Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:47:13 (6589): wrapper (7.7.26015): starting
10:47:13 (6589): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:47:13] Arguments: --nthreads 8
[2025-06-04 10:47:13] Threads: 8
[2025-06-04 10:47:13] Checking for CVMFS
[2025-06-04 10:47:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:47:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:47:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:47:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:47:16] 2.11.2.0 6477 33002 92816 146773 2 16 12614105 25165824 4293 130560 0 17037773 99.836 18664871 1896 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:47:16] CVMFS is ok
[2025-06-04 10:47:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:47:16] Checking for apptainer binary...
[2025-06-04 10:47:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:47:16] Running /usr/bin/apptainer --version
[2025-06-04 10:47:16] apptainer version 1.3.2-1.el7
[2025-06-04 10:47:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:52:50] cg-vwn261.simple-grid.lan
[2025-06-04 10:52:50] apptainer works
[2025-06-04 10:52:50] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:52:50] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:52:50] Starting ATLAS job with PandaID=6677976168
[2025-06-04 10:52:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:07:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:07:55] 2025-06-04 12:46:32,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:07:55] 2025-06-04 12:46:32,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:07:55] 2025-06-04 12:46:32,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:07:55] 2025-06-04 12:46:32,763 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:07:55] 2025-06-04 12:46:32,764 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,765 | INFO     | sum of deviations: 119479652325.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,766 | INFO     | mean x: 1749034482.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,766 | INFO     | mean y: 2383670.5668202764
[2025-06-04 16:07:55] 2025-06-04 12:46:32,766 | INFO     | -- intersect: -65952038409.4308
[2025-06-04 16:07:55] 2025-06-04 12:46:32,766 | INFO     | intersect: -65952038409.4308
[2025-06-04 16:07:55] 2025-06-04 12:46:32,774 | INFO     | chi2: 7.844817721342391
[2025-06-04 16:07:55] 2025-06-04 12:46:32,774 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,776 | INFO     | sum of deviations: 130583074143.50005
[2025-06-04 16:07:55] 2025-06-04 12:46:32,776 | INFO     | mean x: 1749034329.5
[2025-06-04 16:07:55] 2025-06-04 12:46:32,776 | INFO     | mean y: 2391392.3349056602
[2025-06-04 16:07:55] 2025-06-04 12:46:32,777 | INFO     | -- intersect: -77302838945.77605
[2025-06-04 16:07:55] 2025-06-04 12:46:32,777 | INFO     | intersect: -77302838945.77605
[2025-06-04 16:07:55] 2025-06-04 12:46:32,777 | INFO     | chi2: 7.14107034775214
[2025-06-04 16:07:55] 2025-06-04 12:46:32,777 | INFO     | current chi2=7.14107034775214 (change=8.970856922215741 %)
[2025-06-04 16:07:55] 2025-06-04 12:46:32,777 | INFO     | right removable region: 211
[2025-06-04 16:07:55] 2025-06-04 12:46:32,778 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,779 | INFO     | sum of deviations: 44052554311.5
[2025-06-04 16:07:55] 2025-06-04 12:46:32,780 | INFO     | mean x: 1749034634.5
[2025-06-04 16:07:55] 2025-06-04 12:46:32,780 | INFO     | mean y: 2437390.533018868
[2025-06-04 16:07:55] 2025-06-04 12:46:32,780 | INFO     | -- intersect: -26076696327.415337
[2025-06-04 16:07:55] 2025-06-04 12:46:32,780 | INFO     | intersect: -26076696327.415337
[2025-06-04 16:07:55] 2025-06-04 12:46:32,780 | INFO     | chi2: 2.695250131843803
[2025-06-04 16:07:55] 2025-06-04 12:46:32,780 | INFO     | current chi2=2.695250131843803 (change=65.64292214832244 %)
[2025-06-04 16:07:55] 2025-06-04 12:46:32,781 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,782 | INFO     | sum of deviations: -918553067.0000019
[2025-06-04 16:07:55] 2025-06-04 12:46:32,783 | INFO     | mean x: 1749034787.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,783 | INFO     | mean y: 2470822.193236715
[2025-06-04 16:07:55] 2025-06-04 12:46:32,783 | INFO     | -- intersect: 586619467.9398694
[2025-06-04 16:07:55] 2025-06-04 12:46:32,783 | INFO     | intersect: 586619467.9398694
[2025-06-04 16:07:55] 2025-06-04 12:46:32,783 | INFO     | chi2: 0.8109141900975464
[2025-06-04 16:07:55] 2025-06-04 12:46:32,783 | INFO     | current chi2=0.8109141900975464 (change=69.91321211650195 %)
[2025-06-04 16:07:55] 2025-06-04 12:46:32,784 | INFO     | sum of square deviations: 2555770710.5
[2025-06-04 16:07:55] 2025-06-04 12:46:32,799 | INFO     | sum of deviations: -4921126291.499998
[2025-06-04 16:07:55] 2025-06-04 12:46:32,799 | INFO     | mean x: 1749034939.5
[2025-06-04 16:07:55] 2025-06-04 12:46:32,799 | INFO     | mean y: 2473938.371287129
[2025-06-04 16:07:55] 2025-06-04 12:46:32,799 | INFO     | -- intersect: 3370233726.119101
[2025-06-04 16:07:55] 2025-06-04 12:46:32,799 | INFO     | intersect: 3370233726.119101
[2025-06-04 16:07:55] 2025-06-04 12:46:32,800 | INFO     | chi2: 0.7933660639995307
[2025-06-04 16:07:55] 2025-06-04 12:46:32,800 | INFO     | current chi2=0.7933660639995307 (change=2.1639929738934285 %)
[2025-06-04 16:07:55] 2025-06-04 12:46:32,800 | INFO     | left removable region: 30
[2025-06-04 16:07:55] 2025-06-04 12:46:32,800 | INFO     | sum of square deviations: 1838657730.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,802 | INFO     | sum of deviations: 4774746391.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,802 | INFO     | mean x: 1749035214.0
[2025-06-04 16:07:55] 2025-06-04 12:46:32,802 | INFO     | mean y: 2487526.773480663
[2025-06-04 16:07:55] 2025-06-04 12:46:32,802 | INFO     | -- intersect: -4539521265.5744095
[2025-06-04 16:07:55] 2025-06-04 12:46:32,802 | INFO     | intersect: -4539521265.5744095
[2025-06-04 16:07:55] 2025-06-04 12:46:32,802 | INFO     | chi2: 0.0002716775457385402
[2025-06-04 16:07:55] 2025-06-04 12:46:32,803 | INFO     | -- intersect: -4539521265.5744095
[2025-06-04 16:07:55] 2025-06-04 12:46:32,803 | INFO     | current memory leak: 2.60 B/s (using 181 data points, chi2=0.00)
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | ..............................
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | . Timing measurements:
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | . get job = 0 s
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | . initial setup = 8 s
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | . payload setup = 167 s
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | . stage-in = 0 s
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | . payload execution = 13349 s
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | . stage-out = 3 s
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | . log creation = 1 s
[2025-06-04 16:07:55] 2025-06-04 12:46:32,804 | INFO     | ..............................
[2025-06-04 16:07:55] 2025-06-04 12:46:33,029 | INFO     | 
[2025-06-04 16:07:55] 2025-06-04 12:46:33,030 | INFO     | job summary report
[2025-06-04 16:07:55] 2025-06-04 12:46:33,030 | INFO     | --------------------------------------------------
[2025-06-04 16:07:55] 2025-06-04 12:46:33,030 | INFO     | PanDA job id: 6677976168
[2025-06-04 16:07:55] 2025-06-04 12:46:33,030 | INFO     | task id: 45006595
[2025-06-04 16:07:55] 2025-06-04 12:46:33,030 | INFO     | errors: (none)
[2025-06-04 16:07:55] 2025-06-04 12:46:33,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:07:55] 2025-06-04 12:46:33,030 | INFO     | pilot state: finished 
[2025-06-04 16:07:55] 2025-06-04 12:46:33,030 | INFO     | transexitcode: 0
[2025-06-04 16:07:55] 2025-06-04 12:46:33,031 | INFO     | exeerrorcode: 0
[2025-06-04 16:07:55] 2025-06-04 12:46:33,031 | INFO     | exeerrordiag: 
[2025-06-04 16:07:55] 2025-06-04 12:46:33,031 | INFO     | exitcode: 0
[2025-06-04 16:07:55] 2025-06-04 12:46:33,031 | INFO     | exitmsg: OK
[2025-06-04 16:07:55] 2025-06-04 12:46:33,031 | INFO     | cpuconsumptiontime: 49204 s
[2025-06-04 16:07:55] 2025-06-04 12:46:33,031 | INFO     | nevents: 400
[2025-06-04 16:07:55] 2025-06-04 12:46:33,031 | INFO     | neventsw: 0
[2025-06-04 16:07:55] 2025-06-04 12:46:33,031 | INFO     | pid: 23664
[2025-06-04 16:07:55] 2025-06-04 12:46:33,031 | INFO     | pgrp: 23664
[2025-06-04 16:07:55] 2025-06-04 12:46:33,032 | INFO     | corecount: 8
[2025-06-04 16:07:55] 2025-06-04 12:46:33,032 | INFO     | event service: False
[2025-06-04 16:07:55] 2025-06-04 12:46:33,032 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 76: 2405508, 87: 2405710, 88: 2405798, 98: 2406106, 1
[2025-06-04 16:07:55] 2025-06-04 12:46:33,032 | INFO     | --------------------------------------------------
[2025-06-04 16:07:55] 2025-06-04 12:46:33,032 | INFO     | 
[2025-06-04 16:07:55] 2025-06-04 12:46:33,032 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 16:07:55] 2025-06-04 12:46:33,471 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,471 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,471 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,471 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:07:55] 2025-06-04 12:46:33,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:07:55] 2025-06-04 12:46:33,473 | INFO     | job 6677976168 has completed (purged errors)
[2025-06-04 16:07:55] 2025-06-04 12:46:33,473 | INFO     | overall cleanup function is called
[2025-06-04 16:07:55] 2025-06-04 12:46:34,482 | INFO     | --- collectZombieJob: --- 10, [23664]
[2025-06-04 16:07:55] 2025-06-04 12:46:34,483 | INFO     | zombie collector waiting for pid 23664
[2025-06-04 16:07:55] 2025-06-04 12:46:34,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:07:55] 2025-06-04 12:46:34,483 | INFO     | collected zombie processes
[2025-06-04 16:07:55] 2025-06-04 12:46:34,483 | INFO     | will attempt to kill all subprocesses of pid=23664
[2025-06-04 16:07:55] 2025-06-04 12:46:34,607 | INFO     | process IDs to be killed: [23664] (in reverse order)
[2025-06-04 16:07:55] 2025-06-04 12:46:34,896 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:07:55] 2025-06-04 12:46:34,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:07:55] 2025-06-04 12:46:34,900 | INFO     | did not find any defunct processes belonging to 23664
[2025-06-04 16:07:55] 2025-06-04 12:46:34,905 | INFO     | did not find any defunct processes belonging to 23664
[2025-06-04 16:07:55] 2025-06-04 12:46:34,905 | INFO     | ready for new job
[2025-06-04 16:07:55] 2025-06-04 12:46:34,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:07:55] 2025-06-04 12:46:34,908 | INFO     | **************************************
[2025-06-04 16:07:55] 2025-06-04 12:46:34,908 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:07:55] 2025-06-04 12:46:34,908 | INFO     | **************************************
[2025-06-04 16:07:55] 2025-06-04 12:46:34,908 | INFO     | 
[2025-06-04 16:07:55] 2025-06-04 12:46:34,909 | INFO     | pilot is running in a VM
[2025-06-04 16:07:55] 2025-06-04 12:46:34,909 | INFO     | architecture information:
[2025-06-04 16:07:55] 2025-06-04 12:46:34,918 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:07:55] 2025-06-04 12:46:35,179 | INFO     | cat /etc/os-release:
[2025-06-04 16:07:55] NAME="CentOS Linux"
[2025-06-04 16:07:55] VERSION="7 (Core)"
[2025-06-04 16:07:55] ID="centos"
[2025-06-04 16:07:55] ID_LIKE="rhel fedora"
[2025-06-04 16:07:55] VERSION_ID="7"
[2025-06-04 16:07:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:07:55] ANSI_COLOR="0;31"
[2025-06-04 16:07:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:07:55] HOME_URL="https://www.centos.org/"
[2025-06-04 16:07:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:07:55] 
[2025-06-04 16:07:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:07:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:07:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:07:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:07:55] 
[2025-06-04 16:07:55] 2025-06-04 12:46:35,179 | INFO     | **************************************
[2025-06-04 16:07:55] 2025-06-04 12:46:35,682 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 16:07:55] 2025-06-04 12:46:36,055 | INFO     | sufficient remaining disk space (496503881728 B)
[2025-06-04 16:07:55] 2025-06-04 12:46:36,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:07:55] 2025-06-04 12:46:36,056 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:07:55] 2025-06-04 12:46:36,056 | INFO     | update_server=False
[2025-06-04 16:07:55] 2025-06-04 12:46:36,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:07:55] 2025-06-04 12:46:36,056 | INFO     | all payload control threads have been joined
[2025-06-04 16:07:55] 2025-06-04 12:46:36,062 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:07:55] 2025-06-04 12:46:36,063 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:07:55] 2025-06-04 12:46:36,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:07:55] 2025-06-04 12:46:36,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:07:55] 2025-06-04 12:46:36,111 | INFO     | all data control threads have been joined
[2025-06-04 16:07:55] 2025-06-04 12:46:36,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:07:55] 2025-06-04 12:46:36,474 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 16:07:55] 2025-06-04 12:46:36,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 16:07:55] 2025-06-04 12:46:36,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:07:55] 2025-06-04 12:46:36,475 | INFO     | will abort loop
[2025-06-04 16:07:55] 2025-06-04 12:46:36,542 | INFO     | all job control threads have been joined
[2025-06-04 16:07:55] 2025-06-04 12:46:37,062 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:37,065 | INFO     | [payload] control thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:37,098 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:37,117 | INFO     | [data] control thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:37,480 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:37,548 | INFO     | [job] control thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:37,948 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:37,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:07:55] 2025-06-04 12:46:38,043 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:38,162 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:38,257 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:38,310 | INFO     | [job] validate thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:38,390 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:38,445 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:38,473 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:38,978 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:39,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:07:55] 2025-06-04 12:46:43,451 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:07:55] 2025-06-04 12:46:43,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120862963520)>', '<ExcThread(monitor, started 140120128734976)>']
[2025-06-04 16:07:55] 2025-06-04 12:46:44,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:07:55] 2025-06-04 12:46:44,110 | INFO     | [monitor] control thread has ended
[2025-06-04 16:07:55] 2025-06-04 12:46:48,519 | INFO     | all workflow threads have been joined
[2025-06-04 16:07:55] 2025-06-04 12:46:48,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:07:55] 2025-06-04 12:46:48,520 | INFO     | traces error code: 0
[2025-06-04 16:07:55] 2025-06-04 12:46:48,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:07:55] 2025-06-04 12:46:48,875 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:07:55] 2025-06-04 12:46:48,929 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:07:55] 2025-06-04 12:46:49,024 [wrapper] pilotpid: 14362
[2025-06-04 16:07:55] 2025-06-04 12:46:49,121 [wrapper] Pilot exit status: 0
[2025-06-04 16:07:55] 2025-06-04 12:46:49,498 [wrapper] pandaids: 6677976168
[2025-06-04 16:07:55] 2025-06-04 12:46:50,286 [wrapper] cleanup supervisor_pilot 31108 14363
[2025-06-04 16:07:55] 2025-06-04 12:46:50,325 [wrapper] Test setup, not cleaning
[2025-06-04 16:07:55] 2025-06-04 12:46:50,417 [wrapper] apfmon messages muted
[2025-06-04 16:07:55] 2025-06-04 12:46:50,510 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:07:55] 2025-06-04 12:46:50,586 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:07:55]  *** Error codes and diagnostics ***
[2025-06-04 16:07:55]     "exeErrorCode": 0,
[2025-06-04 16:07:55]     "exeErrorDiag": "",
[2025-06-04 16:07:55]     "pilotErrorCode": 0,
[2025-06-04 16:07:55]     "pilotErrorDiag": "",
[2025-06-04 16:07:55]  *** Listing of results directory ***
[2025-06-04 16:07:55] total 381692
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 16:07:55] -rwx------. 1 boinc boinc     37140 Jun  3 21:02 runpilot2-wrapper.sh
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:02 queuedata.json
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:07:55] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:47 run_atlas
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:47 job.xml
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc      6391 Jun  4 10:47 init_data.xml
[2025-06-04 16:07:55] -rw-r--r--. 2 boinc boinc 213002525 Jun  4 10:47 EVNT.45006593._001729.pool.root.1
[2025-06-04 16:07:55] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:47 start_atlas.sh
[2025-06-04 16:07:55] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:47 shared
[2025-06-04 16:07:55] -rw-r--r--. 2 boinc boinc    508881 Jun  4 10:47 input.tar.gz
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:47 boinc_lockfile
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:52 pandaJob.out
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc    986774 Jun  4 10:56 agis_schedconf.cvmfs.json
[2025-06-04 16:07:55] drwx------. 4 boinc boinc      4096 Jun  4 10:56 pilot3
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc 170877827 Jun  4 14:43 HITS.45006595._043143.pool.root.1
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:44 boinc_task_state.xml
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc      1028 Jun  4 14:44 memory_monitor_summary.json
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc   1598969 Jun  4 14:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc    394415 Jun  4 14:44 log.45006595._043143.job.log.tgz.1
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc        95 Jun  4 14:45 pilot_heartbeat.json
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc      7704 Jun  4 14:46 heartbeat.json
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc      4725 Jun  4 14:46 pilotlog.txt
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc   1181126 Jun  4 14:46 log.45006595._043143.job.log.1
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc       357 Jun  4 14:46 output.list
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:46 runtime_log
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc   1597440 Jun  4 14:46 result.tar.gz
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc      8659 Jun  4 14:46 runtime_log.err
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc       657 Jun  4 14:46 ezzMDmS5lg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhdZKDm5yF0Lo.diag
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc      8192 Jun  4 16:07 boinc_mmap_file
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc        28 Jun  4 16:07 wrapper_checkpoint.txt
[2025-06-04 16:07:55] -rw-r--r--. 1 boinc boinc     20524 Jun  4 16:07 stderr.txt
[2025-06-04 16:07:55] HITS file was successfully produced:
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc 170877827 Jun  4 14:43 shared/HITS.pool.root.1
[2025-06-04 16:07:55]  *** Contents of shared directory: ***
[2025-06-04 16:07:55] total 376964
[2025-06-04 16:07:55] -rw-r--r--. 2 boinc boinc 213002525 Jun  4 10:47 ATLAS.root_0
[2025-06-04 16:07:55] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:47 start_atlas.sh
[2025-06-04 16:07:55] -rw-r--r--. 2 boinc boinc    508881 Jun  4 10:47 input.tar.gz
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc 170877827 Jun  4 14:43 HITS.pool.root.1
[2025-06-04 16:07:55] -rw-------. 1 boinc boinc   1597440 Jun  4 14:46 result.tar.gz
16:07:57 (6589): run_atlas exited; CPU time 49392.364697
16:07:57 (6589): called boinc_finish(0)

</stderr_txt>
]]>

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