exited; CPU time 22.842081
15:53:53 (1240695): called boinc_finish(0)

</stderr_txt>
]]>

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