Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:32:13 (1145956): wrapper (7.7.26015): starting
18:32:13 (1145956): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:32:13] Arguments: --nthreads 8
[2025-06-03 18:32:13] Threads: 8
[2025-06-03 18:32:13] Checking for CVMFS
[2025-06-03 18:32:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:32:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:32:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:32:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:32:13] 2.12.6.0 3074763 22696 305308 146760 1 421 27702388 32935937 11530 16776704 0 51839935 99.574 62079015 10390 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 18:32:13] CVMFS is ok
[2025-06-03 18:32:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:32:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:32:13] Further information can be found at the LHC@home message board.
[2025-06-03 18:32:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:32:13] Checking for apptainer binary...
[2025-06-03 18:32:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:32:13] Running /usr/bin/apptainer --version
[2025-06-03 18:32:13] apptainer version 1.4.1-1.el9
[2025-06-03 18:32:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:32:14] c6-12-25-1.aglt2.org
[2025-06-03 18:32:14] apptainer works
[2025-06-03 18:32:14] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:32:14] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:32:14] Starting ATLAS job with PandaID=6677976122
[2025-06-03 18:32:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:35:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:35:07] 2025-06-04 01:34:52,040 | INFO     | sum of square deviations: 1778377530.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,043 | INFO     | sum of deviations: 54122493267.999985
[2025-06-03 21:35:07] 2025-06-04 01:34:52,043 | INFO     | mean x: 1748995421.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,044 | INFO     | mean y: 2114095.5418994413
[2025-06-03 21:35:07] 2025-06-04 01:34:52,044 | INFO     | -- intersect: -53226174781.2498
[2025-06-03 21:35:07] 2025-06-04 01:34:52,044 | INFO     | intersect: -53226174781.2498
[2025-06-03 21:35:07] 2025-06-04 01:34:52,045 | INFO     | chi2: 5.191689227550676
[2025-06-03 21:35:07] 2025-06-04 01:34:52,046 | INFO     | sum of square deviations: 1633472487.5
[2025-06-03 21:35:07] 2025-06-04 01:34:52,048 | INFO     | sum of deviations: 62608287265.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,048 | INFO     | mean x: 1748995268.5
[2025-06-03 21:35:07] 2025-06-04 01:34:52,048 | INFO     | mean y: 2122796.4942528736
[2025-06-03 21:35:07] 2025-06-04 01:34:52,049 | INFO     | -- intersect: -67033960782.093605
[2025-06-03 21:35:07] 2025-06-04 01:34:52,049 | INFO     | intersect: -67033960782.093605
[2025-06-03 21:35:07] 2025-06-04 01:34:52,050 | INFO     | chi2: 4.54623991325948
[2025-06-03 21:35:07] 2025-06-04 01:34:52,050 | INFO     | current chi2=4.54623991325948 (change=12.43235652215078 %)
[2025-06-03 21:35:07] 2025-06-04 01:34:52,050 | INFO     | right removable region: 173
[2025-06-03 21:35:07] 2025-06-04 01:34:52,051 | INFO     | sum of square deviations: 1633472487.5
[2025-06-03 21:35:07] 2025-06-04 01:34:52,053 | INFO     | sum of deviations: 14750267473.499989
[2025-06-03 21:35:07] 2025-06-04 01:34:52,053 | INFO     | mean x: 1748995573.5
[2025-06-03 21:35:07] 2025-06-04 01:34:52,054 | INFO     | mean y: 2155393.7413793104
[2025-06-03 21:35:07] 2025-06-04 01:34:52,054 | INFO     | -- intersect: -15791286318.01718
[2025-06-03 21:35:07] 2025-06-04 01:34:52,054 | INFO     | intersect: -15791286318.01718
[2025-06-03 21:35:07] 2025-06-04 01:34:52,055 | INFO     | chi2: 2.473776250255616
[2025-06-03 21:35:07] 2025-06-04 01:34:52,055 | INFO     | current chi2=2.473776250255616 (change=52.35122631901662 %)
[2025-06-03 21:35:07] 2025-06-04 01:34:52,056 | INFO     | sum of square deviations: 1496660620.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,058 | INFO     | sum of deviations: -11200688728.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,058 | INFO     | mean x: 1748995726.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,059 | INFO     | mean y: 2184284.6153846155
[2025-06-03 21:35:07] 2025-06-04 01:34:52,059 | INFO     | -- intersect: 13091295103.558678
[2025-06-03 21:35:07] 2025-06-04 01:34:52,059 | INFO     | intersect: 13091295103.558678
[2025-06-03 21:35:07] 2025-06-04 01:34:52,060 | INFO     | chi2: 1.3298835253851835
[2025-06-03 21:35:07] 2025-06-04 01:34:52,060 | INFO     | current chi2=1.3298835253851835 (change=46.24075135138976 %)
[2025-06-03 21:35:07] 2025-06-04 01:34:52,061 | INFO     | sum of square deviations: 1367709365.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,063 | INFO     | sum of deviations: -26555774404.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,063 | INFO     | mean x: 1748995878.5
[2025-06-03 21:35:07] 2025-06-04 01:34:52,063 | INFO     | mean y: 2202340.2317073173
[2025-06-03 21:35:07] 2025-06-04 01:34:52,064 | INFO     | -- intersect: 33961127512.15359
[2025-06-03 21:35:07] 2025-06-04 01:34:52,064 | INFO     | intersect: 33961127512.15359
[2025-06-03 21:35:07] 2025-06-04 01:34:52,064 | INFO     | chi2: 0.8407169675380743
[2025-06-03 21:35:07] 2025-06-04 01:34:52,065 | INFO     | current chi2=0.8407169675380743 (change=36.78266167749002 %)
[2025-06-03 21:35:07] 2025-06-04 01:34:52,065 | INFO     | sum of square deviations: 1246386160.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,067 | INFO     | sum of deviations: -27636843914.999992
[2025-06-03 21:35:07] 2025-06-04 01:34:52,068 | INFO     | mean x: 1748996031.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,068 | INFO     | mean y: 2203608.5911949687
[2025-06-03 21:35:07] 2025-06-04 01:34:52,068 | INFO     | -- intersect: 38783707983.36818
[2025-06-03 21:35:07] 2025-06-04 01:34:52,068 | INFO     | intersect: 38783707983.36818
[2025-06-03 21:35:07] 2025-06-04 01:34:52,069 | INFO     | chi2: 0.7935264822229766
[2025-06-03 21:35:07] 2025-06-04 01:34:52,069 | INFO     | current chi2=0.7935264822229766 (change=5.613123933169645 %)
[2025-06-03 21:35:07] 2025-06-04 01:34:52,069 | INFO     | left removable region: 40
[2025-06-03 21:35:07] 2025-06-04 01:34:52,070 | INFO     | sum of square deviations: 729472282.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,072 | INFO     | sum of deviations: -3979637559.9999995
[2025-06-03 21:35:07] 2025-06-04 01:34:52,072 | INFO     | mean x: 1748996458.0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,072 | INFO     | mean y: 2194062.6165413535
[2025-06-03 21:35:07] 2025-06-04 01:34:52,072 | INFO     | -- intersect: 9543847896.920504
[2025-06-03 21:35:07] 2025-06-04 01:34:52,073 | INFO     | intersect: 9543847896.920504
[2025-06-03 21:35:07] 2025-06-04 01:34:52,073 | INFO     | chi2: 0.06301784183281194
[2025-06-03 21:35:07] 2025-06-04 01:34:52,073 | INFO     | -- intersect: 9543847896.920504
[2025-06-03 21:35:07] 2025-06-04 01:34:52,074 | INFO     | current memory leak: -5.46 B/s (using 133 data points, chi2=0.06)
[2025-06-03 21:35:07] 2025-06-04 01:34:52,075 | INFO     | ..............................
[2025-06-03 21:35:07] 2025-06-04 01:34:52,075 | INFO     | . Timing measurements:
[2025-06-03 21:35:07] 2025-06-04 01:34:52,075 | INFO     | . get job = 0 s
[2025-06-03 21:35:07] 2025-06-04 01:34:52,075 | INFO     | . initial setup = 4 s
[2025-06-03 21:35:07] 2025-06-04 01:34:52,076 | INFO     | . payload setup = 12 s
[2025-06-03 21:35:07] 2025-06-04 01:34:52,076 | INFO     | . stage-in = 0 s
[2025-06-03 21:35:07] 2025-06-04 01:34:52,076 | INFO     | . payload execution = 10888 s
[2025-06-03 21:35:07] 2025-06-04 01:34:52,076 | INFO     | . stage-out = 3 s
[2025-06-03 21:35:07] 2025-06-04 01:34:52,076 | INFO     | . log creation = 0 s
[2025-06-03 21:35:07] 2025-06-04 01:34:52,076 | INFO     | ..............................
[2025-06-03 21:35:07] 2025-06-04 01:34:52,311 | INFO     | 
[2025-06-03 21:35:07] 2025-06-04 01:34:52,311 | INFO     | job summary report
[2025-06-03 21:35:07] 2025-06-04 01:34:52,312 | INFO     | --------------------------------------------------
[2025-06-03 21:35:07] 2025-06-04 01:34:52,312 | INFO     | PanDA job id: 6677976122
[2025-06-03 21:35:07] 2025-06-04 01:34:52,312 | INFO     | task id: 45006595
[2025-06-03 21:35:07] 2025-06-04 01:34:52,312 | INFO     | errors: (none)
[2025-06-03 21:35:07] 2025-06-04 01:34:52,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:35:07] 2025-06-04 01:34:52,313 | INFO     | pilot state: finished 
[2025-06-03 21:35:07] 2025-06-04 01:34:52,313 | INFO     | transexitcode: 0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,313 | INFO     | exeerrorcode: 0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,313 | INFO     | exeerrordiag: 
[2025-06-03 21:35:07] 2025-06-04 01:34:52,313 | INFO     | exitcode: 0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,314 | INFO     | exitmsg: OK
[2025-06-03 21:35:07] 2025-06-04 01:34:52,314 | INFO     | cpuconsumptiontime: 77777 s
[2025-06-03 21:35:07] 2025-06-04 01:34:52,314 | INFO     | nevents: 400
[2025-06-03 21:35:07] 2025-06-04 01:34:52,314 | INFO     | neventsw: 0
[2025-06-03 21:35:07] 2025-06-04 01:34:52,314 | INFO     | pid: 1158286
[2025-06-03 21:35:07] 2025-06-04 01:34:52,314 | INFO     | pgrp: 1158286
[2025-06-03 21:35:07] 2025-06-04 01:34:52,315 | INFO     | corecount: 8
[2025-06-03 21:35:07] 2025-06-04 01:34:52,315 | INFO     | event service: False
[2025-06-03 21:35:07] 2025-06-04 01:34:52,315 | INFO     | sizes: {0: 2404350, 1: 2405035, 2: 2405234, 9: 2405440, 13: 2405468, 10904: 2434631, 10905: 2434758, 10909: 2443811, 10920: 2443925}
[2025-06-03 21:35:07] 2025-06-04 01:34:52,315 | INFO     | --------------------------------------------------
[2025-06-03 21:35:07] 2025-06-04 01:34:52,315 | INFO     | 
[2025-06-03 21:35:07] 2025-06-04 01:34:52,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 21:35:07] 2025-06-04 01:34:52,351 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,352 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,352 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,352 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,352 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,355 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:35:07] 2025-06-04 01:34:52,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:35:07] 2025-06-04 01:34:52,355 | INFO     | job 6677976122 has completed (purged errors)
[2025-06-03 21:35:07] 2025-06-04 01:34:52,356 | INFO     | overall cleanup function is called
[2025-06-03 21:35:07] 2025-06-04 01:34:53,366 | INFO     | --- collectZombieJob: --- 10, [1158286]
[2025-06-03 21:35:07] 2025-06-04 01:34:53,367 | INFO     | zombie collector waiting for pid 1158286
[2025-06-03 21:35:07] 2025-06-04 01:34:53,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:35:07] 2025-06-04 01:34:53,367 | INFO     | collected zombie processes
[2025-06-03 21:35:07] 2025-06-04 01:34:53,367 | INFO     | will attempt to kill all subprocesses of pid=1158286
[2025-06-03 21:35:07] 2025-06-04 01:34:54,176 | INFO     | process IDs to be killed: [1158286] (in reverse order)
[2025-06-03 21:35:07] 2025-06-04 01:34:54,428 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:35:07] 2025-06-04 01:34:54,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:35:07] 2025-06-04 01:34:54,461 | INFO     | did not find any defunct processes belonging to 1158286
[2025-06-03 21:35:07] 2025-06-04 01:34:54,493 | INFO     | did not find any defunct processes belonging to 1158286
[2025-06-03 21:35:07] 2025-06-04 01:34:54,493 | INFO     | ready for new job
[2025-06-03 21:35:07] 2025-06-04 01:34:54,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:35:07] 2025-06-04 01:34:54,497 | INFO     | **************************************
[2025-06-03 21:35:07] 2025-06-04 01:34:54,497 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:35:07] 2025-06-04 01:34:54,498 | INFO     | **************************************
[2025-06-03 21:35:07] 2025-06-04 01:34:54,498 | INFO     | 
[2025-06-03 21:35:07] 2025-06-04 01:34:54,524 | INFO     | architecture information:
[2025-06-03 21:35:07] 2025-06-04 01:34:54,525 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:35:07] 2025-06-04 01:34:54,554 | INFO     | cat /etc/os-release:
[2025-06-03 21:35:07] NAME="CentOS Linux"
[2025-06-03 21:35:07] VERSION="7 (Core)"
[2025-06-03 21:35:07] ID="centos"
[2025-06-03 21:35:07] ID_LIKE="rhel fedora"
[2025-06-03 21:35:07] VERSION_ID="7"
[2025-06-03 21:35:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:35:07] ANSI_COLOR="0;31"
[2025-06-03 21:35:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:35:07] HOME_URL="https://www.centos.org/"
[2025-06-03 21:35:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:35:07] 
[2025-06-03 21:35:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:35:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:35:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:35:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:35:07] 
[2025-06-03 21:35:07] 2025-06-04 01:34:54,554 | INFO     | **************************************
[2025-06-03 21:35:07] 2025-06-04 01:34:55,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 21:35:07] 2025-06-04 01:34:55,089 | INFO     | sufficient remaining disk space (75208065024 B)
[2025-06-03 21:35:07] 2025-06-04 01:34:55,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:35:07] 2025-06-04 01:34:55,091 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:35:07] 2025-06-04 01:34:55,091 | INFO     | update_server=False
[2025-06-03 21:35:07] 2025-06-04 01:34:55,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:35:07] 2025-06-04 01:34:55,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:35:07] 2025-06-04 01:34:55,138 | INFO     | all job control threads have been joined
[2025-06-03 21:35:07] 2025-06-04 01:34:55,254 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:35:07] 2025-06-04 01:34:55,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:35:07] 2025-06-04 01:34:55,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:35:07] 2025-06-04 01:34:55,338 | INFO     | all data control threads have been joined
[2025-06-03 21:35:07] 2025-06-04 01:34:55,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:35:07] 2025-06-04 01:34:55,939 | INFO     | aborting loop
[2025-06-03 21:35:07] 2025-06-04 01:34:56,097 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:56,145 | INFO     | [job] control thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:56,344 | INFO     | [data] control thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:56,391 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:56,407 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:56,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:35:07] 2025-06-04 01:34:56,482 | INFO     | [job] validate thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:56,487 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:56,542 | INFO     | all payload control threads have been joined
[2025-06-03 21:35:07] 2025-06-04 01:34:56,896 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:56,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:56,945 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:57,098 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:57,247 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:57,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:35:07] 2025-06-04 01:34:57,548 | INFO     | [payload] control thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:57,553 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:34:58,327 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:35:00,474 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:35:07] 2025-06-04 01:35:01,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140563063953216)>', '<ExcThread(monitor, started 140562560689920)>']
[2025-06-03 21:35:07] 2025-06-04 01:35:02,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:35:07] 2025-06-04 01:35:02,290 | INFO     | [monitor] control thread has ended
[2025-06-03 21:35:07] 2025-06-04 01:35:07,015 | INFO     | all workflow threads have been joined
[2025-06-03 21:35:07] 2025-06-04 01:35:07,016 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:35:07] 2025-06-04 01:35:07,016 | INFO     | traces error code: 0
[2025-06-03 21:35:07] 2025-06-04 01:35:07,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:35:07] 2025-06-04 01:35:07,265 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:35:07] 2025-06-04 01:35:07,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:35:07] 2025-06-04 01:35:07,275 [wrapper] pilotpid: 1150012
[2025-06-03 21:35:07] 2025-06-04 01:35:07,281 [wrapper] Pilot exit status: 0
[2025-06-03 21:35:07] 2025-06-04 01:35:07,302 [wrapper] pandaids: 6677976122
[2025-06-03 21:35:07] 2025-06-04 01:35:07,474 [wrapper] cleanup supervisor_pilot 1764772 1150013
[2025-06-03 21:35:07] 2025-06-04 01:35:07,480 [wrapper] Test setup, not cleaning
[2025-06-03 21:35:07] 2025-06-04 01:35:07,485 [wrapper] apfmon messages muted
[2025-06-03 21:35:07] 2025-06-04 01:35:07,491 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:35:07] 2025-06-04 01:35:07,497 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:35:07]  *** Error codes and diagnostics ***
[2025-06-03 21:35:07]     "exeErrorCode": 0,
[2025-06-03 21:35:07]     "exeErrorDiag": "",
[2025-06-03 21:35:07]     "pilotErrorCode": 0,
[2025-06-03 21:35:07]     "pilotErrorDiag": "",
[2025-06-03 21:35:07]  *** Listing of results directory ***
[2025-06-03 21:35:07] total 389860
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 14:58 queuedata.json
[2025-06-03 21:35:07] -rwx------. 1 boincer umatlas     37140 Jun  3 15:00 runpilot2-wrapper.sh
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas       100 Jun  3 18:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:35:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 18:32 run_atlas
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas       105 Jun  3 18:32 job.xml
[2025-06-03 21:35:07] -rw-r--r--. 2 boincer umatlas 215482225 Jun  3 18:32 EVNT.45006593._001728.pool.root.1
[2025-06-03 21:35:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:32 start_atlas.sh
[2025-06-03 21:35:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 18:32 shared
[2025-06-03 21:35:07] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 18:32 input.tar.gz
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas         0 Jun  3 18:32 boinc_lockfile
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas      2522 Jun  3 18:32 pandaJob.out
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas    986861 Jun  3 18:32 agis_schedconf.cvmfs.json
[2025-06-03 21:35:07] drwx------. 4 boincer umatlas      4096 Jun  3 18:32 pilot3
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas      6858 Jun  3 21:29 init_data.xml
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas 177215412 Jun  3 21:33 HITS.45006595._043097.pool.root.1
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas       531 Jun  3 21:33 boinc_task_state.xml
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas      1040 Jun  3 21:34 memory_monitor_summary.json
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:34 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas    355231 Jun  3 21:34 log.45006595._043097.job.log.tgz.1
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas        95 Jun  3 21:34 pilot_heartbeat.json
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas      7723 Jun  3 21:34 heartbeat.json
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:35 boinc_mmap_file
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas        28 Jun  3 21:35 wrapper_checkpoint.txt
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas      4353 Jun  3 21:35 pilotlog.txt
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas    984750 Jun  3 21:35 log.45006595._043097.job.log.1
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas       357 Jun  3 21:35 output.list
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:35 runtime_log
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas   1361920 Jun  3 21:35 result.tar.gz
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas       656 Jun  3 21:35 rVPLDmf3lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUolKDmYTGZ4n.diag
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas      8670 Jun  3 21:35 runtime_log.err
[2025-06-03 21:35:07] -rw-r--r--. 1 boincer umatlas     20726 Jun  3 21:35 stderr.txt
[2025-06-03 21:35:07] HITS file was successfully produced:
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas 177215412 Jun  3 21:33 shared/HITS.pool.root.1
[2025-06-03 21:35:07]  *** Contents of shared directory: ***
[2025-06-03 21:35:07] total 385352
[2025-06-03 21:35:07] -rw-r--r--. 2 boincer umatlas 215482225 Jun  3 18:32 ATLAS.root_0
[2025-06-03 21:35:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:32 start_atlas.sh
[2025-06-03 21:35:07] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 18:32 input.tar.gz
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas 177215412 Jun  3 21:33 HITS.pool.root.1
[2025-06-03 21:35:07] -rw-------. 1 boincer umatlas   1361920 Jun  3 21:35 result.tar.gz
21:35:08 (1145956): run_atlas exited; CPU time 78885.899253
21:35:08 (1145956): called boinc_finish(0)

</stderr_txt>
]]>

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