Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:43:36 (19823): wrapper (7.7.26015): starting
08:43:36 (19823): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:43:36] Arguments: --nthreads 8
[2025-06-04 08:43:36] Threads: 8
[2025-06-04 08:43:36] Checking for CVMFS
[2025-06-04 08:43:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:43:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:43:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:43:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:43:38] 2.11.2.0 5632 32857 94044 146770 3 93 20562871 25165825 3748 130560 0 16753323 99.782 19899595 2132 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 08:43:38] CVMFS is ok
[2025-06-04 08:43:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:43:38] Checking for apptainer binary...
[2025-06-04 08:43:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:43:38] Running /usr/bin/apptainer --version
[2025-06-04 08:43:38] apptainer version 1.3.2-1.el7
[2025-06-04 08:43:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:43:48] cg-vwn252.simple-grid.lan
[2025-06-04 08:43:48] apptainer works
[2025-06-04 08:43:48] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:43:48] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:43:48] Starting ATLAS job with PandaID=6677975741
[2025-06-04 08:43:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:48:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:48:59] 2025-06-04 10:42:56,233 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:48:59] 2025-06-04 10:42:56,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:48:59] 2025-06-04 10:42:56,233 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:48:59] 2025-06-04 10:42:56,238 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:48:59] 2025-06-04 10:42:56,239 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,241 | INFO     | sum of deviations: 55922521467.0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,241 | INFO     | mean x: 1749026872.0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,241 | INFO     | mean y: 2438669.9417040357
[2025-06-04 12:48:59] 2025-06-04 10:42:56,242 | INFO     | -- intersect: -28442103444.47751
[2025-06-04 12:48:59] 2025-06-04 10:42:56,242 | INFO     | intersect: -28442103444.47751
[2025-06-04 12:48:59] 2025-06-04 10:42:56,242 | INFO     | chi2: 5.2344203704156245
[2025-06-04 12:48:59] 2025-06-04 10:42:56,243 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 12:48:59] 2025-06-04 10:42:56,244 | INFO     | sum of deviations: 69137858232.00002
[2025-06-04 12:48:59] 2025-06-04 10:42:56,245 | INFO     | mean x: 1749026719.5
[2025-06-04 12:48:59] 2025-06-04 10:42:56,245 | INFO     | mean y: 2447400.788990826
[2025-06-04 12:48:59] 2025-06-04 10:42:56,245 | INFO     | -- intersect: -37639631408.79533
[2025-06-04 12:48:59] 2025-06-04 10:42:56,245 | INFO     | intersect: -37639631408.79533
[2025-06-04 12:48:59] 2025-06-04 10:42:56,245 | INFO     | chi2: 4.5039944412910575
[2025-06-04 12:48:59] 2025-06-04 10:42:56,246 | INFO     | current chi2=4.5039944412910575 (change=13.954284857457283 %)
[2025-06-04 12:48:59] 2025-06-04 10:42:56,246 | INFO     | right removable region: 217
[2025-06-04 12:48:59] 2025-06-04 10:42:56,246 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 12:48:59] 2025-06-04 10:42:56,248 | INFO     | sum of deviations: -14670366013.5
[2025-06-04 12:48:59] 2025-06-04 10:42:56,248 | INFO     | mean x: 1749027024.5
[2025-06-04 12:48:59] 2025-06-04 10:42:56,248 | INFO     | mean y: 2486180.3256880734
[2025-06-04 12:48:59] 2025-06-04 10:42:56,249 | INFO     | -- intersect: 7989762385.6532545
[2025-06-04 12:48:59] 2025-06-04 10:42:56,249 | INFO     | intersect: 7989762385.6532545
[2025-06-04 12:48:59] 2025-06-04 10:42:56,249 | INFO     | chi2: 1.238592658400683
[2025-06-04 12:48:59] 2025-06-04 10:42:56,249 | INFO     | current chi2=1.238592658400683 (change=76.33753938829456 %)
[2025-06-04 12:48:59] 2025-06-04 10:42:56,250 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,252 | INFO     | sum of deviations: -30103662016.000004
[2025-06-04 12:48:59] 2025-06-04 10:42:56,252 | INFO     | mean x: 1749027177.0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,252 | INFO     | mean y: 2496962.9577464787
[2025-06-04 12:48:59] 2025-06-04 10:42:56,252 | INFO     | -- intersect: 17573972225.114807
[2025-06-04 12:48:59] 2025-06-04 10:42:56,252 | INFO     | intersect: 17573972225.114807
[2025-06-04 12:48:59] 2025-06-04 10:42:56,253 | INFO     | chi2: 0.9088768570521342
[2025-06-04 12:48:59] 2025-06-04 10:42:56,253 | INFO     | current chi2=0.9088768570521342 (change=26.620196649178446 %)
[2025-06-04 12:48:59] 2025-06-04 10:42:56,253 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,255 | INFO     | sum of deviations: -22917524777.5
[2025-06-04 12:48:59] 2025-06-04 10:42:56,255 | INFO     | mean x: 1749027329.5
[2025-06-04 12:48:59] 2025-06-04 10:42:56,255 | INFO     | mean y: 2491639.514423077
[2025-06-04 12:48:59] 2025-06-04 10:42:56,255 | INFO     | -- intersect: 14367501044.850126
[2025-06-04 12:48:59] 2025-06-04 10:42:56,255 | INFO     | intersect: 14367501044.850126
[2025-06-04 12:48:59] 2025-06-04 10:42:56,256 | INFO     | chi2: 0.883602370424519
[2025-06-04 12:48:59] 2025-06-04 10:42:56,256 | INFO     | current chi2=0.883602370424519 (change=2.780848299910606 %)
[2025-06-04 12:48:59] 2025-06-04 10:42:56,256 | INFO     | left removable region: 30
[2025-06-04 12:48:59] 2025-06-04 10:42:56,256 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,258 | INFO     | sum of deviations: 4315796482.0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,258 | INFO     | mean x: 1749027604.0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,258 | INFO     | mean y: 2491272.7754010693
[2025-06-04 12:48:59] 2025-06-04 10:42:56,258 | INFO     | -- intersect: -3720283793.0364037
[2025-06-04 12:48:59] 2025-06-04 10:42:56,258 | INFO     | intersect: -3720283793.0364037
[2025-06-04 12:48:59] 2025-06-04 10:42:56,259 | INFO     | chi2: 0.00010386033557473849
[2025-06-04 12:48:59] 2025-06-04 10:42:56,259 | INFO     | -- intersect: -3720283793.0364037
[2025-06-04 12:48:59] 2025-06-04 10:42:56,259 | INFO     | current memory leak: 2.13 B/s (using 187 data points, chi2=0.00)
[2025-06-04 12:48:59] 2025-06-04 10:42:56,260 | INFO     | ..............................
[2025-06-04 12:48:59] 2025-06-04 10:42:56,260 | INFO     | . Timing measurements:
[2025-06-04 12:48:59] 2025-06-04 10:42:56,260 | INFO     | . get job = 0 s
[2025-06-04 12:48:59] 2025-06-04 10:42:56,260 | INFO     | . initial setup = 4 s
[2025-06-04 12:48:59] 2025-06-04 10:42:56,260 | INFO     | . payload setup = 153 s
[2025-06-04 12:48:59] 2025-06-04 10:42:56,260 | INFO     | . stage-in = 0 s
[2025-06-04 12:48:59] 2025-06-04 10:42:56,261 | INFO     | . payload execution = 13733 s
[2025-06-04 12:48:59] 2025-06-04 10:42:56,261 | INFO     | . stage-out = 3 s
[2025-06-04 12:48:59] 2025-06-04 10:42:56,261 | INFO     | . log creation = 0 s
[2025-06-04 12:48:59] 2025-06-04 10:42:56,261 | INFO     | ..............................
[2025-06-04 12:48:59] 2025-06-04 10:42:56,433 | INFO     | 
[2025-06-04 12:48:59] 2025-06-04 10:42:56,433 | INFO     | job summary report
[2025-06-04 12:48:59] 2025-06-04 10:42:56,433 | INFO     | --------------------------------------------------
[2025-06-04 12:48:59] 2025-06-04 10:42:56,433 | INFO     | PanDA job id: 6677975741
[2025-06-04 12:48:59] 2025-06-04 10:42:56,433 | INFO     | task id: 45006595
[2025-06-04 12:48:59] 2025-06-04 10:42:56,433 | INFO     | errors: (none)
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | pilot state: finished 
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | transexitcode: 0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | exeerrorcode: 0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | exeerrordiag: 
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | exitcode: 0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | exitmsg: OK
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | cpuconsumptiontime: 49834 s
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | nevents: 400
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | neventsw: 0
[2025-06-04 12:48:59] 2025-06-04 10:42:56,434 | INFO     | pid: 31366
[2025-06-04 12:48:59] 2025-06-04 10:42:56,435 | INFO     | pgrp: 31366
[2025-06-04 12:48:59] 2025-06-04 10:42:56,435 | INFO     | corecount: 8
[2025-06-04 12:48:59] 2025-06-04 10:42:56,435 | INFO     | event service: False
[2025-06-04 12:48:59] 2025-06-04 10:42:56,435 | INFO     | sizes: {0: 2405014, 1: 2405213, 12: 2405213, 23: 2405241, 34: 2405269, 44: 2405297, 55: 2405453, 66: 2405481, 77: 2405509, 87: 2405565, 89: 2405799, 98: 2406107, 1
[2025-06-04 12:48:59] 2025-06-04 10:42:56,435 | INFO     | --------------------------------------------------
[2025-06-04 12:48:59] 2025-06-04 10:42:56,435 | INFO     | 
[2025-06-04 12:48:59] 2025-06-04 10:42:56,435 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-04 12:48:59] 2025-06-04 10:42:56,467 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,467 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,469 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:48:59] 2025-06-04 10:42:56,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,469 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:48:59] 2025-06-04 10:42:56,470 | INFO     | job 6677975741 has completed (purged errors)
[2025-06-04 12:48:59] 2025-06-04 10:42:56,470 | INFO     | overall cleanup function is called
[2025-06-04 12:48:59] 2025-06-04 10:42:57,030 | INFO     | PID=24693 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 12:48:59] 2025-06-04 10:42:57,030 | INFO     | .. there are 9 such processes running
[2025-06-04 12:48:59] 2025-06-04 10:42:57,479 | INFO     | --- collectZombieJob: --- 10, [31366]
[2025-06-04 12:48:59] 2025-06-04 10:42:57,480 | INFO     | zombie collector waiting for pid 31366
[2025-06-04 12:48:59] 2025-06-04 10:42:57,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:48:59] 2025-06-04 10:42:57,480 | INFO     | collected zombie processes
[2025-06-04 12:48:59] 2025-06-04 10:42:57,480 | INFO     | will attempt to kill all subprocesses of pid=31366
[2025-06-04 12:48:59] 2025-06-04 10:42:57,605 | INFO     | process IDs to be killed: [31366] (in reverse order)
[2025-06-04 12:48:59] 2025-06-04 10:42:58,295 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:48:59] 2025-06-04 10:42:58,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:48:59] 2025-06-04 10:42:58,299 | INFO     | did not find any defunct processes belonging to 31366
[2025-06-04 12:48:59] 2025-06-04 10:42:58,303 | INFO     | did not find any defunct processes belonging to 31366
[2025-06-04 12:48:59] 2025-06-04 10:42:58,303 | INFO     | ready for new job
[2025-06-04 12:48:59] 2025-06-04 10:42:58,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:48:59] 2025-06-04 10:42:58,314 | INFO     | **************************************
[2025-06-04 12:48:59] 2025-06-04 10:42:58,314 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:48:59] 2025-06-04 10:42:58,315 | INFO     | **************************************
[2025-06-04 12:48:59] 2025-06-04 10:42:58,315 | INFO     | 
[2025-06-04 12:48:59] 2025-06-04 10:42:58,315 | INFO     | pilot is running in a VM
[2025-06-04 12:48:59] 2025-06-04 10:42:58,315 | INFO     | architecture information:
[2025-06-04 12:48:59] 2025-06-04 10:42:58,323 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:48:59] 2025-06-04 10:42:58,527 | INFO     | cat /etc/os-release:
[2025-06-04 12:48:59] NAME="CentOS Linux"
[2025-06-04 12:48:59] VERSION="7 (Core)"
[2025-06-04 12:48:59] ID="centos"
[2025-06-04 12:48:59] ID_LIKE="rhel fedora"
[2025-06-04 12:48:59] VERSION_ID="7"
[2025-06-04 12:48:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:48:59] ANSI_COLOR="0;31"
[2025-06-04 12:48:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:48:59] HOME_URL="https://www.centos.org/"
[2025-06-04 12:48:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:48:59] 
[2025-06-04 12:48:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:48:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:48:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:48:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:48:59] 
[2025-06-04 12:48:59] 2025-06-04 10:42:58,527 | INFO     | **************************************
[2025-06-04 12:48:59] 2025-06-04 10:42:59,031 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-04 12:48:59] 2025-06-04 10:42:59,282 | INFO     | sufficient remaining disk space (496673751040 B)
[2025-06-04 12:48:59] 2025-06-04 10:42:59,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:48:59] 2025-06-04 10:42:59,283 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:48:59] 2025-06-04 10:42:59,283 | INFO     | update_server=False
[2025-06-04 12:48:59] 2025-06-04 10:42:59,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:48:59] 2025-06-04 10:42:59,283 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:48:59] 2025-06-04 10:42:59,284 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:48:59] 2025-06-04 10:42:59,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:48:59] 2025-06-04 10:42:59,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:48:59] 2025-06-04 10:42:59,539 | INFO     | all data control threads have been joined
[2025-06-04 12:48:59] 2025-06-04 10:42:59,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:48:59] 2025-06-04 10:42:59,843 | INFO     | aborting loop
[2025-06-04 12:48:59] 2025-06-04 10:42:59,876 | INFO     | all payload control threads have been joined
[2025-06-04 12:48:59] 2025-06-04 10:42:59,896 | INFO     | all job control threads have been joined
[2025-06-04 12:48:59] 2025-06-04 10:43:00,289 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:00,307 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:00,477 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:00,547 | INFO     | [data] control thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:00,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:48:59] 2025-06-04 10:43:00,849 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:00,882 | INFO     | [payload] control thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:00,902 | INFO     | [job] control thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:00,985 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:01,188 | INFO     | [job] validate thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:01,316 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:01,430 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:01,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:48:59] 2025-06-04 10:43:01,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:01,615 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:02,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:48:59] 2025-06-04 10:43:02,456 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:02,767 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:06,359 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:48:59] 2025-06-04 10:43:07,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140420864194368)>', '<ExcThread(monitor, started 140420549940992)>']
[2025-06-04 12:48:59] 2025-06-04 10:43:07,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:48:59] 2025-06-04 10:43:07,333 | INFO     | [monitor] control thread has ended
[2025-06-04 12:48:59] 2025-06-04 10:43:12,229 | INFO     | all workflow threads have been joined
[2025-06-04 12:48:59] 2025-06-04 10:43:12,230 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:48:59] 2025-06-04 10:43:12,230 | INFO     | traces error code: 0
[2025-06-04 12:48:59] 2025-06-04 10:43:12,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:48:59] 2025-06-04 10:43:12,618 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:48:59] 2025-06-04 10:43:12,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:48:59] 2025-06-04 10:43:12,837 [wrapper] pilotpid: 24693
[2025-06-04 12:48:59] 2025-06-04 10:43:12,931 [wrapper] Pilot exit status: 0
[2025-06-04 12:48:59] 2025-06-04 10:43:13,365 [wrapper] pandaids: 6677975741
[2025-06-04 12:48:59] 2025-06-04 10:43:14,218 [wrapper] cleanup supervisor_pilot 12251 24694
[2025-06-04 12:48:59] 2025-06-04 10:43:14,267 [wrapper] Test setup, not cleaning
[2025-06-04 12:48:59] 2025-06-04 10:43:14,365 [wrapper] apfmon messages muted
[2025-06-04 12:48:59] 2025-06-04 10:43:14,484 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:48:59] 2025-06-04 10:43:14,565 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:48:59]  *** Error codes and diagnostics ***
[2025-06-04 12:48:59]     "exeErrorCode": 0,
[2025-06-04 12:48:59]     "exeErrorDiag": "",
[2025-06-04 12:48:59]     "pilotErrorCode": 0,
[2025-06-04 12:48:59]     "pilotErrorDiag": "",
[2025-06-04 12:48:59]  *** Listing of results directory ***
[2025-06-04 12:48:59] total 396232
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:58 queuedata.json
[2025-06-04 12:48:59] -rwx------. 1 boinc boinc     37140 Jun  3 21:00 runpilot2-wrapper.sh
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc       100 Jun  4 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:48:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 08:43 run_atlas
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc       105 Jun  4 08:43 job.xml
[2025-06-04 12:48:59] -rw-r--r--. 2 boinc boinc 217835480 Jun  4 08:43 EVNT.45006593._001716.pool.root.1
[2025-06-04 12:48:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 08:43 start_atlas.sh
[2025-06-04 12:48:59] drwxrwx--x. 2 boinc boinc        68 Jun  4 08:43 shared
[2025-06-04 12:48:59] -rw-r--r--. 2 boinc boinc    508884 Jun  4 08:43 input.tar.gz
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc      6391 Jun  4 08:43 init_data.xml
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc         0 Jun  4 08:43 boinc_lockfile
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc      2525 Jun  4 08:43 pandaJob.out
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc    986745 Jun  4 08:46 agis_schedconf.cvmfs.json
[2025-06-04 12:48:59] drwx------. 4 boinc boinc      4096 Jun  4 08:46 pilot3
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc 180908581 Jun  4 12:40 HITS.45006595._042833.pool.root.1
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc       530 Jun  4 12:40 boinc_task_state.xml
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc      1028 Jun  4 12:41 memory_monitor_summary.json
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc   1603667 Jun  4 12:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc    382972 Jun  4 12:41 log.45006595._042833.job.log.tgz.1
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc        95 Jun  4 12:42 pilot_heartbeat.json
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc      7689 Jun  4 12:42 heartbeat.json
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc      4540 Jun  4 12:43 pilotlog.txt
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc   1207958 Jun  4 12:43 log.45006595._042833.job.log.1
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc       357 Jun  4 12:43 output.list
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc       620 Jun  4 12:43 runtime_log
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc   1607680 Jun  4 12:43 result.tar.gz
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc      8673 Jun  4 12:43 runtime_log.err
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc       657 Jun  4 12:43 9XnNDmq2lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDnlKDmnaX9wm.diag
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:48 boinc_mmap_file
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:48 wrapper_checkpoint.txt
[2025-06-04 12:48:59] -rw-r--r--. 1 boinc boinc     20380 Jun  4 12:48 stderr.txt
[2025-06-04 12:48:59] HITS file was successfully produced:
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc 180908581 Jun  4 12:40 shared/HITS.pool.root.1
[2025-06-04 12:48:59]  *** Contents of shared directory: ***
[2025-06-04 12:48:59] total 391492
[2025-06-04 12:48:59] -rw-r--r--. 2 boinc boinc 217835480 Jun  4 08:43 ATLAS.root_0
[2025-06-04 12:48:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 08:43 start_atlas.sh
[2025-06-04 12:48:59] -rw-r--r--. 2 boinc boinc    508884 Jun  4 08:43 input.tar.gz
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc 180908581 Jun  4 12:40 HITS.pool.root.1
[2025-06-04 12:48:59] -rw-------. 1 boinc boinc   1607680 Jun  4 12:43 result.tar.gz
12:49:01 (19823): run_atlas exited; CPU time 50021.605657
12:49:01 (19823): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN