Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:49:52 (1565730): wrapper (7.7.26015): starting
15:49:52 (1565730): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 15:49:52] Arguments: --nthreads 12
[2025-06-03 15:49:52] Threads: 12
[2025-06-03 15:49:52] Checking for CVMFS
[2025-06-03 15:49:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:49:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:49:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:49:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:49:55] 2.11.5.0 238830 22401 148696 146760 2 462 41985635 45568000 39186 130560 0 245379879 99.799 154229023 18333 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 15:49:55] CVMFS is ok
[2025-06-03 15:49:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:49:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:49:55] Further information can be found at the LHC@home message board.
[2025-06-03 15:49:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:49:55] Checking for apptainer binary...
[2025-06-03 15:49:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:49:55] Running /usr/bin/apptainer --version
[2025-06-03 15:49:55] apptainer version 1.4.0-1.el9
[2025-06-03 15:49:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:49:56] wns0149.triumf.lcg
[2025-06-03 15:49:56] apptainer works
[2025-06-03 15:49:56] Set ATHENA_PROC_NUMBER=12
[2025-06-03 15:49:56] Set ATHENA_CORE_NUMBER=12
[2025-06-03 15:49:56] Starting ATLAS job with PandaID=6678071505
[2025-06-03 15:49:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:56:51]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:56:51] 2025-06-03 22:56:31,010 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 15:56:51] 2025-06-03 22:56:31,010 | INFO     | using path: /home/boinc/slots/1/PanDA_Pilot-6678071505/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,012 | INFO     | extracted standard info from prmon json
[2025-06-03 15:56:51] 2025-06-03 22:56:31,012 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:56:51] 2025-06-03 22:56:31,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:56:51] 2025-06-03 22:56:31,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:56:51] 2025-06-03 22:56:31,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:56:51] 2025-06-03 22:56:31,023 | WARNING  | wrong length of table data, x=[1748991171.0], y=[1001.0] (must be same and length>=4)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | ..............................
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . Timing measurements:
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . get job = 0 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . initial setup = 4 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . payload setup = 32 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . stage-in = 0 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . payload execution = 83 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . stage-out = 1 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,033 | INFO     | . log creation = 0 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,033 | INFO     | ..............................
[2025-06-03 15:56:51] 2025-06-03 22:56:31,033 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:56:51] 2025-06-03 22:56:31,034 | INFO     | executing command: tail -n 20 /home/boinc/slots/1/PanDA_Pilot-6678071505/pilotlog.txt
[2025-06-03 15:56:51] 2025-06-03 22:56:31,125 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 15:56:51] - Log from pilotlog.txt -
[2025-06-03 15:56:51] 2025-06-03 22:56:31,010 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 15:56:51] 2025-06-03 22:56:31,010 | INFO     | using path: /home/boinc/slots/1/PanDA_Pilot-6678071505/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,012 | INFO     | extracted standard info from prmon json
[2025-06-03 15:56:51] 2025-06-03 22:56:31,012 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:56:51] 2025-06-03 22:56:31,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:56:51] 2025-06-03 22:56:31,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:56:51] 2025-06-03 22:56:31,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:56:51] 2025-06-03 22:56:31,023 | WARNING  | wrong length of table data, x=[1748991171.0], y=[1001.0] (must be same and length>=4)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | ..............................
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . Timing measurements:
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . get job = 0 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . initial setup = 4 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . payload setup = 32 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . stage-in = 0 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . payload execution = 83 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . stage-out = 1 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,033 | INFO     | . log creation = 0 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,033 | INFO     | ..............................
[2025-06-03 15:56:51] 2025-06-03 22:56:31,033 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:56:51] 2025-06-03 22:56:31,034 | INFO     | executing command: tail -n 20 /home/boinc/slots/1/PanDA_Pilot-6678071505/pilotlog.txt
[2025-06-03 15:56:51] 2025-06-03 22:56:31,126 | WARNING  | 
[2025-06-03 15:56:51] [begin log extracts]
[2025-06-03 15:56:51] - Log from pilotlog.txt -
[2025-06-03 15:56:51] 2025-06-03 22:56:31,010 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 15:56:51] 2025-06-03 22:56:31,010 | INFO     | using path: /home/boinc/slots/1/PanDA_Pilot-6678071505/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,012 | INFO     | extracted standard info from prmon json
[2025-06-03 15:56:51] 2025-06-03 22:56:31,012 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:56:51] 2025-06-03 22:56:31,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:56:51] 2025-06-03 22:56:31,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:56:51] 2025-06-03 22:56:31,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:56:51] 2025-06-03 22:56:31,023 | WARNING  | wrong length of table data, x=[1748991171.0], y=[1001.0] (must be same and length>=4)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | ..............................
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . Timing measurements:
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . get job = 0 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . initial setup = 4 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . payload setup = 32 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . stage-in = 0 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . payload execution = 83 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,024 | INFO     | . stage-out = 1 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,033 | INFO     | . log creation = 0 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,033 | INFO     | ..............................
[2025-06-03 15:56:51] 2025-06-03 22:56:31,033 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:56:51] 2025-06-03 22:56:31,034 | INFO     | executing command: tail -n 20 /home/boinc/slots/1/PanDA_Pilot-6678071505/pilotlog.txt
[2025-06-03 15:56:51] [end log extracts]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,126 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,127 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 15:56:51] 2025-06-03 22:56:31,790 | INFO     | 
[2025-06-03 15:56:51] 2025-06-03 22:56:31,790 | INFO     | job summary report
[2025-06-03 15:56:51] 2025-06-03 22:56:31,790 | INFO     | --------------------------------------------------
[2025-06-03 15:56:51] 2025-06-03 22:56:31,790 | INFO     | PanDA job id: 6678071505
[2025-06-03 15:56:51] 2025-06-03 22:56:31,790 | INFO     | task id: 45006595
[2025-06-03 15:56:51] 2025-06-03 22:56:31,790 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 15:53:43,998 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | pilot state: failed 
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | transexitcode: 65
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | exeerrorcode: 65
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | exitcode: 65
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | cpuconsumptiontime: 34 s
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | nevents: 0
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | neventsw: 0
[2025-06-03 15:56:51] 2025-06-03 22:56:31,791 | INFO     | pid: 1612976
[2025-06-03 15:56:51] 2025-06-03 22:56:31,792 | INFO     | pgrp: 1612976
[2025-06-03 15:56:51] 2025-06-03 22:56:31,792 | INFO     | corecount: 12
[2025-06-03 15:56:51] 2025-06-03 22:56:31,792 | INFO     | event service: False
[2025-06-03 15:56:51] 2025-06-03 22:56:31,792 | INFO     | sizes: {0: 2405010, 1: 2405010, 2: 2405209, 3: 2405237, 14: 2405265, 25: 2405293, 27: 2405655, 36: 2405683, 119: 2428916, 120: 2428892, 122: 2433155, 125: 2433463,
[2025-06-03 15:56:51] 2025-06-03 22:56:31,792 | INFO     | --------------------------------------------------
[2025-06-03 15:56:51] 2025-06-03 22:56:31,792 | INFO     | 
[2025-06-03 15:56:51] 2025-06-03 22:56:31,792 | INFO     | executing command: ls -lF /home/boinc/slots/1
[2025-06-03 15:56:51] 2025-06-03 22:56:31,891 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,891 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,891 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,891 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,893 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,893 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:56:51] 2025-06-03 22:56:31,893 | INFO     | job 6678071505 has completed (purged errors)
[2025-06-03 15:56:51] 2025-06-03 22:56:31,893 | INFO     | overall cleanup function is called
[2025-06-03 15:56:51] 2025-06-03 22:56:32,905 | INFO     | --- collectZombieJob: --- 10, [1612976]
[2025-06-03 15:56:51] 2025-06-03 22:56:32,905 | INFO     | zombie collector waiting for pid 1612976
[2025-06-03 15:56:51] 2025-06-03 22:56:32,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:56:51] 2025-06-03 22:56:32,905 | INFO     | collected zombie processes
[2025-06-03 15:56:51] 2025-06-03 22:56:32,905 | INFO     | will attempt to kill all subprocesses of pid=1612976
[2025-06-03 15:56:51] 2025-06-03 22:56:35,222 | INFO     | process IDs to be killed: [1612976] (in reverse order)
[2025-06-03 15:56:51] 2025-06-03 22:56:35,667 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:56:51] 2025-06-03 22:56:35,668 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:56:51] 2025-06-03 22:56:35,803 | INFO     | did not find any defunct processes belonging to 1612976
[2025-06-03 15:56:51] 2025-06-03 22:56:35,877 | INFO     | did not find any defunct processes belonging to 1612976
[2025-06-03 15:56:51] 2025-06-03 22:56:35,877 | INFO     | ready for new job
[2025-06-03 15:56:51] 2025-06-03 22:56:35,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:56:51] 2025-06-03 22:56:35,880 | INFO     | **************************************
[2025-06-03 15:56:51] 2025-06-03 22:56:35,880 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:56:51] 2025-06-03 22:56:35,880 | INFO     | **************************************
[2025-06-03 15:56:51] 2025-06-03 22:56:35,880 | INFO     | 
[2025-06-03 15:56:51] 2025-06-03 22:56:35,887 | INFO     | architecture information:
[2025-06-03 15:56:51] 2025-06-03 22:56:35,888 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:56:51] 2025-06-03 22:56:35,953 | INFO     | cat /etc/os-release:
[2025-06-03 15:56:51] NAME="CentOS Linux"
[2025-06-03 15:56:51] VERSION="7 (Core)"
[2025-06-03 15:56:51] ID="centos"
[2025-06-03 15:56:51] ID_LIKE="rhel fedora"
[2025-06-03 15:56:51] VERSION_ID="7"
[2025-06-03 15:56:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:56:51] ANSI_COLOR="0;31"
[2025-06-03 15:56:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:56:51] HOME_URL="https://www.centos.org/"
[2025-06-03 15:56:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:56:51] 
[2025-06-03 15:56:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:56:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:56:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:56:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:56:51] 
[2025-06-03 15:56:51] 2025-06-03 22:56:35,953 | INFO     | **************************************
[2025-06-03 15:56:51] 2025-06-03 22:56:36,457 | INFO     | executing command: df -mP /home/boinc/slots/1
[2025-06-03 15:56:51] 2025-06-03 22:56:36,533 | INFO     | sufficient remaining disk space (1583838396416 B)
[2025-06-03 15:56:51] 2025-06-03 22:56:36,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:56:51] 2025-06-03 22:56:36,534 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:56:51] 2025-06-03 22:56:36,534 | INFO     | update_server=False
[2025-06-03 15:56:51] 2025-06-03 22:56:36,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:56:51] 2025-06-03 22:56:36,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:56:51] 2025-06-03 22:56:36,536 | INFO     | aborting loop
[2025-06-03 15:56:51] 2025-06-03 22:56:36,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:56:51] 2025-06-03 22:56:36,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:56:51] 2025-06-03 22:56:36,661 | INFO     | all job control threads have been joined
[2025-06-03 15:56:51] 2025-06-03 22:56:37,136 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:56:51] 2025-06-03 22:56:37,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:56:51] 2025-06-03 22:56:37,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:56:51] 2025-06-03 22:56:37,190 | INFO     | all payload control threads have been joined
[2025-06-03 15:56:51] 2025-06-03 22:56:37,515 | INFO     | all data control threads have been joined
[2025-06-03 15:56:51] 2025-06-03 22:56:37,541 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:37,542 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:37,557 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:37,619 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:37,666 | INFO     | [job] control thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:37,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:38,111 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:38,115 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:38,197 | INFO     | [payload] control thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:38,399 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:38,521 | INFO     | [data] control thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:38,543 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:38,580 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:38,929 | INFO     | [job] validate thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:38,957 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:40,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:56:51] 2025-06-03 22:56:44,012 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:56:51] 2025-06-03 22:56:44,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623227729728)>', '<ExcThread(monitor, started 140622816057088)>']
[2025-06-03 15:56:51] 2025-06-03 22:56:45,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:56:51] 2025-06-03 22:56:45,199 | INFO     | [monitor] control thread has ended
[2025-06-03 15:56:51] 2025-06-03 22:56:49,427 | INFO     | all workflow threads have been joined
[2025-06-03 15:56:51] 2025-06-03 22:56:49,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:56:51] 2025-06-03 22:56:49,427 | INFO     | traces error code: 0
[2025-06-03 15:56:51] 2025-06-03 22:56:49,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:56:51] 2025-06-03 22:56:50,249 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:56:51] 2025-06-03 22:56:50,268 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:56:51] 2025-06-03 22:56:50,299 [wrapper] pilotpid: 1579518
[2025-06-03 15:56:51] 2025-06-03 22:56:50,313 [wrapper] Pilot exit status: 0
[2025-06-03 15:56:51] 2025-06-03 22:56:50,438 [wrapper] pandaids: 6678071505
[2025-06-03 15:56:51] 2025-06-03 22:56:50,752 [wrapper] cleanup supervisor_pilot 1579558 1579522
[2025-06-03 15:56:51] 2025-06-03 22:56:50,764 [wrapper] Test setup, not cleaning
[2025-06-03 15:56:51] 2025-06-03 22:56:50,780 [wrapper] apfmon messages muted
[2025-06-03 15:56:51] 2025-06-03 22:56:50,792 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:56:51] 2025-06-03 22:56:50,816 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:56:51]  *** Error codes and diagnostics ***
[2025-06-03 15:56:51]     "exeErrorCode": 65,
[2025-06-03 15:56:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:56:51]     "pilotErrorCode": 1305,
[2025-06-03 15:56:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:56:51]  *** Listing of results directory ***
[2025-06-03 15:56:51] total 212992
[2025-06-03 15:56:51] -rwx------. 1 boinc boinc     37140 Jun  3 13:49 runpilot2-wrapper.sh
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:49 queuedata.json
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc    495897 Jun  3 13:49 pilot3.tar.gz
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:56:51] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:49 run_atlas
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:49 job.xml
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc      6597 Jun  3 15:49 init_data.xml
[2025-06-03 15:56:51] -rw-r--r--. 2 boinc boinc 214058091 Jun  3 15:49 EVNT.45006593._001816.pool.root.1
[2025-06-03 15:56:51] -rw-r--r--. 2 boinc boinc    508868 Jun  3 15:49 input.tar.gz
[2025-06-03 15:56:51] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:49 start_atlas.sh
[2025-06-03 15:56:51] drwxrwx--x. 2 boinc boinc      4096 Jun  3 15:49 shared
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:49 boinc_lockfile
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc      2525 Jun  3 15:49 pandaJob.out
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc    986861 Jun  3 15:50 agis_schedconf.cvmfs.json
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc   1603667 Jun  3 15:50 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:56:51] drwx------. 4 boinc boinc      4096 Jun  3 15:50 pilot3
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc       955 Jun  3 15:53 memory_monitor_summary.json
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc     21510 Jun  3 15:53 log.45006595._045274.job.log.tgz.1
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc        95 Jun  3 15:55 pilot_heartbeat.json
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc      8340 Jun  3 15:56 heartbeat.json
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc       524 Jun  3 15:56 boinc_task_state.xml
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc      4352 Jun  3 15:56 pilotlog.txt
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc        23 Jun  3 15:56 wrapper_checkpoint.txt
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc     83206 Jun  3 15:56 log.45006595._045274.job.log.1
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:56 boinc_mmap_file
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc       188 Jun  3 15:56 output.list
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:56 runtime_log
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc    122880 Jun  3 15:56 result.tar.gz
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc       645 Jun  3 15:56 TCLKDm2kng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGvZKDmwfsrBn.diag
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc      8484 Jun  3 15:56 runtime_log.err
[2025-06-03 15:56:51] -rw-r--r--. 1 boinc boinc     21693 Jun  3 15:56 stderr.txt
[2025-06-03 15:56:51] No HITS result produced
[2025-06-03 15:56:51]  *** Contents of shared directory: ***
[2025-06-03 15:56:51] total 209684
[2025-06-03 15:56:51] -rw-r--r--. 2 boinc boinc 214058091 Jun  3 15:49 ATLAS.root_0
[2025-06-03 15:56:51] -rw-r--r--. 2 boinc boinc    508868 Jun  3 15:49 input.tar.gz
[2025-06-03 15:56:51] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:49 start_atlas.sh
[2025-06-03 15:56:51] -rw-------. 1 boinc boinc    122880 Jun  3 15:56 result.tar.gz
15:56:52 (1565730): run_atlas exited; CPU time 60.978207
15:56:52 (1565730): called boinc_finish(0)

</stderr_txt>
]]>

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