Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 00:37:06 (3623970): Detected: vboxwrapper 26206
2025-06-04 00:37:06 (3623970): Detected: BOINC client v8.0.2
2025-06-04 00:37:06 (3623970): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-06-04 00:37:06 (3623970): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 00:37:06 (3623970): Create VM. (boinc_d32f49b8109de514, slot#9)
2025-06-04 00:37:06 (3623970): Setting Memory Size for VM. (4500MB)
2025-06-04 00:37:06 (3623970): Setting CPU Count for VM. (5)
2025-06-04 00:37:06 (3623970): Setting Chipset Options for VM.
2025-06-04 00:37:06 (3623970): Setting Graphics Controller Options for VM.
2025-06-04 00:37:07 (3623970): Setting Boot Options for VM.
2025-06-04 00:37:07 (3623970): Setting Network Configuration for NAT.
2025-06-04 00:37:07 (3623970): Enabling VM Network Access.
2025-06-04 00:37:07 (3623970): Disabling USB Support for VM.
2025-06-04 00:37:07 (3623970): Disabling COM Port Support for VM.
2025-06-04 00:37:07 (3623970): Disabling LPT Port Support for VM.
2025-06-04 00:37:07 (3623970): Disabling Audio Support for VM.
2025-06-04 00:37:07 (3623970): Disabling Clipboard Support for VM.
2025-06-04 00:37:07 (3623970): Disabling Drag and Drop Support for VM.
2025-06-04 00:37:07 (3623970): Adding storage controller(s) to VM.
2025-06-04 00:37:07 (3623970): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 00:37:09 (3623970): Adding VirtualBox Guest Additions to VM.
2025-06-04 00:37:09 (3623970): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 00:37:09 (3623970): forwarding host port 60177 to guest port 80
2025-06-04 00:37:09 (3623970): Enabling remote desktop for VM.
2025-06-04 00:37:09 (3623970): Required extension pack not installed, remote desktop not enabled.
2025-06-04 00:37:09 (3623970): Enabling shared directory for VM.
2025-06-04 00:37:09 (3623970): Starting VM using VBoxManage interface. (boinc_d32f49b8109de514, slot#9)
2025-06-04 00:37:11 (3623970): Successfully started VM. (PID = '3624551')
2025-06-04 00:37:11 (3623970): Reporting VM Process ID to BOINC.
2025-06-04 00:37:11 (3623970): Guest Log: BIOS: VirtualBox 7.0.20
2025-06-04 00:37:11 (3623970): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 00:37:11 (3623970): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 00:37:11 (3623970): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 00:37:11 (3623970): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 00:37:11 (3623970): Detected: Web Application Enabled (http://localhost:60177)
2025-06-04 00:37:11 (3623970): Preference change detected
2025-06-04 00:37:11 (3623970): Setting CPU throttle for VM. (100%)
2025-06-04 00:37:11 (3623970): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 00:37:13 (3623970): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 00:37:13 (3623970): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 00:37:16 (3623970): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 00:37:16 (3623970): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 00:37:16 (3623970): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 00:37:27 (3623970): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 00:37:27 (3623970): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 00:37:36 (3623970): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 00:37:36 (3623970): Guest Log: 00:00:00.000171 main     Log opened 2025-06-03T22:37:35.028435000Z
2025-06-04 00:37:36 (3623970): Guest Log: 00:00:00.000286 main     OS Product: Linux
2025-06-04 00:37:36 (3623970): Guest Log: 00:00:00.000313 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 00:37:36 (3623970): Guest Log: 00:00:00.000334 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 00:37:36 (3623970): Guest Log: 00:00:00.000365 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 00:37:36 (3623970): Guest Log: 00:00:00.000366 main     Process ID: 1321
2025-06-04 00:37:36 (3623970): Guest Log: 00:00:00.000367 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 00:37:36 (3623970): Guest Log: 00:00:00.001768 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 00:37:36 (3623970): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 00:37:36 (3623970): Guest Log: [INFO] Mounting shared directory
2025-06-04 00:37:36 (3623970): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 00:37:43 (3623970): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 00:37:43 (3623970): Guest Log: [INFO] Detected branch: prod
2025-06-04 00:37:44 (3623970): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 00:37:44 (3623970): Guest Log: Copying input files
2025-06-04 00:37:46 (3623970): Guest Log: Copied input files into RunAtlas.
2025-06-04 00:37:46 (3623970): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 00:37:46 (3623970): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 00:37:46 (3623970): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 00:37:46 (3623970): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 00:37:55 (3623970): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 00:37:56 (3623970): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 00:37:56 (3623970): Guest Log: 2.6.3.0 1596 0 32044 146760 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 00:37:57 (3623970): Guest Log: copied the webapp to /var/www
2025-06-04 00:37:57 (3623970): Guest Log: ATHENA_PROC_NUMBER=5
2025-06-04 00:37:57 (3623970): Guest Log: ATHENA_CORE_NUMBER=5
2025-06-04 00:37:58 (3623970): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 00:37:58 (3623970): Guest Log:  *** Starting ATLAS job. (PandaID=6677975724 taskID=45006595) ***
2025-06-04 02:16:11 (3623970): Status Report: Elapsed Time: '6000.000000'
2025-06-04 02:16:11 (3623970): Status Report: CPU Time: '27031.120000'
2025-06-04 02:28:32 (3623970): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 02:28:52 (3623970): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 02:36:14 (3623970): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 02:36:34 (3623970): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 02:58:50 (3623970): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 02:59:09 (3623970): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 03:03:22 (3623970): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 03:03:42 (3623970): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 03:28:28 (3623970): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 03:28:48 (3623970): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 03:31:43 (3623970): Guest Log:  *** Job finished ***
2025-06-04 03:31:43 (3623970): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:29:51,408 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:29:51,408 | INFO     | traces error code: 0
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:29:51,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,554 | INFO     | PID=5914 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,555 | INFO     | found 0 job(s) in 20 queues
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,556 | CRITICAL | thread 'MainThread' is not alive
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,556 | INFO     | [monitor] control thread has ended
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,655 [wrapper] ==== pilot stdout END ====
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,662 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,667 [wrapper] pilotpid: 5914
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,677 [wrapper] Pilot exit status: 0
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,761 [wrapper] pandaids: 6677975724
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,793 [wrapper] cleanup supervisor_pilot  8224 5915
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,804 [wrapper] Test setup, not cleaning
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,810 [wrapper] apfmon messages muted
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,816 [wrapper] ==== wrapper stdout END ====
2025-06-04 03:31:43 (3623970): Guest Log: 2025-06-04 01:30:02,821 [wrapper] ==== wrapper stderr END ====
2025-06-04 03:31:43 (3623970): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 03:31:43 (3623970): Guest Log:     "exeErrorCode": 0,
2025-06-04 03:31:43 (3623970): Guest Log:     "exeErrorDiag": "",
2025-06-04 03:31:43 (3623970): Guest Log:     "pilotErrorCode": 0,
2025-06-04 03:31:43 (3623970): Guest Log:     "pilotErrorDiag": "",
2025-06-04 03:31:43 (3623970): Guest Log:  *** Listing of results directory ***
2025-06-04 03:31:43 (3623970): Guest Log: total 177000
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 atlas atlas    549845 Jun  2 09:40 pilot3.tar.gz
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 18:58 queuedata.json
2025-06-04 03:31:43 (3623970): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 18:59 runpilot2-wrapper.sh
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 atlas atlas      9411 Jun  3 22:37 init_data.xml
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 atlas atlas     15093 Jun  3 22:37 start_atlas.sh
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 atlas atlas    564117 Jun  3 22:37 input.tar.gz
2025-06-04 03:31:43 (3623970): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 22:37 EVNT.45006593._001715.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  3 22:37 pandaJob.out
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas    986861 Jun  3 22:38 agis_schedconf.cvmfs.json
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 22:38 agis_ddmendpoints.agis.ALL.json
2025-06-04 03:31:43 (3623970): Guest Log: drwx------. 6 atlas atlas      4096 Jun  3 22:38 pilot3
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas 175020769 Jun  4 01:28 HITS.45006595._042816.pool.root.1
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas      1034 Jun  4 01:29 memory_monitor_summary.json
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas    312526 Jun  4 01:29 log.45006595._042816.job.log.tgz.1
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas      7758 Jun  4 01:29 heartbeat.json
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 01:30 pilot_heartbeat.json
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas       814 Jun  4 01:30 pilotlog.txt
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas    867128 Jun  4 01:30 log.45006595._042816.job.log.1
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 01:30 output.list
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 01:30 runtime_log
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas   1198080 Jun  4 01:30 result.tar.gz
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 atlas atlas      8602 Jun  4 01:30 runtime_log.err
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas       660 Jun  4 01:30 dE5LDmM2lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1mlKDms7wYWn.diag
2025-06-04 03:31:43 (3623970): Guest Log: Looking for outputfile HITS.45006595._042816.pool.root.1
2025-06-04 03:31:43 (3623970): Guest Log: HITS file was successfully produced
2025-06-04 03:31:43 (3623970): Guest Log: -rw-------. 1 atlas atlas 175020769 Jun  4 01:28 /home/atlas/RunAtlas/HITS.45006595._042816.pool.root.1
2025-06-04 03:31:43 (3623970): Guest Log: Successfully finished the ATLAS job!
2025-06-04 03:31:43 (3623970): Guest Log: Copying the results back to the shared directory!
2025-06-04 03:31:43 (3623970): Guest Log:  *** Contents of shared directory: ***
2025-06-04 03:31:43 (3623970): Guest Log: total 211656
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 root root 214939102 Jun  3 22:37 ATLAS.root_0
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 root root      9411 Jun  3 22:37 init_data.xml
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 root root    564117 Jun  3 22:37 input.tar.gz
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 root root   1198080 Jun  4  2025 result.tar.gz
2025-06-04 03:31:43 (3623970): Guest Log: -rw-r--r--. 1 root root     15093 Jun  3 22:37 start_atlas.sh
2025-06-04 03:31:43 (3623970): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 03:31:43 (3623970): VM Completion File Detected.
2025-06-04 03:31:43 (3623970): Powering off VM.
2025-06-04 03:31:44 (3623970): Successfully stopped VM.
2025-06-04 03:31:44 (3623970): Deregistering VM. (boinc_d32f49b8109de514, slot#9)
2025-06-04 03:31:44 (3623970): Removing network bandwidth throttle group from VM.
2025-06-04 03:31:44 (3623970): Removing VM from VirtualBox.
03:31:49 (3623970): called boinc_finish(0)

</stderr_txt>
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