Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:32:35 (1334648): wrapper (7.7.26015): starting
18:32:35 (1334648): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:32:35] Arguments: --nthreads 8
[2025-06-03 18:32:35] Threads: 8
[2025-06-03 18:32:35] Checking for CVMFS
[2025-06-03 18:32:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:32:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:32:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:32:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:32:35] 2.12.6.0 4820 502 73072 146760 2 187 18687705 32935936 3524 16776704 0 2113389 99.997 158742 44304 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 18:32:35] CVMFS is ok
[2025-06-03 18:32:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:32:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:32:35] Further information can be found at the LHC@home message board.
[2025-06-03 18:32:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:32:35] Checking for apptainer binary...
[2025-06-03 18:32:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:32:35] Running /usr/bin/apptainer --version
[2025-06-03 18:32:35] apptainer version 1.4.1-1.el9
[2025-06-03 18:32:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:32:35] c-8-32.aglt2.org
[2025-06-03 18:32:35] apptainer works
[2025-06-03 18:32:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:32:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:32:35] Starting ATLAS job with PandaID=6677975786
[2025-06-03 18:32:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:45:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:45:19] 2025-06-04 06:44:59,596 | INFO     | PID=1338305 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 02:45:19] 2025-06-04 06:44:59,596 | INFO     | .. there are 28 such processes running
[2025-06-04 02:45:19] 2025-06-04 06:45:00,388 | INFO     | monitor loop #1362: job 0:6677975786 is in state 'finished'
[2025-06-04 02:45:19] 2025-06-04 06:45:00,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:45:19] 2025-06-04 06:45:02,897 | INFO     | monitor loop #1363: job 0:6677975786 is in state 'finished'
[2025-06-04 02:45:19] 2025-06-04 06:45:02,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:45:19] 2025-06-04 06:45:03,195 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 02:45:19] 2025-06-04 06:45:03,196 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677975786/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:45:19] 2025-06-04 06:45:03,196 | INFO     | extracted standard info from prmon json
[2025-06-04 02:45:19] 2025-06-04 06:45:03,196 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:45:19] 2025-06-04 06:45:03,197 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:45:19] 2025-06-04 06:45:03,197 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:45:19] 2025-06-04 06:45:03,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:45:19] 2025-06-04 06:45:03,321 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:45:19] 2025-06-04 06:45:03,321 | INFO     | sum of square deviations: 35155994736.44612
[2025-06-04 02:45:19] 2025-06-04 06:45:03,466 | INFO     | sum of deviations: 29899144820.49591
[2025-06-04 02:45:19] 2025-06-04 06:45:03,466 | INFO     | mean x: 1749004723.1404958
[2025-06-04 02:45:19] 2025-06-04 06:45:03,466 | INFO     | mean y: 2024275.6838842975
[2025-06-04 02:45:19] 2025-06-04 06:45:03,466 | INFO     | -- intersect: -1485453063.5562499
[2025-06-04 02:45:19] 2025-06-04 06:45:03,467 | INFO     | intersect: -1485453063.5562499
[2025-06-04 02:45:19] 2025-06-04 06:45:03,467 | INFO     | chi2: 5.1977661400016135
[2025-06-04 02:45:19] 2025-06-04 06:45:03,468 | INFO     | sum of square deviations: 34077872487.849716
[2025-06-04 02:45:19] 2025-06-04 06:45:03,498 | INFO     | sum of deviations: 76935898050.92896
[2025-06-04 02:45:19] 2025-06-04 06:45:03,499 | INFO     | mean x: 1749004570.65762
[2025-06-04 02:45:19] 2025-06-04 06:45:03,499 | INFO     | mean y: 2030885.0605427974
[2025-06-04 02:45:19] 2025-06-04 06:45:03,499 | INFO     | -- intersect: -3946608731.0628085
[2025-06-04 02:45:19] 2025-06-04 06:45:03,499 | INFO     | intersect: -3946608731.0628085
[2025-06-04 02:45:19] 2025-06-04 06:45:03,500 | INFO     | chi2: 3.9069932941443106
[2025-06-04 02:45:19] 2025-06-04 06:45:03,531 | INFO     | current chi2=3.9069932941443106 (change=24.833222793992462 %)
[2025-06-04 02:45:19] 2025-06-04 06:45:03,531 | INFO     | right removable region: 478
[2025-06-04 02:45:19] 2025-06-04 06:45:03,532 | INFO     | sum of square deviations: 34077388147.84972
[2025-06-04 02:45:19] 2025-06-04 06:45:03,543 | INFO     | sum of deviations: -63013287313.83931
[2025-06-04 02:45:19] 2025-06-04 06:45:03,543 | INFO     | mean x: 1749004875.65762
[2025-06-04 02:45:19] 2025-06-04 06:45:03,543 | INFO     | mean y: 2037394.4217118998
[2025-06-04 02:45:19] 2025-06-04 06:45:03,543 | INFO     | -- intersect: 3236162799.36633
[2025-06-04 02:45:19] 2025-06-04 06:45:03,543 | INFO     | intersect: 3236162799.36633
[2025-06-04 02:45:19] 2025-06-04 06:45:03,581 | INFO     | chi2: 2.9907105781278185
[2025-06-04 02:45:19] 2025-06-04 06:45:03,581 | INFO     | current chi2=2.9907105781278185 (change=42.46161721067947 %)
[2025-06-04 02:45:19] 2025-06-04 06:45:03,582 | INFO     | sum of square deviations: 33021061046.466274
[2025-06-04 02:45:19] 2025-06-04 06:45:03,598 | INFO     | sum of deviations: -115471862018.21938
[2025-06-04 02:45:19] 2025-06-04 06:45:03,598 | INFO     | mean x: 1749005028.1751056
[2025-06-04 02:45:19] 2025-06-04 06:45:03,599 | INFO     | mean y: 2044954.388185654
[2025-06-04 02:45:19] 2025-06-04 06:45:03,599 | INFO     | -- intersect: 6118167843.304875
[2025-06-04 02:45:19] 2025-06-04 06:45:03,599 | INFO     | intersect: 6118167843.304875
[2025-06-04 02:45:19] 2025-06-04 06:45:03,600 | INFO     | chi2: 2.2547528547483946
[2025-06-04 02:45:19] 2025-06-04 06:45:03,600 | INFO     | current chi2=2.2547528547483946 (change=24.60812252318085 %)
[2025-06-04 02:45:19] 2025-06-04 06:45:03,600 | INFO     | left removable region: 20
[2025-06-04 02:45:19] 2025-06-04 06:45:03,601 | INFO     | sum of square deviations: 29788404796.0022
[2025-06-04 02:45:19] 2025-06-04 06:45:03,652 | INFO     | sum of deviations: -48881229847.14408
[2025-06-04 02:45:19] 2025-06-04 06:45:03,689 | INFO     | mean x: 1749005150.2336245
[2025-06-04 02:45:19] 2025-06-04 06:45:03,690 | INFO     | mean y: 2048722.5807860263
[2025-06-04 02:45:19] 2025-06-04 06:45:03,690 | INFO     | -- intersect: 2872075611.83141
[2025-06-04 02:45:19] 2025-06-04 06:45:03,690 | INFO     | intersect: 2872075611.83141
[2025-06-04 02:45:19] 2025-06-04 06:45:03,690 | INFO     | chi2: 0.8744516432507028
[2025-06-04 02:45:19] 2025-06-04 06:45:03,691 | INFO     | -- intersect: 2872075611.83141
[2025-06-04 02:45:19] 2025-06-04 06:45:03,691 | INFO     | current memory leak: -1.64 B/s (using 458 data points, chi2=0.87)
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | ..............................
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | . Timing measurements:
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | . get job = 0 s
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | . initial setup = 2 s
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | . payload setup = 5 s
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | . stage-in = 0 s
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | . payload execution = 29469 s
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | . stage-out = 6 s
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | . log creation = 1 s
[2025-06-04 02:45:19] 2025-06-04 06:45:03,692 | INFO     | ..............................
[2025-06-04 02:45:19] 2025-06-04 06:45:04,577 | INFO     | 
[2025-06-04 02:45:19] 2025-06-04 06:45:04,578 | INFO     | job summary report
[2025-06-04 02:45:19] 2025-06-04 06:45:04,578 | INFO     | --------------------------------------------------
[2025-06-04 02:45:19] 2025-06-04 06:45:04,578 | INFO     | PanDA job id: 6677975786
[2025-06-04 02:45:19] 2025-06-04 06:45:04,578 | INFO     | task id: 45006595
[2025-06-04 02:45:19] 2025-06-04 06:45:04,578 | INFO     | errors: (none)
[2025-06-04 02:45:19] 2025-06-04 06:45:04,578 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:45:19] 2025-06-04 06:45:04,578 | INFO     | pilot state: finished 
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | transexitcode: 0
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | exeerrorcode: 0
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | exeerrordiag: 
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | exitcode: 0
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | exitmsg: OK
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | cpuconsumptiontime: 40179 s
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | nevents: 400
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | neventsw: 0
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | pid: 1344833
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | pgrp: 1344833
[2025-06-04 02:45:19] 2025-06-04 06:45:04,579 | INFO     | corecount: 8
[2025-06-04 02:45:19] 2025-06-04 06:45:04,580 | INFO     | event service: False
[2025-06-04 02:45:19] 2025-06-04 06:45:04,580 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 29480: 2441451, 29487: 2450392, 29490: 2450576, 29524: 2450746}
[2025-06-04 02:45:19] 2025-06-04 06:45:04,580 | INFO     | --------------------------------------------------
[2025-06-04 02:45:19] 2025-06-04 06:45:04,580 | INFO     | 
[2025-06-04 02:45:19] 2025-06-04 06:45:04,580 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 02:45:19] 2025-06-04 06:45:04,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,725 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,726 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:45:19] 2025-06-04 06:45:04,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,727 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:45:19] 2025-06-04 06:45:04,727 | INFO     | job 6677975786 has completed (purged errors)
[2025-06-04 02:45:19] 2025-06-04 06:45:04,727 | INFO     | overall cleanup function is called
[2025-06-04 02:45:19] 2025-06-04 06:45:05,746 | INFO     | --- collectZombieJob: --- 10, [1344833]
[2025-06-04 02:45:19] 2025-06-04 06:45:05,746 | INFO     | zombie collector waiting for pid 1344833
[2025-06-04 02:45:19] 2025-06-04 06:45:05,746 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:45:19] 2025-06-04 06:45:05,747 | INFO     | collected zombie processes
[2025-06-04 02:45:19] 2025-06-04 06:45:05,747 | INFO     | will attempt to kill all subprocesses of pid=1344833
[2025-06-04 02:45:19] 2025-06-04 06:45:06,452 | INFO     | process IDs to be killed: [1344833] (in reverse order)
[2025-06-04 02:45:19] 2025-06-04 06:45:06,663 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:45:19] 2025-06-04 06:45:06,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:45:19] 2025-06-04 06:45:06,677 | INFO     | did not find any defunct processes belonging to 1344833
[2025-06-04 02:45:19] 2025-06-04 06:45:06,690 | INFO     | did not find any defunct processes belonging to 1344833
[2025-06-04 02:45:19] 2025-06-04 06:45:06,691 | INFO     | ready for new job
[2025-06-04 02:45:19] 2025-06-04 06:45:06,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:45:19] 2025-06-04 06:45:06,693 | INFO     | **************************************
[2025-06-04 02:45:19] 2025-06-04 06:45:06,693 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:45:19] 2025-06-04 06:45:06,693 | INFO     | **************************************
[2025-06-04 02:45:19] 2025-06-04 06:45:06,693 | INFO     | 
[2025-06-04 02:45:19] 2025-06-04 06:45:06,733 | INFO     | architecture information:
[2025-06-04 02:45:19] 2025-06-04 06:45:06,745 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:45:19] 2025-06-04 06:45:06,795 | INFO     | cat /etc/os-release:
[2025-06-04 02:45:19] NAME="CentOS Linux"
[2025-06-04 02:45:19] VERSION="7 (Core)"
[2025-06-04 02:45:19] ID="centos"
[2025-06-04 02:45:19] ID_LIKE="rhel fedora"
[2025-06-04 02:45:19] VERSION_ID="7"
[2025-06-04 02:45:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:45:19] ANSI_COLOR="0;31"
[2025-06-04 02:45:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:45:19] HOME_URL="https://www.centos.org/"
[2025-06-04 02:45:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:45:19] 
[2025-06-04 02:45:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:45:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:45:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:45:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:45:19] 
[2025-06-04 02:45:19] 2025-06-04 06:45:06,795 | INFO     | **************************************
[2025-06-04 02:45:19] 2025-06-04 06:45:07,308 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 02:45:19] 2025-06-04 06:45:07,491 | INFO     | sufficient remaining disk space (74227646464 B)
[2025-06-04 02:45:19] 2025-06-04 06:45:07,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:45:19] 2025-06-04 06:45:07,491 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:45:19] 2025-06-04 06:45:07,491 | INFO     | update_server=False
[2025-06-04 02:45:19] 2025-06-04 06:45:07,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:45:19] 2025-06-04 06:45:07,702 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:45:19] 2025-06-04 06:45:07,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:45:19] 2025-06-04 06:45:07,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:45:19] 2025-06-04 06:45:07,914 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 02:45:19] 2025-06-04 06:45:07,914 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 02:45:19] 2025-06-04 06:45:07,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:45:19] 2025-06-04 06:45:07,915 | INFO     | will abort loop
[2025-06-04 02:45:19] 2025-06-04 06:45:07,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:45:19] 2025-06-04 06:45:08,082 | INFO     | all payload control threads have been joined
[2025-06-04 02:45:19] 2025-06-04 06:45:08,485 | INFO     | all data control threads have been joined
[2025-06-04 02:45:19] 2025-06-04 06:45:08,497 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:08,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:45:19] 2025-06-04 06:45:08,686 | INFO     | all job control threads have been joined
[2025-06-04 02:45:19] 2025-06-04 06:45:08,805 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:08,920 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,038 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,062 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,082 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,087 | INFO     | [payload] control thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,310 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,451 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,498 | INFO     | [data] control thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:45:19] 2025-06-04 06:45:09,693 | INFO     | [job] control thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,735 | INFO     | [job] validate thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:09,765 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:10,543 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:10,620 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:11,962 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:45:19] 2025-06-04 06:45:12,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765021820736)>', '<ExcThread(monitor, started 139764393039616)>']
[2025-06-04 02:45:19] 2025-06-04 06:45:13,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:45:19] 2025-06-04 06:45:13,741 | INFO     | [monitor] control thread has ended
[2025-06-04 02:45:19] 2025-06-04 06:45:17,946 | INFO     | all workflow threads have been joined
[2025-06-04 02:45:19] 2025-06-04 06:45:17,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:45:19] 2025-06-04 06:45:17,947 | INFO     | traces error code: 0
[2025-06-04 02:45:19] 2025-06-04 06:45:17,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:45:19] 2025-06-04 06:45:18,793 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:45:19] 2025-06-04 06:45:18,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:45:19] 2025-06-04 06:45:18,967 [wrapper] pilotpid: 1338305
[2025-06-04 02:45:19] 2025-06-04 06:45:19,002 [wrapper] Pilot exit status: 0
[2025-06-04 02:45:19] 2025-06-04 06:45:19,113 [wrapper] pandaids: 6677975786
[2025-06-04 02:45:19] 2025-06-04 06:45:19,219 [wrapper] cleanup supervisor_pilot 3788912 1338306
[2025-06-04 02:45:19] 2025-06-04 06:45:19,222 [wrapper] Test setup, not cleaning
[2025-06-04 02:45:19] 2025-06-04 06:45:19,225 [wrapper] apfmon messages muted
[2025-06-04 02:45:19] 2025-06-04 06:45:19,228 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:45:19] 2025-06-04 06:45:19,230 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:45:19]  *** Error codes and diagnostics ***
[2025-06-04 02:45:20]     "exeErrorCode": 0,
[2025-06-04 02:45:20]     "exeErrorDiag": "",
[2025-06-04 02:45:20]     "pilotErrorCode": 0,
[2025-06-04 02:45:20]     "pilotErrorDiag": "",
[2025-06-04 02:45:20]  *** Listing of results directory ***
[2025-06-04 02:45:20] total 387612
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 14:58 queuedata.json
[2025-06-04 02:45:20] -rwx------. 1 boincer umatlas     37140 Jun  3 15:00 runpilot2-wrapper.sh
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas       100 Jun  3 18:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:45:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 18:32 run_atlas
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas       105 Jun  3 18:32 job.xml
[2025-06-04 02:45:20] -rw-r--r--. 2 boincer umatlas 213274933 Jun  3 18:32 EVNT.45006593._001718.pool.root.1
[2025-06-04 02:45:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:32 start_atlas.sh
[2025-06-04 02:45:20] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 18:32 shared
[2025-06-04 02:45:20] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 18:32 input.tar.gz
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas         0 Jun  3 18:32 boinc_lockfile
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 18:32 pandaJob.out
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas    986861 Jun  3 18:32 agis_schedconf.cvmfs.json
[2025-06-04 02:45:20] drwx------. 4 boincer umatlas      4096 Jun  3 18:32 pilot3
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas      6707 Jun  4 02:40 init_data.xml
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas 174922783 Jun  4 02:42 HITS.45006595._042877.pool.root.1
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas       531 Jun  4 02:42 boinc_task_state.xml
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas      1039 Jun  4 02:44 memory_monitor_summary.json
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas        95 Jun  4 02:44 pilot_heartbeat.json
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas   1603667 Jun  4 02:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas    480208 Jun  4 02:44 log.45006595._042877.job.log.tgz.1
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas      7713 Jun  4 02:45 heartbeat.json
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas      4539 Jun  4 02:45 pilotlog.txt
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 02:45 boinc_mmap_file
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas        28 Jun  4 02:45 wrapper_checkpoint.txt
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas   1960358 Jun  4 02:45 log.45006595._042877.job.log.1
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas       357 Jun  4 02:45 output.list
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:45 runtime_log
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas   2457600 Jun  4 02:45 result.tar.gz
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas      8650 Jun  4 02:45 runtime_log.err
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas       653 Jun  4 02:45 N2oKDmr2lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtnlKDmmDi5mm.diag
[2025-06-04 02:45:20] -rw-r--r--. 1 boincer umatlas     21191 Jun  4 02:45 stderr.txt
[2025-06-04 02:45:20] HITS file was successfully produced:
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas 174922783 Jun  4 02:42 shared/HITS.pool.root.1
[2025-06-04 02:45:20]  *** Contents of shared directory: ***
[2025-06-04 02:45:20] total 382028
[2025-06-04 02:45:20] -rw-r--r--. 2 boincer umatlas 213274933 Jun  3 18:32 ATLAS.root_0
[2025-06-04 02:45:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 18:32 start_atlas.sh
[2025-06-04 02:45:20] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 18:32 input.tar.gz
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas 174922783 Jun  4 02:42 HITS.pool.root.1
[2025-06-04 02:45:20] -rw-------. 1 boincer umatlas   2457600 Jun  4 02:45 result.tar.gz
02:45:22 (1334648): run_atlas exited; CPU time 41123.408595
02:45:22 (1334648): called boinc_finish(0)

</stderr_txt>
]]>

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