Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:10:30 (1039918): wrapper (7.7.26015): starting
09:10:30 (1039918): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 09:10:30] Arguments: --nthreads 3
[2025-06-04 09:10:30] Threads: 3
[2025-06-04 09:10:30] Checking for CVMFS
[2025-06-04 09:10:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:10:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:10:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:10:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:10:30] 2.9.2.0 327532 2142 81256 146771 0 56 26113229 36864000 0 130560 0 1934428 99.993 521852 8086 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 09:10:30] CVMFS is ok
[2025-06-04 09:10:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:10:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:10:30] Further information can be found at the LHC@home message board.
[2025-06-04 09:10:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:10:30] Checking for apptainer binary...
[2025-06-04 09:10:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:10:30] Running /usr/bin/apptainer --version
[2025-06-04 09:10:30] apptainer version 1.3.6-6.1
[2025-06-04 09:10:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:10:30] thA331a
[2025-06-04 09:10:30] apptainer works
[2025-06-04 09:10:30] Set ATHENA_PROC_NUMBER=3
[2025-06-04 09:10:30] Set ATHENA_CORE_NUMBER=3
[2025-06-04 09:10:30] Starting ATLAS job with PandaID=6677921350
[2025-06-04 09:10:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:27:26]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:27:26]  guid=cd085e61-11a2-4a21-8cdb-670134a6ae78
[2025-06-04 10:27:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:27:26]  is_altstaged=None
[2025-06-04 10:27:26]  is_tar=False
[2025-06-04 10:27:26]  lfn=log.45006595._042561.job.log.tgz.1
[2025-06-04 10:27:26]  mtime=0
[2025-06-04 10:27:26]  protocol_id=None
[2025-06-04 10:27:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:27:26]  replicas=None
[2025-06-04 10:27:26]  scope=mc23_13p6TeV
[2025-06-04 10:27:26]  status=None
[2025-06-04 10:27:26]  status_code=0
[2025-06-04 10:27:26]  storage_token=
[2025-06-04 10:27:26]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677921350/log.45006595._042561.job.log.tgz.1
[2025-06-04 10:27:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/c8/log.45006595._042561.job.log.tgz.1
[2025-06-04 10:27:26]  workdir=None
[2025-06-04 10:27:26] ]
[2025-06-04 10:27:26] 2025-06-04 08:26:59,996 | INFO     | transferring file log.45006595._042561.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677921350/log.45006595._042561.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 10:27:26] 2025-06-04 08:26:59,996 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677921350/log.45006595._042561.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0425
[2025-06-04 10:27:26] 2025-06-04 08:27:00,009 | INFO     | adding to output.list: log.45006595._042561.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/c8/log.45006595._042561.job.log.tg
[2025-06-04 10:27:26] 2025-06-04 08:27:00,010 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:27:26] 2025-06-04 08:27:00,010 | INFO     | summary of transferred files:
[2025-06-04 10:27:26] 2025-06-04 08:27:00,010 | INFO     |  -- lfn=log.45006595._042561.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:27:26] 2025-06-04 08:27:00,010 | INFO     | stage-out finished correctly
[2025-06-04 10:27:26] 2025-06-04 08:27:01,996 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:27:26] 2025-06-04 08:27:02,963 | WARNING  | process 1050048 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:27:26] 2025-06-04 08:27:02,963 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677921350/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:27:26] 2025-06-04 08:27:02,997 | INFO     | number of running child processes to parent process 1050048: 1
[2025-06-04 10:27:26] 2025-06-04 08:27:02,997 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:27:26] 2025-06-04 08:27:04,076 | INFO     | job 6677921350 has state=finished
[2025-06-04 10:27:26] 2025-06-04 08:27:04,076 | INFO     | preparing for final server update for job 6677921350 in state='finished'
[2025-06-04 10:27:26] 2025-06-04 08:27:04,077 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:27:26] 2025-06-04 08:27:04,077 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:27:26] 2025-06-04 08:27:04,077 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:27:26] 2025-06-04 08:27:04,077 | INFO     | job 6677921350 has finished - writing final server update
[2025-06-04 10:27:26] 2025-06-04 08:27:04,078 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:27:26] 2025-06-04 08:27:04,079 | INFO     | executing command: lscpu
[2025-06-04 10:27:26] 2025-06-04 08:27:04,095 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:27:26] 2025-06-04 08:27:05,501 | INFO     | monitor loop #354: job 0:6677921350 is in state 'finished'
[2025-06-04 10:27:26] 2025-06-04 08:27:05,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:27:26] 2025-06-04 08:27:07,412 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:27:26] 2025-06-04 08:27:07,412 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677921350/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:27:26] 2025-06-04 08:27:07,412 | INFO     | extracted standard info from prmon json
[2025-06-04 10:27:26] 2025-06-04 08:27:07,412 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:27:26] 2025-06-04 08:27:07,412 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:27:26] 2025-06-04 08:27:07,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:27:26] 2025-06-04 08:27:07,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:27:26] 2025-06-04 08:27:07,413 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:27:26] 2025-06-04 08:27:07,413 | INFO     | sum of square deviations: 97479037.0
[2025-06-04 10:27:26] 2025-06-04 08:27:07,413 | INFO     | sum of deviations: -579959055.5000008
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | mean x: 1749023403.5
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | mean y: 2371210.9264705884
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | -- intersect: 10408320965.449146
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | intersect: 10408320965.449146
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | chi2: 0.07041398016746517
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | -- intersect: 10408320965.449146
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | current memory leak: -5.95 B/s (using 68 data points, chi2=0.07)
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | ..............................
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | . Timing measurements:
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | . get job = 0 s
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | . initial setup = 1 s
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | . payload setup = 3 s
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | . stage-in = 0 s
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | . payload execution = 4564 s
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | . stage-out = 0 s
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | . log creation = 0 s
[2025-06-04 10:27:26] 2025-06-04 08:27:07,414 | INFO     | ..............................
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | 
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | job summary report
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | --------------------------------------------------
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | PanDA job id: 6677921350
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | task id: 45006595
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | errors: (none)
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | pilot state: finished 
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | transexitcode: 0
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | exeerrorcode: 0
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | exeerrordiag: 
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | exitcode: 0
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | exitmsg: OK
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | cpuconsumptiontime: 13048 s
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | nevents: 400
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | neventsw: 0
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | pid: 1050048
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | pgrp: 1050048
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | corecount: 3
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | event service: False
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | sizes: {0: 2405187, 2: 2405393, 10: 2405421, 4571: 2440536, 4573: 2440536, 4579: 2440706}
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | --------------------------------------------------
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | 
[2025-06-04 10:27:26] 2025-06-04 08:27:07,445 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:27:26] 2025-06-04 08:27:07,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,458 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:27:26] 2025-06-04 08:27:07,458 | INFO     | job 6677921350 has completed (purged errors)
[2025-06-04 10:27:26] 2025-06-04 08:27:07,458 | INFO     | overall cleanup function is called
[2025-06-04 10:27:26] 2025-06-04 08:27:08,464 | INFO     | --- collectZombieJob: --- 10, [1050048]
[2025-06-04 10:27:26] 2025-06-04 08:27:08,464 | INFO     | zombie collector waiting for pid 1050048
[2025-06-04 10:27:26] 2025-06-04 08:27:08,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:27:26] 2025-06-04 08:27:08,464 | INFO     | collected zombie processes
[2025-06-04 10:27:26] 2025-06-04 08:27:08,465 | INFO     | will attempt to kill all subprocesses of pid=1050048
[2025-06-04 10:27:26] 2025-06-04 08:27:08,505 | INFO     | process IDs to be killed: [1050048] (in reverse order)
[2025-06-04 10:27:26] 2025-06-04 08:27:08,528 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:27:26] 2025-06-04 08:27:08,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:27:26] 2025-06-04 08:27:08,529 | INFO     | did not find any defunct processes belonging to 1050048
[2025-06-04 10:27:26] 2025-06-04 08:27:08,530 | INFO     | did not find any defunct processes belonging to 1050048
[2025-06-04 10:27:26] 2025-06-04 08:27:08,530 | INFO     | ready for new job
[2025-06-04 10:27:26] 2025-06-04 08:27:08,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:27:26] 2025-06-04 08:27:08,531 | INFO     | **************************************
[2025-06-04 10:27:26] 2025-06-04 08:27:08,531 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:27:26] 2025-06-04 08:27:08,531 | INFO     | **************************************
[2025-06-04 10:27:26] 2025-06-04 08:27:08,531 | INFO     | 
[2025-06-04 10:27:26] 2025-06-04 08:27:08,531 | INFO     | architecture information:
[2025-06-04 10:27:26] 2025-06-04 08:27:08,532 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:27:26] 2025-06-04 08:27:08,540 | INFO     | cat /etc/os-release:
[2025-06-04 10:27:26] NAME="CentOS Linux"
[2025-06-04 10:27:26] VERSION="7 (Core)"
[2025-06-04 10:27:26] ID="centos"
[2025-06-04 10:27:26] ID_LIKE="rhel fedora"
[2025-06-04 10:27:26] VERSION_ID="7"
[2025-06-04 10:27:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:27:26] ANSI_COLOR="0;31"
[2025-06-04 10:27:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:27:26] HOME_URL="https://www.centos.org/"
[2025-06-04 10:27:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:27:26] 
[2025-06-04 10:27:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:27:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:27:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:27:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:27:26] 
[2025-06-04 10:27:26] 2025-06-04 08:27:08,540 | INFO     | **************************************
[2025-06-04 10:27:26] 2025-06-04 08:27:09,043 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 10:27:26] 2025-06-04 08:27:09,056 | INFO     | sufficient remaining disk space (329466773504 B)
[2025-06-04 10:27:26] 2025-06-04 08:27:09,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:27:26] 2025-06-04 08:27:09,057 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:27:26] 2025-06-04 08:27:09,057 | INFO     | update_server=False
[2025-06-04 10:27:26] 2025-06-04 08:27:09,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:27:26] 2025-06-04 08:27:09,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:27:26] 2025-06-04 08:27:09,057 | INFO     | aborting loop
[2025-06-04 10:27:26] 2025-06-04 08:27:09,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:27:26] 2025-06-04 08:27:09,418 | INFO     | all payload control threads have been joined
[2025-06-04 10:27:26] 2025-06-04 08:27:09,788 | INFO     | all data control threads have been joined
[2025-06-04 10:27:26] 2025-06-04 08:27:09,835 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:27:26] 2025-06-04 08:27:09,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:27:26] 2025-06-04 08:27:09,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:27:26] 2025-06-04 08:27:10,062 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:10,063 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:10,063 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:10,187 | INFO     | all job control threads have been joined
[2025-06-04 10:27:26] 2025-06-04 08:27:10,351 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:10,423 | INFO     | [payload] control thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:10,546 | INFO     | [job] validate thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:10,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:27:26] 2025-06-04 08:27:10,635 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:10,717 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:10,793 | INFO     | [data] control thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:10,991 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:11,193 | INFO     | [job] control thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:11,221 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:11,449 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:12,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:27:26] 2025-06-04 08:27:12,561 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:16,547 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:19,679 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:27:26] 2025-06-04 08:27:20,685 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:27:26] 2025-06-04 08:27:21,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140210606434112)>', '<ExcThread(monitor, started 140210121721600)>']
[2025-06-04 10:27:26] 2025-06-04 08:27:21,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:27:26] 2025-06-04 08:27:21,897 | INFO     | [monitor] control thread has ended
[2025-06-04 10:27:26] 2025-06-04 08:27:26,294 | INFO     | all workflow threads have been joined
[2025-06-04 10:27:26] 2025-06-04 08:27:26,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:27:26] 2025-06-04 08:27:26,295 | INFO     | traces error code: 0
[2025-06-04 10:27:26] 2025-06-04 08:27:26,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:27:26] 2025-06-04 08:27:26,345 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:27:26] 2025-06-04 08:27:26,348 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:27:26] 2025-06-04 08:27:26,350 [wrapper] pilotpid: 1043556
[2025-06-04 10:27:26] 2025-06-04 08:27:26,352 [wrapper] Pilot exit status: 0
[2025-06-04 10:27:26] 2025-06-04 08:27:26,359 [wrapper] pandaids: 6677921350
[2025-06-04 10:27:26] 2025-06-04 08:27:26,374 [wrapper] cleanup supervisor_pilot 1061915 1043557
[2025-06-04 10:27:26] 2025-06-04 08:27:26,376 [wrapper] Test setup, not cleaning
[2025-06-04 10:27:26] 2025-06-04 08:27:26,378 [wrapper] apfmon messages muted
[2025-06-04 10:27:26] 2025-06-04 08:27:26,381 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:27:26] 2025-06-04 08:27:26,383 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:27:26]  *** Error codes and diagnostics ***
[2025-06-04 10:27:26]     "exeErrorCode": 0,
[2025-06-04 10:27:26]     "exeErrorDiag": "",
[2025-06-04 10:27:26]     "pilotErrorCode": 0,
[2025-06-04 10:27:26]     "pilotErrorDiag": "",
[2025-06-04 10:27:26]  *** Listing of results directory ***
[2025-06-04 10:27:26] total 396564
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 10:27:26] -rwx------ 1 boinc boinc     37140 Jun  3 20:37 runpilot2-wrapper.sh
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:37 queuedata.json
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:27:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:10 run_atlas
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:10 job.xml
[2025-06-04 10:27:26] -rw-r--r-- 2 boinc boinc 214249344 Jun  4 09:10 EVNT.45006593._001707.pool.root.1
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc      6923 Jun  4 09:10 init_data.xml
[2025-06-04 10:27:26] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:10 shared
[2025-06-04 10:27:26] -rw-r--r-- 2 boinc boinc    508880 Jun  4 09:10 input.tar.gz
[2025-06-04 10:27:26] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:10 start_atlas.sh
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:10 boinc_lockfile
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc      2525 Jun  4 09:10 pandaJob.out
[2025-06-04 10:27:26] -rw------- 1 boinc boinc    986745 Jun  4 09:10 agis_schedconf.cvmfs.json
[2025-06-04 10:27:26] -rw------- 1 boinc boinc   1603667 Jun  4 09:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:27:26] drwx------ 4 boinc boinc      4096 Jun  4 09:10 pilot3
[2025-06-04 10:27:26] -rw------- 1 boinc boinc 186644351 Jun  4 10:26 HITS.45006595._042561.pool.root.1
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:26 boinc_task_state.xml
[2025-06-04 10:27:26] -rw------- 1 boinc boinc      1019 Jun  4 10:26 memory_monitor_summary.json
[2025-06-04 10:27:26] -rw------- 1 boinc boinc        95 Jun  4 10:26 pilot_heartbeat.json
[2025-06-04 10:27:26] -rw------- 1 boinc boinc    228893 Jun  4 10:26 log.45006595._042561.job.log.tgz.1
[2025-06-04 10:27:26] -rw------- 1 boinc boinc      7655 Jun  4 10:27 heartbeat.json
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:27 boinc_mmap_file
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc        27 Jun  4 10:27 wrapper_checkpoint.txt
[2025-06-04 10:27:26] -rw------- 1 boinc boinc      4429 Jun  4 10:27 pilotlog.txt
[2025-06-04 10:27:26] -rw------- 1 boinc boinc    450172 Jun  4 10:27 log.45006595._042561.job.log.1
[2025-06-04 10:27:26] -rw------- 1 boinc boinc       357 Jun  4 10:27 output.list
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:27 runtime_log
[2025-06-04 10:27:26] -rw------- 1 boinc boinc    696320 Jun  4 10:27 result.tar.gz
[2025-06-04 10:27:26] -rw------- 1 boinc boinc       659 Jun  4 10:27 t7TKDmVhlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKklKDme0tztm.diag
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc      8738 Jun  4 10:27 runtime_log.err
[2025-06-04 10:27:26] -rw-r--r-- 1 boinc boinc     21261 Jun  4 10:27 stderr.txt
[2025-06-04 10:27:26] HITS file was successfully produced:
[2025-06-04 10:27:26] -rw------- 1 boinc boinc 186644351 Jun  4 10:26 shared/HITS.pool.root.1
[2025-06-04 10:27:26]  *** Contents of shared directory: ***
[2025-06-04 10:27:26] total 392704
[2025-06-04 10:27:26] -rw-r--r-- 2 boinc boinc 214249344 Jun  4 09:10 ATLAS.root_0
[2025-06-04 10:27:26] -rw-r--r-- 2 boinc boinc    508880 Jun  4 09:10 input.tar.gz
[2025-06-04 10:27:26] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:10 start_atlas.sh
[2025-06-04 10:27:26] -rw------- 1 boinc boinc 186644351 Jun  4 10:26 HITS.pool.root.1
[2025-06-04 10:27:26] -rw------- 1 boinc boinc    696320 Jun  4 10:27 result.tar.gz
10:27:27 (1039918): run_atlas exited; CPU time 13060.846436
10:27:27 (1039918): called boinc_finish(0)

</stderr_txt>
]]>

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