Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:43:19 (3150157): wrapper (7.7.26015): starting
15:43:19 (3150157): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 15:43:19] Arguments: --nthreads 12
[2025-06-03 15:43:19] Threads: 12
[2025-06-03 15:43:19] Checking for CVMFS
[2025-06-03 15:43:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:43:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:43:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:43:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:43:21] 2.11.5.0 2626420 23073 215412 146760 2 253 41321765 45568000 14156 130560 0 199628580 99.809 120412316 26596 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 15:43:21] CVMFS is ok
[2025-06-03 15:43:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:43:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:43:21] Further information can be found at the LHC@home message board.
[2025-06-03 15:43:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:43:21] Checking for apptainer binary...
[2025-06-03 15:43:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:43:21] Running /usr/bin/apptainer --version
[2025-06-03 15:43:21] apptainer version 1.4.0-1.el9
[2025-06-03 15:43:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:43:21] wns0126.triumf.lcg
[2025-06-03 15:43:21] apptainer works
[2025-06-03 15:43:21] Set ATHENA_PROC_NUMBER=12
[2025-06-03 15:43:21] Set ATHENA_CORE_NUMBER=12
[2025-06-03 15:43:21] Starting ATLAS job with PandaID=6678071428
[2025-06-03 15:43:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:46:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | WARNING  | found no stored workdir sizes
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | WARNING  | wrong length of table data, x=[1748990650.0], y=[1637.0] (must be same and length>=4)
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | ..............................
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . Timing measurements:
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . get job = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . initial setup = 3 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . payload setup = 8 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . stage-in = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . payload execution = 23 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . stage-out = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . log creation = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | ..............................
[2025-06-03 15:46:46] 2025-06-03 22:46:34,406 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:46:46] 2025-06-03 22:46:34,406 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071428/pilotlog.txt
[2025-06-03 15:46:46] 2025-06-03 22:46:34,424 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 15:46:46] - Log from pilotlog.txt -
[2025-06-03 15:46:46] 2025-06-03 22:46:34,402 | INFO     | extracted standard info from prmon json
[2025-06-03 15:46:46] 2025-06-03 22:46:34,402 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:46:46] 2025-06-03 22:46:34,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:46:46] 2025-06-03 22:46:34,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | WARNING  | found no stored workdir sizes
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | WARNING  | wrong length of table data, x=[1748990650.0], y=[1637.0] (must be same and length>=4)
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | ..............................
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . Timing measurements:
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . get job = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . initial setup = 3 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . payload setup = 8 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . stage-in = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . payload execution = 23 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . stage-out = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . log creation = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | ..............................
[2025-06-03 15:46:46] 2025-06-03 22:46:34,406 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:46:46] 2025-06-03 22:46:34,406 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071428/pilotlog.txt
[2025-06-03 15:46:46] 2025-06-03 22:46:34,424 | WARNING  | 
[2025-06-03 15:46:46] [begin log extracts]
[2025-06-03 15:46:46] - Log from pilotlog.txt -
[2025-06-03 15:46:46] 2025-06-03 22:46:34,402 | INFO     | extracted standard info from prmon json
[2025-06-03 15:46:46] 2025-06-03 22:46:34,402 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:46:46] 2025-06-03 22:46:34,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:46:46] 2025-06-03 22:46:34,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | WARNING  | found no stored workdir sizes
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 15:46:46] 2025-06-03 22:46:34,403 | WARNING  | wrong length of table data, x=[1748990650.0], y=[1637.0] (must be same and length>=4)
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | ..............................
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . Timing measurements:
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . get job = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . initial setup = 3 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . payload setup = 8 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . stage-in = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . payload execution = 23 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . stage-out = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | . log creation = 0 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,404 | INFO     | ..............................
[2025-06-03 15:46:46] 2025-06-03 22:46:34,406 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 15:46:46] 2025-06-03 22:46:34,406 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678071428/pilotlog.txt
[2025-06-03 15:46:46] [end log extracts]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,425 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 15:46:46] 2025-06-03 22:46:34,426 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 15:46:46] 2025-06-03 22:46:34,661 | INFO     | 
[2025-06-03 15:46:46] 2025-06-03 22:46:34,662 | INFO     | job summary report
[2025-06-03 15:46:46] 2025-06-03 22:46:34,662 | INFO     | --------------------------------------------------
[2025-06-03 15:46:46] 2025-06-03 22:46:34,662 | INFO     | PanDA job id: 6678071428
[2025-06-03 15:46:46] 2025-06-03 22:46:34,662 | INFO     | task id: 45006595
[2025-06-03 15:46:46] 2025-06-03 22:46:34,662 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 15:44:22,841 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 15:46:46] 2025-06-03 22:46:34,662 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | pilot state: failed 
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | transexitcode: 65
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | exeerrorcode: 65
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | exitcode: 65
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | cpuconsumptiontime: 19 s
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | nevents: 0
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | neventsw: 0
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | pid: 3160035
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | pgrp: 3160035
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | corecount: 12
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | event service: False
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | sizes: {0: 2405010, 1: 2405209, 7: 2405415, 12: 2405443, 36: 2432883, 38: 2432883, 160: 2433153}
[2025-06-03 15:46:46] 2025-06-03 22:46:34,663 | INFO     | --------------------------------------------------
[2025-06-03 15:46:46] 2025-06-03 22:46:34,664 | INFO     | 
[2025-06-03 15:46:46] 2025-06-03 22:46:34,664 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 15:46:46] 2025-06-03 22:46:34,688 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,689 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | job 6678071428 has completed (purged errors)
[2025-06-03 15:46:46] 2025-06-03 22:46:34,690 | INFO     | overall cleanup function is called
[2025-06-03 15:46:46] 2025-06-03 22:46:34,867 | INFO     | PID=3153725 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 15:46:46] 2025-06-03 22:46:34,867 | INFO     | .. there are 21 such processes running
[2025-06-03 15:46:46] 2025-06-03 22:46:35,698 | INFO     | --- collectZombieJob: --- 10, [3160035]
[2025-06-03 15:46:46] 2025-06-03 22:46:35,699 | INFO     | zombie collector waiting for pid 3160035
[2025-06-03 15:46:46] 2025-06-03 22:46:35,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:46:46] 2025-06-03 22:46:35,699 | INFO     | collected zombie processes
[2025-06-03 15:46:46] 2025-06-03 22:46:35,699 | INFO     | will attempt to kill all subprocesses of pid=3160035
[2025-06-03 15:46:46] 2025-06-03 22:46:35,929 | INFO     | process IDs to be killed: [3160035] (in reverse order)
[2025-06-03 15:46:46] 2025-06-03 22:46:36,003 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:46:46] 2025-06-03 22:46:36,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:46:46] 2025-06-03 22:46:36,012 | INFO     | did not find any defunct processes belonging to 3160035
[2025-06-03 15:46:46] 2025-06-03 22:46:36,019 | INFO     | did not find any defunct processes belonging to 3160035
[2025-06-03 15:46:46] 2025-06-03 22:46:36,019 | INFO     | ready for new job
[2025-06-03 15:46:46] 2025-06-03 22:46:36,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:46:46] 2025-06-03 22:46:36,022 | INFO     | **************************************
[2025-06-03 15:46:46] 2025-06-03 22:46:36,022 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:46:46] 2025-06-03 22:46:36,022 | INFO     | **************************************
[2025-06-03 15:46:46] 2025-06-03 22:46:36,022 | INFO     | 
[2025-06-03 15:46:46] 2025-06-03 22:46:36,025 | INFO     | architecture information:
[2025-06-03 15:46:46] 2025-06-03 22:46:36,025 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:46:46] 2025-06-03 22:46:36,038 | INFO     | cat /etc/os-release:
[2025-06-03 15:46:46] NAME="CentOS Linux"
[2025-06-03 15:46:46] VERSION="7 (Core)"
[2025-06-03 15:46:46] ID="centos"
[2025-06-03 15:46:46] ID_LIKE="rhel fedora"
[2025-06-03 15:46:46] VERSION_ID="7"
[2025-06-03 15:46:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:46:46] ANSI_COLOR="0;31"
[2025-06-03 15:46:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:46:46] HOME_URL="https://www.centos.org/"
[2025-06-03 15:46:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:46:46] 
[2025-06-03 15:46:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:46:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:46:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:46:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:46:46] 
[2025-06-03 15:46:46] 2025-06-03 22:46:36,039 | INFO     | **************************************
[2025-06-03 15:46:46] 2025-06-03 22:46:36,541 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 15:46:46] 2025-06-03 22:46:36,562 | INFO     | sufficient remaining disk space (1950282153984 B)
[2025-06-03 15:46:46] 2025-06-03 22:46:36,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:46:46] 2025-06-03 22:46:36,563 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:46:46] 2025-06-03 22:46:36,563 | INFO     | update_server=False
[2025-06-03 15:46:46] 2025-06-03 22:46:36,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:46:46] 2025-06-03 22:46:36,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:46:46] 2025-06-03 22:46:36,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:46:46] 2025-06-03 22:46:36,732 | INFO     | all payload control threads have been joined
[2025-06-03 15:46:46] 2025-06-03 22:46:36,806 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:46:46] 2025-06-03 22:46:36,839 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 15:46:46] 2025-06-03 22:46:36,840 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 15:46:46] 2025-06-03 22:46:36,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:46:46] 2025-06-03 22:46:36,840 | INFO     | will abort loop
[2025-06-03 15:46:46] 2025-06-03 22:46:36,879 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:46:46] 2025-06-03 22:46:36,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:46:46] 2025-06-03 22:46:36,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:46:46] 2025-06-03 22:46:37,069 | INFO     | all job control threads have been joined
[2025-06-03 15:46:46] 2025-06-03 22:46:37,461 | INFO     | all data control threads have been joined
[2025-06-03 15:46:46] 2025-06-03 22:46:37,568 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:37,569 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:37,717 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:37,738 | INFO     | [payload] control thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:37,784 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:37,800 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:37,844 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:38,075 | INFO     | [job] control thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:38,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:38,367 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:38,467 | INFO     | [data] control thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:38,755 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:38,812 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:38,823 | INFO     | [job] validate thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:38,973 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:40,570 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:46:46] 2025-06-03 22:46:41,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976172341056)>', '<ExcThread(monitor, started 139975643350784)>']
[2025-06-03 15:46:46] 2025-06-03 22:46:41,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:46:46] 2025-06-03 22:46:41,909 | INFO     | [monitor] control thread has ended
[2025-06-03 15:46:46] 2025-06-03 22:46:46,074 | INFO     | all workflow threads have been joined
[2025-06-03 15:46:46] 2025-06-03 22:46:46,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:46:46] 2025-06-03 22:46:46,075 | INFO     | traces error code: 0
[2025-06-03 15:46:46] 2025-06-03 22:46:46,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:46:46] 2025-06-03 22:46:46,300 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:46:46] 2025-06-03 22:46:46,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:46:46] 2025-06-03 22:46:46,304 [wrapper] pilotpid: 3153725
[2025-06-03 15:46:46] 2025-06-03 22:46:46,307 [wrapper] Pilot exit status: 0
[2025-06-03 15:46:46] 2025-06-03 22:46:46,315 [wrapper] pandaids: 6678071428
[2025-06-03 15:46:46] 2025-06-03 22:46:46,366 [wrapper] cleanup supervisor_pilot 3153731 3153726
[2025-06-03 15:46:46] 2025-06-03 22:46:46,381 [wrapper] Test setup, not cleaning
[2025-06-03 15:46:46] 2025-06-03 22:46:46,383 [wrapper] apfmon messages muted
[2025-06-03 15:46:46] 2025-06-03 22:46:46,386 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:46:46] 2025-06-03 22:46:46,388 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:46:46]  *** Error codes and diagnostics ***
[2025-06-03 15:46:46]     "exeErrorCode": 65,
[2025-06-03 15:46:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:46:46]     "pilotErrorCode": 1305,
[2025-06-03 15:46:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 15:46:46]  *** Listing of results directory ***
[2025-06-03 15:46:46] total 212980
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc    495897 Jun  3 13:36 pilot3.tar.gz
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:46 queuedata.json
[2025-06-03 15:46:46] -rwx------. 1 boinc boinc     37140 Jun  3 13:46 runpilot2-wrapper.sh
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:46:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:43 run_atlas
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:43 job.xml
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc      6596 Jun  3 15:43 init_data.xml
[2025-06-03 15:46:46] -rw-r--r--. 2 boinc boinc 214068568 Jun  3 15:43 EVNT.45006593._001813.pool.root.1
[2025-06-03 15:46:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:43 start_atlas.sh
[2025-06-03 15:46:46] drwxrwx--x. 2 boinc boinc      4096 Jun  3 15:43 shared
[2025-06-03 15:46:46] -rw-r--r--. 2 boinc boinc    508880 Jun  3 15:43 input.tar.gz
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:43 boinc_lockfile
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc      2525 Jun  3 15:43 pandaJob.out
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc    986861 Jun  3 15:43 agis_schedconf.cvmfs.json
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc   1603667 Jun  3 15:43 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:46:46] drwx------. 4 boinc boinc      4096 Jun  3 15:43 pilot3
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc       522 Jun  3 15:44 boinc_task_state.xml
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc       954 Jun  3 15:44 memory_monitor_summary.json
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc     20189 Jun  3 15:44 log.45006595._045197.job.log.tgz.1
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc      8327 Jun  3 15:46 heartbeat.json
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc        95 Jun  3 15:46 pilot_heartbeat.json
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:46 boinc_mmap_file
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc        22 Jun  3 15:46 wrapper_checkpoint.txt
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc      4538 Jun  3 15:46 pilotlog.txt
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc     74412 Jun  3 15:46 log.45006595._045197.job.log.1
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc       188 Jun  3 15:46 output.list
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:46 runtime_log
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc    112640 Jun  3 15:46 result.tar.gz
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc       644 Jun  3 15:46 zYVMDmvhng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv6lKDmMzDzHo.diag
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc      8484 Jun  3 15:46 runtime_log.err
[2025-06-03 15:46:46] -rw-r--r--. 1 boinc boinc     21582 Jun  3 15:46 stderr.txt
[2025-06-03 15:46:46] No HITS result produced
[2025-06-03 15:46:46]  *** Contents of shared directory: ***
[2025-06-03 15:46:46] total 209684
[2025-06-03 15:46:46] -rw-r--r--. 2 boinc boinc 214068568 Jun  3 15:43 ATLAS.root_0
[2025-06-03 15:46:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:43 start_atlas.sh
[2025-06-03 15:46:46] -rw-r--r--. 2 boinc boinc    508880 Jun  3 15:43 input.tar.gz
[2025-06-03 15:46:46] -rw-------. 1 boinc boinc    112640 Jun  3 15:46 result.tar.gz
15:46:48 (3150157): run_atlas exited; CPU time 24.844458
15:46:48 (3150157): called boinc_finish(0)

</stderr_txt>
]]>

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