Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:34:02 (485171): wrapper (7.7.26015): starting
18:34:02 (485171): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:34:02] Arguments: --nthreads 8
[2025-06-03 18:34:02] Threads: 8
[2025-06-03 18:34:02] Checking for CVMFS
[2025-06-03 18:34:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:34:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:34:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:34:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:34:02] 2.12.6.0 213643 31384 529624 146760 1 575 29397114 40960001 22545 16776704 0 384043666 99.753 240142461 23128 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 18:34:02] CVMFS is ok
[2025-06-03 18:34:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:34:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:34:02] Further information can be found at the LHC@home message board.
[2025-06-03 18:34:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:34:02] Checking for apptainer binary...
[2025-06-03 18:34:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:34:02] Running /usr/bin/apptainer --version
[2025-06-03 18:34:02] apptainer version 1.4.1-1.el9
[2025-06-03 18:34:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:34:02] c7-2-17.aglt2.org
[2025-06-03 18:34:02] apptainer works
[2025-06-03 18:34:02] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:34:02] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:34:02] Starting ATLAS job with PandaID=6677975891
[2025-06-03 18:34:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:28:53]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:28:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 19:28:53]  is_altstaged=None
[2025-06-03 19:28:53]  is_tar=False
[2025-06-03 19:28:53]  lfn=log.45006595._042982.job.log.tgz.1
[2025-06-03 19:28:53]  mtime=0
[2025-06-03 19:28:53]  protocol_id=None
[2025-06-03 19:28:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 19:28:53]  replicas=None
[2025-06-03 19:28:53]  scope=mc23_13p6TeV
[2025-06-03 19:28:53]  status=None
[2025-06-03 19:28:53]  status_code=0
[2025-06-03 19:28:53]  storage_token=
[2025-06-03 19:28:53]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677975891/log.45006595._042982.job.log.tgz.1
[2025-06-03 19:28:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/19/log.45006595._042982.job.log.tgz.1
[2025-06-03 19:28:53]  workdir=None
[2025-06-03 19:28:53] ]
[2025-06-03 19:28:53] 2025-06-03 23:28:27,365 | INFO     | transferring file log.45006595._042982.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677975891/log.45006595._042982.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 19:28:53] 2025-06-03 23:28:27,366 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677975891/log.45006595._042982.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._042982.job
[2025-06-03 19:28:53] 2025-06-03 23:28:27,380 | INFO     | adding to output.list: log.45006595._042982.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/19/log.45006595._042982.job.log.tg
[2025-06-03 19:28:53] 2025-06-03 23:28:27,380 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 19:28:53] 2025-06-03 23:28:27,380 | INFO     | summary of transferred files:
[2025-06-03 19:28:53] 2025-06-03 23:28:27,381 | INFO     |  -- lfn=log.45006595._042982.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 19:28:53] 2025-06-03 23:28:27,381 | INFO     | stage-out finished correctly
[2025-06-03 19:28:53] 2025-06-03 23:28:30,081 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 19:28:53] 2025-06-03 23:28:30,939 | INFO     | PID=489005 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 19:28:53] 2025-06-03 23:28:30,939 | INFO     | .. there are 32 such processes running
[2025-06-03 19:28:53] 2025-06-03 23:28:31,010 | INFO     | job 6677975891 has state=finished
[2025-06-03 19:28:53] 2025-06-03 23:28:31,010 | INFO     | preparing for final server update for job 6677975891 in state='finished'
[2025-06-03 19:28:53] 2025-06-03 23:28:31,059 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 19:28:53] 2025-06-03 23:28:31,060 | INFO     | this job has now completed (state=finished)
[2025-06-03 19:28:53] 2025-06-03 23:28:31,060 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 19:28:53] 2025-06-03 23:28:31,060 | INFO     | log transfer has been attempted: DONE
[2025-06-03 19:28:53] 2025-06-03 23:28:31,060 | INFO     | job 6677975891 has finished - writing final server update
[2025-06-03 19:28:53] 2025-06-03 23:28:31,060 | INFO     | total number of processed events: 400 (read)
[2025-06-03 19:28:53] 2025-06-03 23:28:31,075 | INFO     | executing command: lscpu
[2025-06-03 19:28:53] 2025-06-03 23:28:31,154 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 19:28:53] 2025-06-03 23:28:33,299 | WARNING  | process 507153 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 19:28:53] 2025-06-03 23:28:33,300 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677975891/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:28:53] 2025-06-03 23:28:33,611 | INFO     | number of running child processes to parent process 507153: 1
[2025-06-03 19:28:53] 2025-06-03 23:28:33,611 | INFO     | maximum number of monitored processes: 6
[2025-06-03 19:28:53] 2025-06-03 23:28:34,111 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 19:28:53] 2025-06-03 23:28:34,111 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677975891/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:28:53] 2025-06-03 23:28:34,112 | INFO     | extracted standard info from prmon json
[2025-06-03 19:28:53] 2025-06-03 23:28:34,112 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:28:53] 2025-06-03 23:28:34,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:28:53] 2025-06-03 23:28:34,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:28:53] 2025-06-03 23:28:34,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:28:53] 2025-06-03 23:28:34,113 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:28:53] 2025-06-03 23:28:34,113 | INFO     | sum of square deviations: 30168007.5
[2025-06-03 19:28:53] 2025-06-03 23:28:34,113 | INFO     | sum of deviations: 4205377484.499999
[2025-06-03 19:28:53] 2025-06-03 23:28:34,113 | INFO     | mean x: 1748991754.5
[2025-06-03 19:28:53] 2025-06-03 23:28:34,113 | INFO     | mean y: 2391087.413043478
[2025-06-03 19:28:53] 2025-06-03 23:28:34,113 | INFO     | -- intersect: -243804580418.75784
[2025-06-03 19:28:53] 2025-06-03 23:28:34,113 | INFO     | intersect: -243804580418.75784
[2025-06-03 19:28:53] 2025-06-03 23:28:34,113 | INFO     | chi2: 0.7944752225566408
[2025-06-03 19:28:53] 2025-06-03 23:28:34,113 | INFO     | -- intersect: -243804580418.75784
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | current memory leak: 139.40 B/s (using 46 data points, chi2=0.79)
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | ..............................
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | . Timing measurements:
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | . get job = 0 s
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | . initial setup = 2 s
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | . payload setup = 6 s
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | . stage-in = 0 s
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | . payload execution = 3230 s
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | . stage-out = 0 s
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | . log creation = 0 s
[2025-06-03 19:28:53] 2025-06-03 23:28:34,114 | INFO     | ..............................
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | 
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | job summary report
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | --------------------------------------------------
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | PanDA job id: 6677975891
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | task id: 45006595
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | errors: (none)
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | pilot state: finished 
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | transexitcode: 0
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | exeerrorcode: 0
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | exeerrordiag: 
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | exitcode: 0
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | exitmsg: OK
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | cpuconsumptiontime: 21249 s
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | nevents: 400
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | neventsw: 0
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | pid: 507153
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | pgrp: 507153
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | corecount: 8
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | event service: False
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 3240: 2439752, 3243: 2439752, 3247: 2439922}
[2025-06-03 19:28:53] 2025-06-03 23:28:34,206 | INFO     | --------------------------------------------------
[2025-06-03 19:28:53] 2025-06-03 23:28:34,207 | INFO     | 
[2025-06-03 19:28:53] 2025-06-03 23:28:34,207 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 19:28:53] 2025-06-03 23:28:34,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:28:53] 2025-06-03 23:28:34,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,221 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:28:53] 2025-06-03 23:28:34,221 | INFO     | job 6677975891 has completed (purged errors)
[2025-06-03 19:28:53] 2025-06-03 23:28:34,221 | INFO     | overall cleanup function is called
[2025-06-03 19:28:53] 2025-06-03 23:28:35,228 | INFO     | --- collectZombieJob: --- 10, [507153]
[2025-06-03 19:28:53] 2025-06-03 23:28:35,228 | INFO     | zombie collector waiting for pid 507153
[2025-06-03 19:28:53] 2025-06-03 23:28:35,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:28:53] 2025-06-03 23:28:35,228 | INFO     | collected zombie processes
[2025-06-03 19:28:53] 2025-06-03 23:28:35,228 | INFO     | will attempt to kill all subprocesses of pid=507153
[2025-06-03 19:28:53] 2025-06-03 23:28:35,541 | INFO     | process IDs to be killed: [507153] (in reverse order)
[2025-06-03 19:28:53] 2025-06-03 23:28:35,638 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:28:53] 2025-06-03 23:28:35,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:28:53] 2025-06-03 23:28:35,651 | INFO     | did not find any defunct processes belonging to 507153
[2025-06-03 19:28:53] 2025-06-03 23:28:35,664 | INFO     | did not find any defunct processes belonging to 507153
[2025-06-03 19:28:53] 2025-06-03 23:28:35,664 | INFO     | ready for new job
[2025-06-03 19:28:53] 2025-06-03 23:28:35,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:28:53] 2025-06-03 23:28:35,665 | INFO     | **************************************
[2025-06-03 19:28:53] 2025-06-03 23:28:35,665 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:28:53] 2025-06-03 23:28:35,665 | INFO     | **************************************
[2025-06-03 19:28:53] 2025-06-03 23:28:35,665 | INFO     | 
[2025-06-03 19:28:53] 2025-06-03 23:28:35,681 | INFO     | architecture information:
[2025-06-03 19:28:53] 2025-06-03 23:28:35,681 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:28:53] 2025-06-03 23:28:35,692 | INFO     | cat /etc/os-release:
[2025-06-03 19:28:53] NAME="CentOS Linux"
[2025-06-03 19:28:53] VERSION="7 (Core)"
[2025-06-03 19:28:53] ID="centos"
[2025-06-03 19:28:53] ID_LIKE="rhel fedora"
[2025-06-03 19:28:53] VERSION_ID="7"
[2025-06-03 19:28:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:28:53] ANSI_COLOR="0;31"
[2025-06-03 19:28:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:28:53] HOME_URL="https://www.centos.org/"
[2025-06-03 19:28:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:28:53] 
[2025-06-03 19:28:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:28:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:28:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:28:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:28:53] 
[2025-06-03 19:28:53] 2025-06-03 23:28:35,692 | INFO     | **************************************
[2025-06-03 19:28:53] 2025-06-03 23:28:36,195 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 19:28:53] 2025-06-03 23:28:36,208 | INFO     | sufficient remaining disk space (128657129472 B)
[2025-06-03 19:28:53] 2025-06-03 23:28:36,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:28:53] 2025-06-03 23:28:36,208 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:28:53] 2025-06-03 23:28:36,208 | INFO     | update_server=False
[2025-06-03 19:28:53] 2025-06-03 23:28:36,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:28:53] 2025-06-03 23:28:36,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:28:53] 2025-06-03 23:28:36,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:28:53] 2025-06-03 23:28:36,337 | INFO     | all data control threads have been joined
[2025-06-03 19:28:53] 2025-06-03 23:28:36,673 | INFO     | all job control threads have been joined
[2025-06-03 19:28:53] 2025-06-03 23:28:36,954 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:28:53] 2025-06-03 23:28:36,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:28:53] 2025-06-03 23:28:36,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:28:53] 2025-06-03 23:28:37,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:28:53] 2025-06-03 23:28:37,119 | INFO     | aborting loop
[2025-06-03 19:28:53] 2025-06-03 23:28:37,214 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:37,342 | INFO     | [data] control thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:37,571 | INFO     | all payload control threads have been joined
[2025-06-03 19:28:53] 2025-06-03 23:28:37,633 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:37,678 | INFO     | [job] control thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:38,071 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:38,124 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:38,215 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:38,215 | INFO     | [job] validate thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:38,409 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:38,433 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:38,488 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:38,550 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:38,576 | INFO     | [payload] control thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:39,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:28:53] 2025-06-03 23:28:40,167 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:40,215 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:46,277 | INFO     | job.realtimelogging is not enabled
[2025-06-03 19:28:53] 2025-06-03 23:28:47,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:28:53] 2025-06-03 23:28:47,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679030822720)>', '<ExcThread(monitor, started 140678524806912)>']
[2025-06-03 19:28:53] 2025-06-03 23:28:48,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:28:53] 2025-06-03 23:28:48,006 | INFO     | [monitor] control thread has ended
[2025-06-03 19:28:53] 2025-06-03 23:28:52,884 | INFO     | all workflow threads have been joined
[2025-06-03 19:28:53] 2025-06-03 23:28:52,884 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:28:53] 2025-06-03 23:28:52,884 | INFO     | traces error code: 0
[2025-06-03 19:28:53] 2025-06-03 23:28:52,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:28:53] 2025-06-03 23:28:52,957 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:28:53] 2025-06-03 23:28:52,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:28:53] 2025-06-03 23:28:52,961 [wrapper] pilotpid: 489005
[2025-06-03 19:28:53] 2025-06-03 23:28:52,963 [wrapper] Pilot exit status: 0
[2025-06-03 19:28:53] 2025-06-03 23:28:52,971 [wrapper] pandaids: 6677975891
[2025-06-03 19:28:53] 2025-06-03 23:28:53,041 [wrapper] cleanup supervisor_pilot  842965 489006
[2025-06-03 19:28:53] 2025-06-03 23:28:53,043 [wrapper] Test setup, not cleaning
[2025-06-03 19:28:53] 2025-06-03 23:28:53,045 [wrapper] apfmon messages muted
[2025-06-03 19:28:53] 2025-06-03 23:28:53,047 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:28:53] 2025-06-03 23:28:53,049 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:28:53]  *** Error codes and diagnostics ***
[2025-06-03 19:28:53]     "exeErrorCode": 0,
[2025-06-03 19:28:53]     "exeErrorDiag": "",
[2025-06-03 19:28:53]     "pilotErrorCode": 0,
[2025-06-03 19:28:53]     "pilotErrorDiag": "",
[2025-06-03 19:28:53]  *** Listing of results directory ***
[2025-06-03 19:28:53] total 380244
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 19:28:53] -rwx------. 1 boincer umatlas     37140 Jun  3 15:01 runpilot2-wrapper.sh
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:01 queuedata.json
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas       100 Jun  3 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:28:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 18:34 run_atlas
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas       105 Jun  3 18:34 job.xml
[2025-06-03 19:28:53] -rw-r--r--. 2 boincer umatlas 214786843 Jun  3 18:34 EVNT.45006593._001723.pool.root.1
[2025-06-03 19:28:53] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 18:34 shared
[2025-06-03 19:28:53] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 18:34 input.tar.gz
[2025-06-03 19:28:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:34 start_atlas.sh
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas         0 Jun  3 18:34 boinc_lockfile
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 18:34 pandaJob.out
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas    986861 Jun  3 18:34 agis_schedconf.cvmfs.json
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas   1603667 Jun  3 18:34 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:28:53] drwx------. 4 boincer umatlas      4096 Jun  3 18:34 pilot3
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas      6935 Jun  3 19:22 init_data.xml
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas 169490098 Jun  3 19:28 HITS.45006595._042982.pool.root.1
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas       529 Jun  3 19:28 boinc_task_state.xml
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas      1027 Jun  3 19:28 memory_monitor_summary.json
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas        95 Jun  3 19:28 pilot_heartbeat.json
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas    290080 Jun  3 19:28 log.45006595._042982.job.log.tgz.1
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas      7677 Jun  3 19:28 heartbeat.json
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas        27 Jun  3 19:28 wrapper_checkpoint.txt
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 19:28 boinc_mmap_file
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas      4426 Jun  3 19:28 pilotlog.txt
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas    337076 Jun  3 19:28 log.45006595._042982.job.log.1
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas       357 Jun  3 19:28 output.list
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas       620 Jun  3 19:28 runtime_log
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas    645120 Jun  3 19:28 result.tar.gz
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 19:28 runtime_log.err
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas       650 Jun  3 19:28 ft5MDmT4lg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9cZKDm999Jon.diag
[2025-06-03 19:28:53] -rw-r--r--. 1 boincer umatlas     21386 Jun  3 19:28 stderr.txt
[2025-06-03 19:28:53] HITS file was successfully produced:
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas 169490098 Jun  3 19:28 shared/HITS.pool.root.1
[2025-06-03 19:28:53]  *** Contents of shared directory: ***
[2025-06-03 19:28:53] total 376432
[2025-06-03 19:28:53] -rw-r--r--. 2 boincer umatlas 214786843 Jun  3 18:34 ATLAS.root_0
[2025-06-03 19:28:53] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 18:34 input.tar.gz
[2025-06-03 19:28:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:34 start_atlas.sh
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas 169490098 Jun  3 19:28 HITS.pool.root.1
[2025-06-03 19:28:53] -rw-------. 1 boincer umatlas    645120 Jun  3 19:28 result.tar.gz
19:28:54 (485171): run_atlas exited; CPU time 21329.685797
19:28:54 (485171): called boinc_finish(0)

</stderr_txt>
]]>

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